| (1) AGO1.ip OTHER.mut | (1) AGO2.ip | (2) B-CELL | (1) BRAIN | (1) BREAST | (10) CELL-LINE | (1) CERVIX | (1) HEART | (1) HELA | (2) LIVER | (1) OTHER | (7) SKIN | (1) UTERUS |
| GGAAGAGCAGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGTTGCAAGGTGAGGCGGAAGGAAGTGGGAATCTGGAAGCCGCCGCGACTGGGGGAAGGGCGCGTGGCGGGTCGATTCTGGGGAATCTCAAGGCGTGACTTATCTGGATCACCCTAGACTTCCCCTAGTAGCAAGTGGCCTCTTCTCTCTTCACCTACCCCGGCGGCCCTTTAATTCCCCAACCTTCAGAGGCTTCCCCTTCTGAGGCC ...............................................................................(((((((....((((.((((((.....((.((((((...(((((((((((..(((.((((((.....)).)))))))))).)))))).)).......))))))))...)))))).))))...))))))).......................................... .............................................................................78..................................................................................................................................210...................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189785 | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR343336 | SRR343335 | SRR343337 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR040007(GSM532892) G601T. (cervix) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR189786 | SRR029131(GSM416760) MCF7. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................TCTCTTCACCTACCCCCCAG............................................ | 20 | 45.00 | 0.00 | 17.00 | 11.00 | 5.00 | - | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................GCCGCGACTGGGGGAAGGG..................................................................................................................................................... | 19 | 1 | 5.00 | 5.00 | - | - | - | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CGCAAAGAGAAGAAGGAGTTGCAAGCCA..................................................................................................................................................................................................... | 28 | 3.00 | 0.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................GTTGCAAGGTGAGGCGGAAGGAAGT....................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................GAAGGCATCGCAAAGAGAAGAAGG................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................GCGGGTCGATTCTGGC............................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TTCTCTCTTCACCTACCATG............................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................CGGAAGGAAGTGGGAATC................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................GAAGGAAGTGGGAATCTGGAAGCCG....................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................AAGGTGAGGCGGAAGGAAGTG...................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TTCTGGGGAATCTCAAGGCG.................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CGCAAAGAGAAGAAGGAGTT............................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................ACTGGGGGAAGGGCGAGGG............................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ............................AAAGAGAAGAAGGAGTTGCAAGCCAA.................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................CGCGACTGGGGGAAGGGC.................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AAAGAGAAGAAGGAGTTGCA.......................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................CCGCGACTGGGGGAAGGG..................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................ATTCCCCAACCTTCAGACA................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................ATCTGGATCACCCTAGACTTCCC..................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TTCTGGGGAATCTCAAGGCGTG................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................AAGGAGTTGCAAGGTGAGGCGGGCG............................................................................................................................................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................TTCCCCTAGTAGCAAGTG........................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GGGGGAAGGGCGCGTGCC............................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ATTCTGGGGAATCTCAAGGC................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGGGCGCGTGGCGGGGTC....................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..........................GCAAAGAGAAGAAGGAGT.............................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| .................................................................................................AGGGCGCGTGGCGGG.......................................................................................................................................... | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ..................................................................TGGGAATCTGGAAGCC........................................................................................................................................................................ | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| GGAAGAGCAGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGTTGCAAGGTGAGGCGGAAGGAAGTGGGAATCTGGAAGCCGCCGCGACTGGGGGAAGGGCGCGTGGCGGGTCGATTCTGGGGAATCTCAAGGCGTGACTTATCTGGATCACCCTAGACTTCCCCTAGTAGCAAGTGGCCTCTTCTCTCTTCACCTACCCCGGCGGCCCTTTAATTCCCCAACCTTCAGAGGCTTCCCCTTCTGAGGCC ...............................................................................(((((((....((((.((((((.....((.((((((...(((((((((((..(((.((((((.....)).)))))))))).)))))).)).......))))))))...)))))).))))...))))))).......................................... .............................................................................78..................................................................................................................................210...................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189785 | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR343336 | SRR343335 | SRR343337 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR040007(GSM532892) G601T. (cervix) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR189786 | SRR029131(GSM416760) MCF7. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................CCGCCGCGACTGGGGGGG........................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................AAAGAGAAGAAGGAGTAG............................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ...........................................................................................GGGGGAAGGGCGCGTGGA............................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................TCCCCAGAATCGACCCGCC............................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................CCCACTTCCTTCCGCCT.................................................................................................................................................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |