ID: uc003ybp.2_intron_1_0_chr8_80915416_r.5p
GENE: (1)
chr8:80942071-80942320-


(1)
AGO2.ip 		(6)
B-CELL 		(5)
BRAIN 		(21)
BREAST 		(21)
CELL-LINE 		(8)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(4)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(26)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAGAAGGTGGAGCCCGGGCGGGTGAGAGGGAGTCGCGGGAATTACGCCAACGACGCGGTGGGCGGGGTCGGGAATAGGGGCGGAGCCTGGCTTAGGAAGGGGAGCTGAGGTCCGGGGCCCAGTTTTCCGGAGTTGCGGTGCGTTGTGGCTCAGCCCTCGGCCCCTAGAATCTGTGCTTGGTGTTTTTCTTCCTTTCGTTGTCCTTT
....................................................................................................................................(((.......((..(((((.(((.....))))))))..)).((((..(((....)))..)))).)))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040017(GSM532902)
G645T. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR038856(GSM458539)
D11. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................................................................................................CTCGGCCCCTAGAATCTG.................................18113.0013.00-3.003.001.00------1.00-----1.00--------1.00--------------1.00-----------------1.00----------------------------1.00-----------------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGCCC..................................................1719.009.00--8.00---------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................AGGAAGGGGAGCTGAGGT...............................................................................................1818.008.00-------------------2.00-----------------------------------1.00-------------1.00---------1.00--------------------1.00----1.001.00----
......................................................................................................................................................................................TGCGTTGTGGCTCAGCCCT.................................................1915.005.004.00----------------------------------1.00---------------------------------------------------------------------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGCCCT.................................................1814.004.00--2.002.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TCCGGAGTTGCGGTGCGTT..............................................................1914.004.00--------2.00---------------------------------------------------------------1.00-----------------------1.00--------------
..............................................................................................................................................................................AGTTGCGGTGCGTTGTGG..........................................................1813.003.00-3.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GCGGTGCGTTGTGGCTCAGC....................................................2013.003.00--2.00---------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CTCAGCCCTCGGCCCCTA........................................1813.003.00---------------3.00-----------------------------------------------------------------------------------------------
..................................................................................................................................CTGGCTTAGGAAGGGGAG......................................................................................................1813.003.00-------------1.00------------------------2.00------------------------------------------------------------------------
.......................................................................................................................................................................................................CTCGGCCCCTAGAATCTGTG...............................2013.003.00-2.00------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................AGGAAGGGGAGCTGAGGTC..............................................................................................1913.003.00-------------------1.00-----------2.00-------------------------------------------------------------------------------
............................................................................................................................................................................................................CCCCTAGAATCTGTGCTTGG..........................2012.002.00--------------------2.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................TGCGTTGTGGCTCAGCCC..................................................1812.002.00--1.001.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GTGCGTTGTGGCTCAGCCCT.................................................2012.002.00-------------1.00-----------------------------------------------------------------------------------------1.00-------
.........................ACAGAAGGTGGAGCCCCTACAGAAGGTGG....................................................................................................................................................................................................2912.002.00-----------2.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCCTAGAATCTGTGCTTGGTGTT......................2312.002.00--------2.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CGGAGTTGCGGTGCGTTGTGG..........................................................2112.002.00----2.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CGTTGTGGCTCAGCCC..................................................1612.002.00--2.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGTGCGTTGTGGCTCAGC....................................................1912.002.00---------1.00-------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................GTGCGTTGTGGCTCAGC....................................................1712.002.00------------------------1.00--------------1.00-----------------------------------------------------------------------
......................TCTACAGAAGGTGGAGCCC.................................................................................................................................................................................................................1912.002.00----------------------------2.00----------------------------------------------------------------------------------
.........................................................................................................................................................................TCCGGAGTTGCGGTGCGT...............................................................1812.002.00-------------------------1.00----------------------------------------------------------------1.00--------------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGCCCTC................................................1912.002.00--1.001.00-----------------------------------------------------------------------------------------------------------
................................................AGGTGGAGCCCGGGCGGGAA......................................................................................................................................................................................202.000.00-------------------------------------2.00-------------------------------------------------------------------------
....................................................................................................................................................................AGTTTTCCGGAGTTGCGGTGC.................................................................2112.002.00----------------------------------2.00----------------------------------------------------------------------------
................................................................................................................................................................................TTGCGGTGCGTTGTGG..........................................................1612.002.00---------------------------2.00-----------------------------------------------------------------------------------
........................................................................................................................................TAGGAAGGGGAGCTGAGGTC..............................................................................................2012.002.00------------------------------2.00--------------------------------------------------------------------------------
........................................................................................................................................TAGGAAGGGGAGCTGAGGT...............................................................................................1912.002.00-------1.00------------------------------------------------------------------------------1.00------------------------
...............................................................................................................................................GGGAGCTGAGGTCCGGGGCCCAGTT..................................................................................2511.001.00---------------------------------------------------------------------------1.00-----------------------------------
..............TCGGAGCTTCTACAGAAGGT........................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................................................................GTGCGTTGTGGCTCAG.....................................................1611.001.00----------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TCTGTGCTTGGTGTTTTTCTTCCTTCG..........271.000.00-----------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CGGCCCCTAGAATCTG.................................1611.001.00--1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GGCCCAGTTTTCCGGAGTTGCGGTG..................................................................2511.001.00-----------------------------------------------------------------------------------------------1.00---------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGCC...................................................1611.001.00--1.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................GAGTTGCGGTGCGTTGTGG..........................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GGTGCGTTGTGGCTCAGC....................................................1811.001.00-----1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CCGGAGTTGCGGTGCGTT..............................................................1811.001.00------------------------------------1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................CGGCCCCTAGAATCTGTGCTTG...........................2211.001.00------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTAGAATCTGTGCTTGGTG........................1911.001.00-1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CGTTGTGGCTCAGCC...................................................1511.001.00---1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CCGGAGTTGCGGTGCGTTG.............................................................1911.001.00----------------------------------------------------1.00----------------------------------------------------------
....GGAGCGGCACTCGGAGCTTCTA................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00---------------------------------------------------------------------------
.......................................................................................................................................................................TTTCCGGAGTTGCGGTGCGTTGTGGCTCAGC....................................................3111.001.00----------------------------------------------------------------1.00----------------------------------------------
.GTTGGAGCGGCACTCGGAGCT....................................................................................................................................................................................................................................2111.001.00---------------------------------------------1.00-----------------------------------------------------------------
.......................................................................................................................................TTAGGAAGGGGAGCTGAGG................................................................................................1911.001.00----1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................GGGAATAGGGGCGGAGCCTGG....................................................................................................................2111.001.00----------------------------------------------------------------------------------------------1.00----------------
..............................................................................................................................................................................AGTTGCGGTGCGTTGTGGC.........................................................1911.001.00---------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................TGCGTTGTGGCTCAGCCCTCG...............................................2111.001.00--------------------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................GTTGCGGTGCGTTGTGGCT........................................................1911.001.00--------------------------------------------------------------1.00------------------------------------------------
....................................................................................................................................................................................................GCCCTCGGCCCCTAGAATCTG.................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------
..............TCGGAGCTTCTACAGAA...........................................................................................................................................................................................................................1711.001.00-------1.00-------------------------------------------------------------------------------------------------------
.......GCGGCACTCGGAGCTTCTACAGAAGGTGG......................................................................................................................................................................................................................2911.001.00-----------1.00---------------------------------------------------------------------------------------------------
...TGGAGCGGCACTCGGAGCT....................................................................................................................................................................................................................................1911.001.00-----------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................TGCGTTGTGGCTCAGCC...................................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------
.............................................................GCGGGTGAGAGGGAGCG............................................................................................................................................................................171.000.00-----------------------------------------------------------------1.00---------------------------------------------
......................................................................................................................................................................................TGCGTTGTGGCTCAGC....................................................1611.001.00---1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CTCGGCCCCTAGAATCT..................................1711.001.00-------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................GCGGTGGGCGGGGTCGGGG.....................................................................................................................................191.000.00-----------------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................AGGGGAGCTGAGGTCCGG...........................................................................................1811.001.00-----------------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGC....................................................1511.001.00--1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GAGGTCCGGGGCCCAGTTTTCCGG............................................................................2411.001.00---------------------------------------------------------------------------------------------1.00-----------------
.......................................................................................................................AGGGGCGGAGCCTGGCTTAGGAA............................................................................................................2311.001.00------------------------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................CTCGGCCCCTAGAATCTGTGCTTGGTG........................2711.001.00------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................CGGGGCCCAGTTTTCCGG............................................................................1811.001.00---------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCCTAGAATCTGTGCTTGG..........................1911.001.00-------------------------------------------------------------------------------------------------1.00-------------
.....................................................................................................................................................................................GTGCGTTGTGGCTCAGCCC..................................................1911.001.00---1.00-----------------------------------------------------------------------------------------------------------
...........................AGAAGGTGGAGCCCCTACAGAAGAC......................................................................................................................................................................................................251.000.00-----------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TTTTTCTTCCTTTCGGAC......181.000.00-----------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................TGGCTTAGGAAGGGGAG......................................................................................................1711.001.00-------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGTGCGTTGTGGCTCAGCC...................................................2011.001.00-1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GCGGTGCGTTGTGGCTCA......................................................1811.001.00------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................CCGGAGTTGCGGTGCGT...............................................................1711.001.00----------------------------------------------1.00----------------------------------------------------------------
....................................................................AGAGGGAGTCGCGGGAACGG..................................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00---------------------------------------
............................................................................................................................................................CGGGGCCCAGTTTTCCGGAGTTG.......................................................................2311.001.00--------------------------------------------------------------------------1.00------------------------------------
.........................................................................................................................................................................TCCGGAGTTGCGGTG..................................................................1511.001.00-----------------------------------------------------------------------------------------------------1.00---------
.........................................................................................................................................................................TCCGGAGTTGCGGTGAGTT..............................................................1911.001.00--------------------------------------------------------------------------------------------------1.00------------
......................................................................................................TGGGCGGGGTCGGGAATAGGGGCGGAGCCGG.....................................................................................................................311.000.00----------------------------------------------------------------------------------1.00----------------------------
.......................................................................................................................................................................................................CTCGGCCCCTAGAATCTGT................................1911.001.00-------------------------------------------------------------1.00-------------------------------------------------
..................................................................................................................................................................CCAGTTTTCCGGAGTTG.......................................................................1711.001.00------------------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................................................................GCGTTGTGGCTCAGCCCTCG...............................................2011.001.00--------------------------------1.00------------------------------------------------------------------------------
........................................................................................................................................TAGGAAGGGGAGCTGAG.................................................................................................1730.670.67----0.67----------------------------------------------------------------------------------------------------------
..................................................GTGGAGCCCGGGCGG.........................................................................................................................................................................................1530.330.33-----------------------------------------------------------------------------------------------------------0.33---

Antisense strand
CGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAGAAGGTGGAGCCCGGGCGGGTGAGAGGGAGTCGCGGGAATTACGCCAACGACGCGGTGGGCGGGGTCGGGAATAGGGGCGGAGCCTGGCTTAGGAAGGGGAGCTGAGGTCCGGGGCCCAGTTTTCCGGAGTTGCGGTGCGTTGTGGCTCAGCCCTCGGCCCCTAGAATCTGTGCTTGGTGTTTTTCTTCCTTTCGTTGTCCTTT
....................................................................................................................................(((.......((..(((((.(((.....))))))))..)).((((..(((....)))..)))).)))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040017(GSM532902)
G645T. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR038856(GSM458539)
D11. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............TTCTGTAGAAGCTCCGAG........................................................................................................................................................................................................................... 18140.0040.0018.00-1.004.002.001.004.002.00-2.001.00---1.00---2.00-------------------------------------1.001.00-----------------------------------------------------
..........GTAGAAGCTCCGAGTGC............................................................................................................................................................................................................................... 17112.0012.0011.00---------------------------------------------------------------------------------------1.00----------------------
.............ACCTTCTGTAGAAGCTCCGAG........................................................................................................................................................................................................................ 21111.0011.00-5.00--4.00--1.00---------------------1.00---------------------------------------------------------------------------------
.............TCTGTAGAAGCTCCGAG............................................................................................................................................................................................................................ 1717.007.00---4.00-1.00---------------1.00--------------------------------------------------------------------------------1.00--------
.............CCTTCTGTAGAAGCTCCGAG......................................................................................................................................................................................................................... 2017.007.004.001.00----------------------1.00-------------------------1.00------------------------------------------------------------
..........TCTGTAGAAGCTCCGAGTGC............................................................................................................................................................................................................................ 2017.007.00-1.00-2.002.002.00---------------------------------------------------------------------------------------------------------
.........GTAGAAGCTCCGAGTGCC............................................................................................................................................................................................................................... 1816.006.005.00------1.00-------------------------------------------------------------------------------------------------------
...........TTCTGTAGAAGCTCCGAGTG........................................................................................................................................................................................................................... 2016.006.00-5.00-------------------1.00-----------------------------------------------------------------------------------------
..............CTGTAGAAGCTCCGA............................................................................................................................................................................................................................. 1515.005.00--1.00--2.001.00-----------------------------------1.00--------------------------------------------------------------------
.........CTGTAGAAGCTCCGAGTGCC............................................................................................................................................................................................................................. 2015.005.00-3.00-----------------------------------------------------------------1.00------------------------1.00------------------
..............TTCTGTAGAAGCTCCGA........................................................................................................................................................................................................................... 1714.004.00-----1.00----1.00------------------------------------1.00---------------1.00-----------------------------------------------
............TTCTGTAGAAGCTCCGAGT........................................................................................................................................................................................................................... 1914.004.00------1.00-------------------------------------1.00------1.00-----------------------------------------------1.00-----------
.........ACCTTCTGTAGAAGCTCCGAGTGCC........................................................................................................................................................................................................................ 2513.003.00-2.00--------1.00----------------------------------------------------------------------------------------------------
......................................CTCCACCTTCTGTAGGGG.................................................................................................................................................................................................. 1813.003.00---2.00------------------------------------------------------------------------1.00----------------------------------
..............TCGGAGCTTCTACAGA............................................................................................................................................................................................................................ 162.000.00--------------2.00------------------------------------------------------------------------------------------------
.............CACCTTCTGTAGAAGCTCCGAG....................................................................................................................................................................................................................... 2212.002.00-2.00-------------------------------------------------------------------------------------------------------------
........CTGTAGAAGCTCCGAGTGCCG............................................................................................................................................................................................................................. 2112.002.00----2.00----------------------------------------------------------------------------------------------------------
.........TTCTGTAGAAGCTCCGAGTGCC........................................................................................................................................................................................................................... 2212.002.00-1.00-1.00-----------------------------------------------------------------------------------------------------------
.........TCTGTAGAAGCTCCGAGTGCC............................................................................................................................................................................................................................ 2112.002.00--------------------------2.00------------------------------------------------------------------------------------
.............CTTCTGTAGAAGCTCCGAG.......................................................................................................................................................................................................................... 1912.002.002.00--------------------------------------------------------------------------------------------------------------
..............CCACCTTCTGTAGAAGCTCCGA...................................................................................................................................................................................................................... 2212.002.00----------------2.00----------------------------------------------------------------------------------------------
...........TCTGTAGAAGCTCCGAGTG............................................................................................................................................................................................................................ 1912.002.00-1.00----1.00--------------------------------------------------------------------------------------------------------
.......ACCTTCTGTAGAAGCTCCGAGTGCCGC........................................................................................................................................................................................................................ 2712.002.00------1.00-------------------------------------------------------------1.00------------------------------------------
............ACCTTCTGTAGAAGCTCCGAGT........................................................................................................................................................................................................................ 2212.002.00------------1.00---------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CCCTCGGCCCCTAGATTT................................... 181.000.00-----------------------------------------------------------1.00---------------------------------------------------
.....................................ACCTTCTGTAGGGGC...................................................................................................................................................................................................... 1521.001.00--0.500.50-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................CCTCGGCCCCTAGAATTA.................................. 181.000.00--------------------------------------------------------------------------------------------------------1.00------
.........................................................................................................................................................................................................CGGCCCCTAGAATCTGCGGG............................. 2011.000.00-----------------------------------------------------------------------------1.00---------------------------------
................CTCCACCTTCTGTAGAAGCTCC.................................................................................................................................................................................................................... 2211.001.00-----1.00---------------------------------------------------------------------------------------------------------
............................GTAGGGGCTCCACCTTC............................................................................................................................................................................................................. 1711.001.00-------------------------------------------1.00-------------------------------------------------------------------
..................CCTTCTGTAGGGGCTCCACCTTCTGTAGAAGCT....................................................................................................................................................................................................... 3311.001.00---------------------------------1.00-----------------------------------------------------------------------------
......................................................................................CACCGCGTCGTTGGCGTA.................................................................................................................................................. 1811.001.00------1.00--------------------------------------------------------------------------------------------------------
.....................................TCCACCTTCTGTAGGGGC................................................................................................................................................................................................... 1811.001.00---1.00-----------------------------------------------------------------------------------------------------------
....ACCTTCTGTAGAAGCTCCGAGTGCCGCTCC........................................................................................................................................................................................................................ 3011.001.00-----1.00---------------------------------------------------------------------------------------------------------
......................GCTCCACCTTCTGTAGA................................................................................................................................................................................................................... 1711.001.00-----------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................CCTCGGCCCCTAGAATTG.................................. 181.000.00------------------------------------1.00--------------------------------------------------------------------------
.............TCCACCTTCTGTAGAAGCTCCGAG..................................................................................................................................................................................................................... 2411.001.00-1.00-------------------------------------------------------------------------------------------------------------
..........CTGTAGAAGCTCCGAGTGC............................................................................................................................................................................................................................. 1911.001.00-1.00-------------------------------------------------------------------------------------------------------------
............ACTCGGAGCTTCTACAGTCC.......................................................................................................................................................................................................................... 201.000.00-1.00-------------------------------------------------------------------------------------------------------------
.............CTCCACCTTCTGTAGAAGCTCCGAG.................................................................................................................................................................................................................... 2511.001.00------------------------------------------------------------------------------1.00--------------------------------
......CCTTCTGTAGAAGCTCCGAGTGCCGCT......................................................................................................................................................................................................................... 2711.001.00---------------------------------1.00-----------------------------------------------------------------------------
..........CCTTCTGTAGAAGCTCCGAGTGC......................................................................................................................................................................................................................... 2311.001.00----1.00----------------------------------------------------------------------------------------------------------
..............CCTTCTGTAGAAGCTCCGA......................................................................................................................................................................................................................... 1911.001.00---1.00-----------------------------------------------------------------------------------------------------------
..........TTCTGTAGAAGCTCCGAGTGC........................................................................................................................................................................................................................... 2111.001.00-------------------------------------------------------------------------------------1.00-------------------------
..........ACCTTCTGTAGAAGCTCCGAGTGC........................................................................................................................................................................................................................ 2411.001.00-----------------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................CCTGGCTTAGGAAGGGA........................................................................................................ 171.000.00--------------------------------------------------------------------------------1.00------------------------------
.................................................................................................CGCGGTGGGCGGGGTAGG....................................................................................................................................... 181.000.00-----------------------------------------1.00---------------------------------------------------------------------
...............TTCTGTAGAAGCTCCG........................................................................................................................................................................................................................... 1621.001.00--0.50---0.50--------------------------------------------------------------------------------------------------------
..............ACCTTCTGTAGAAGCTCCGA........................................................................................................................................................................................................................ 2011.001.00------------------------------------------------------1.00--------------------------------------------------------
...............CGGAGCTTCTACAGAACG......................................................................................................................................................................................................................... 181.000.001.00--------------------------------------------------------------------------------------------------------------
........TCTGTAGAAGCTCCGAGTGCCG............................................................................................................................................................................................................................ 2211.001.00---------------------1.00-----------------------------------------------------------------------------------------
................CCTTCTGTAGAAGCTCC......................................................................................................................................................................................................................... 1711.001.00-----1.00---------------------------------------------------------------------------------------------------------
.............CTCGGAGCTTCTACAGAAAT......................................................................................................................................................................................................................... 201.000.001.00--------------------------------------------------------------------------------------------------------------
........ACCTTCTGTAGAAGCTCCGAGTGCCG........................................................................................................................................................................................................................ 2611.001.00------------------------------------------------------------1.00--------------------------------------------------
.........CTTCTGTAGAAGCTCCGAGTGCC.......................................................................................................................................................................................................................... 2311.001.00----------------------------------------------------------------------1.00----------------------------------------
.............TGTAGAAGCTCCGAG.............................................................................................................................................................................................................................. 1511.001.00-------------------------------------------------------------------------------------------1.00-------------------
....CCTTCTGTAGAAGCTCCGAGTGCCGCTCC......................................................................................................................................................................................................................... 2911.001.00-------1.00-------------------------------------------------------------------------------------------------------
...............................CTGTAGGGGCTCCACC........................................................................................................................................................................................................... 1640.500.50-----0.50---------------------------------------------------------------------------------------------------------
....................CCACCTTCTGTAGAAG...................................................................................................................................................................................................................... 1630.330.33---------------------------------------0.33-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................AAAGGACAACGAAAG 1530.330.33------------------------------------------------------------------------------------------------------------0.33--
..........................................................................................................................................................................................................................................AAGGACAACGAAAGG. 1540.250.25----------------------------------------0.25----------------------------------------------------------------------
..........................................................................................................................................................................................................................................CCTTTCGTTGTCCTTCTTA 190.250.00-------------------------------------------------------------------------------------------------------------0.25-
....................................................................................................CCCGACCCCGCCCACC...................................................................................................................................... 1650.200.20--------------------------------------------------------------------------------------------------------------0.20
................TTCTGTAGAAGCTCC........................................................................................................................................................................................................................... 1550.200.20-----0.20---------------------------------------------------------------------------------------------------------