ID: uc003yae.2_intron_2_0_chr8_75157411_r.3p
GENE: (3)
chr8:75157361-75157610-


(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
BRAIN 		(1)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(3)
HELA 		(3)
LIVER 		(2)
OTHER 		(2)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
CCAGAACTGTTTAGATTCTGTATTATCTTAAAAGCAGCCTTTCCATAATAAATAAACTTTTCCCCAGAGAATGAAATATGTGTTTAGTCAAAGCCTTATGAATATATTATTTTTAAAAGAGAAAAGGTTAATCTGATTTAGCAAAATATATGTATATATACCTCCTTTCTTTTTTTCTTTTTTCTTTTTTTTTTGGCCAGGCCCTGATTACGTCAAACAGAGATTTCAGGAAGGTGTAGATGCTAAAGAA
..................................................................................................................(((((((((((((((((......)))))...(((((....))))).................))))))))))))..............................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189785GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCAAG....................................................31201.000.00109.0086.00--4.002.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCAAG.....................................................3088.000.0041.0038.001.00-4.002.002.00----------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTAGGC.......................................................2618.000.00--8.0010.00-------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTTCAAG....................................................3018.000.009.008.00---1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTCAAG......................................................2917.000.009.008.00---------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTAAAG....................................................2915.000.005.004.00--4.002.00-----------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTAGGC.......................................................2513.000.00--9.004.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCAA.....................................................309.000.001.008.00---------------------------
......................................................................................................................................................................................................................................AAGGTGTAGATGCTAAAGA.1917.007.00-------6.00----1.00----------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCAAG.....................................................296.000.001.003.00--1.001.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCAAT....................................................315.000.003.002.00---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCAA......................................................295.000.002.002.00---1.00-----------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTTTTACC.....................................................275.000.00--3.001.00--1.00----------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTTTTGGC.....................................................2714.004.00--3.001.00-------------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTTTTTTAATG...............................................................244.000.001.003.00---------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTCAGG................................................................244.000.00--4.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTAGGC.......................................................284.000.00--4.00--------------------------
................................................................................................................................................................CCTCCTTTCTTTTTTTCTTTTTTCTTTTTTTTAAG.......................................................354.000.002.002.00---------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTG...........................................................273.000.001.00----2.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTCTTG.......................................................283.000.00-1.00--1.001.00-----------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCCC...................................................213.000.00--3.00--------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTTGGC.....................................................2913.003.00--3.00--------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTTAAAG....................................................303.000.002.00---1.00------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTTGGTT....................................................303.000.00--2.001.00-------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGC.....................................................2812.002.00--1.001.00-------------------------
.......................................................................................................................................................................................................................AACAGAGATTTCAGGAAGGTGTAGATGC.......2812.002.00---------1.00---------1.00---------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTGGTT...........................................................242.000.00--2.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTCG.......................................................302.000.00---2.00-------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTACC.....................................................282.000.00--2.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCCC......................................................292.000.00--2.00--------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCTTTTTTTTG.........................................................312.000.002.00----------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCTC.....................................................302.000.00--1.001.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTCAT..............................................................222.000.00-------------2.00---------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTACCG....................................................262.000.00-----2.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTAAAG....................................................312.000.002.00----------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGAGG...................................................242.000.00---2.00-------------------------
................................................................................................................................................................................................................................TTCAGGAAGGTGTAGATGCTAAAG..2412.002.00-----------2.00-----------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTGGAAG...................................................272.000.00---2.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTAGGC.......................................................292.000.00--1.001.00-------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGTTTT..................................................252.000.00--1.001.00-------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGCTTT...................................................302.000.00--2.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCAAA....................................................312.000.002.00----------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCAG.....................................................302.000.00--1.00---1.00----------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTAAAG.....................................................292.000.00-1.00--1.00------------------------
......................................................................................................................................................................................................................AAACAGAGATTTCAGGAAGGTGTAGATG........2812.002.00-------2.00---------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTCAG.........................................................292.000.001.00---1.00------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTAGGC.......................................................272.000.00--2.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTCGAG...........................................................242.000.00--2.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTAGT.....................................................322.000.00--2.00--------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTAAAG.......................................................272.000.00----1.001.00-----------------------
..........................................................................................................................................................................................................................AGAGATTTCAGGAAGGTGTAGAT.........2312.002.00--------1.00----------------1.00---
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCCAG...............................................................232.000.00-----2.00-----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTAG..................................................232.000.00--1.001.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCCAG....................................................312.000.001.00---1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCGGC...............................................................222.000.00--2.00--------------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCTAG..................................................222.000.00---2.00-------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGCC...................................................222.000.00--1.001.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTCAAA......................................................292.000.002.00----------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCGGAG..............................................................202.000.00--2.00--------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCTTTTTTTAGG........................................................322.000.00--2.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTGGTT....................................................3141.750.50--1.75--------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTGGC.....................................................2531.671.67--1.000.67-------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTTTTTG.......................................................3131.331.331.000.33---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTCCAG.......................................................281.000.00-----1.00-----------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTATA..........................................................261.000.00------1.00----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGACTC..................................................231.000.00---1.00-------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTGAC.................................................241.000.00--1.00--------------------------
.............................................................................................................................................................................TTTCTTTTTTCTTTTTTTTTTGGGAC...................................................261.000.00--1.00--------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTTCTC........................................................301.000.00--1.00--------------------------
.................................................................................................................................................................CTCCTTTCTTTTTTTCTATTT....................................................................211.000.00------1.00----------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTCCT...........................................................271.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTCGAG.....................................................311.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTAGG........................................................271.000.00--1.00--------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTATTG.....................................................291.000.00----1.00------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTAAC..........................................................261.000.00---1.00-------------------------
.............................................................................................................................................................................TTTCTTTTTTCTTTTTTTTTTGTTGG...................................................261.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCTTG....................................................311.000.00-1.00---------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTCC.......................................................291.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTAGTG....................................................311.000.00--1.00--------------------------
..............................................................................................................................................................TACCTCCTTTCTTTTTTTTTG.......................................................................211.000.00-1.00---------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTTGCG.....................................................311.000.001.00----------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTGGG............................................................261.000.00---1.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTCCG........................................................271.000.00-----1.00-----------------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTGGCGCCG.................................................221.000.00-1.00---------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGCTG..................................................231.000.00---1.00-------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTCTGG.............................................................241.000.00--1.00--------------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTTTTTTCG.................................................................221.000.00----1.00------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCTTG.....................................................291.000.00----1.00------------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTTTTGGCAGAG.................................................3111.004.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTAGC.......................................................281.000.00--1.00--------------------------
.........................................................................................................................................................................................................................CAGAGATTTCAGGAAGGTGTAGAT.........2411.001.00--------1.00--------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGT....................................................211.000.00---1.00-------------------------
...........................................................................................................................................................................TTTTTCTTTTTTCTTTTTTTTTTAACG....................................................271.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTCTG.........................................................281.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCTG.....................................................301.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTGGTT........................................................271.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTGAGC........................................................271.000.00---1.00-------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCGGAC.................................................241.000.00--1.00--------------------------
................................................................................................................................................................CCTCCTTTCTTTTTTTCTTTTTAAG.................................................................251.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTCTTG.......................................................301.000.00----1.00------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCCTG...............................................................231.000.00----------------1.00------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCCAGC.................................................231.000.00---1.00-------------------------
...............................................................................................................................................................ACCTCCTTTCTTTTTTTCTTTTTCT..................................................................251.000.00---1.00-------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTCAGC.......................................................271.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTCGAG...........................................................251.000.00--1.00--------------------------
................................................................................................................................................................................CTTTTTTCTTTTTTTTTTGGACC...................................................231.000.00---1.00-------------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTTTTCCTC.................................................................221.000.00------1.00----------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCTA......................................................281.000.00-----1.00-----------------------
..............................................................................................................................................................................................................................ATTTCAGGAAGGTGTAGA..........1811.001.00---------1.00-------------------
.....................................................................................................................................................................................TTCTTTTTTTTTTGGCTATG.................................................201.000.00--1.00--------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCG.................................................................211.000.00----1.00------------------------
..........................................................................................................................................................................................................................AGAGATTTCAGGAAGGTGT.............1911.001.00--------------1.00--------------
.......................................................................................................................................................................................................................AACAGAGATTTCAGGAAGGTGTAGATGCTA.....3011.001.00--------------------1.00--------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTTTGC....................................................331.000.00--1.00--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGC....................................................211.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTCTCG.........................................................271.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTAAAG......................................................291.000.00-----1.00-----------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTCTG..........................................................271.000.00----1.00------------------------
........................................................................................................................................................................................................................ACAGAGATTTCAGGAAGGTGTAGA..........2411.001.00------------1.00----------------
................................................................................................................................................................................................................................TTCAGGAAGGTGTAGATGCTAAAGA.2511.001.00-----------------------1.00-----
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTAG..................................................................221.000.00----1.00------------------------
.....................................................................................................................................................................................TTCTTTTTTTTTTGGCCC...................................................181.000.00---1.00-------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTACA.....................................................251.000.001.00----------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTCTAT...........................................................241.000.00------1.00----------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGCCC...................................................241.000.00--1.00--------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTCAG.............................................................211.000.00-1.00---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTAAAG..........................................................251.000.00-----1.00-----------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTTTTTTCTTTTTTTTTTG.......................................................3211.001.00-1.00---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTCGGT...........................................................241.000.00--1.00--------------------------
..........................................................................................................................................................................................................................AGAGATTTCAGGAAGGTGTAGATGCTA.....2711.001.00------------------1.00----------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTAG.............................................................251.000.00----1.00------------------------
..............................................................................................................................................................................TTCTTTTTTCTTTTTTTTTTATC.....................................................231.000.00---1.00-------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTTTCG........................................................301.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTGGGC.............................................................221.000.00--1.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTAAAG.........................................................281.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCAAT.....................................................301.000.00-1.00---------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTACTG....................................................261.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCCA......................................................291.000.00-----1.00-----------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGGCC...................................................211.000.00--1.00--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGTTGC..................................................251.000.00--1.00--------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTCCAG.........................................................291.000.00----1.00------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCCTTG..............................................................261.000.00-----1.00-----------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCGGTA..............................................................221.000.00--1.00--------------------------
...............................................................................................................................................................................................................................TTTCAGGAAGGTGTAGATGCTAA....2311.001.00------------------------1.00----
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTGAGG...........................................................231.000.001.00----------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTGGC.................................................241.000.00---1.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTCTGC............................................................241.000.00--1.00--------------------------
................................................................................................................................................................................CTTTTTTCTTTTTTTTTTGGGA....................................................221.000.00--1.00--------------------------
...................................................................................................................................................................................................................GTCAAACAGAGATTTCAGGAAGGTGTAGA..........2911.001.00--------1.00--------------------
....................................................................................................................................................................................TTTCTTTTTTTTTTGGCCAGGG................................................221.000.00---1.00-------------------------
.....................................................................................................................................................................................TTCTTTTTTTTTTGGCGCGC.................................................201.000.00--1.00--------------------------
................................................................................................................................................................CCTCCTTTCTTTTTTTCTTTTTTTAA................................................................261.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTGCT.....................................................301.000.00--1.00--------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTGGCCCGTC................................................301.000.001.00----------------------------
.........................................................................................................................................................ATATATACCTCCTTTCTTTTTTTTTTG......................................................................271.000.00----1.00------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGAGGG..................................................251.000.00--1.00--------------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTAAAG....................................................................191.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTCTA..........................................................271.000.00--1.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTCG..............................................................231.000.00----1.00------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTTCAG.....................................................311.000.00-----1.00-----------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCGG................................................................221.000.00--1.00--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGGACT..................................................251.000.00---1.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTAG.............................................................231.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTACA...........................................................261.000.00---1.00-------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCG.......................................................271.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTGGC..............................................................211.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTCAG..............................................................221.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTCAAT.......................................................281.000.00-1.00---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTAATG......................................................291.000.00------1.00----------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTTATTG....................................................301.000.00-1.00---------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTGG.............................................................231.000.00---1.00-------------------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTGGCGCAG.................................................221.000.00--1.00--------------------------
..................................................................................................................AAAAGAGAAAAGGTTTGG......................................................................................................................181.000.00---------------------------1.00-
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCAA......................................................281.000.001.00----------------------------
........................................................................................................................................................................................................................ACAGAGATTTCAGGAAGGTGTAGATGCT......2811.001.00--------------------------1.00--
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTCTTG............................................................221.000.00----1.00------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTGAGG............................................................221.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTGTGG.........................................................261.000.00--1.00--------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTTTTTCTG.........................................................291.000.00-----1.00-----------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTCCA............................................................241.000.00----1.00------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCTTTTTTTTTTTG......................................................341.000.00-----1.00-----------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTTCG.....................................................321.000.00-1.00---------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGTGG..................................................231.000.00---1.00-------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGGACG..................................................251.000.00--1.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTCG.........................................................281.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTAAG.........................................................261.000.00-1.00---------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCACA.....................................................301.000.00-1.00---------------------------
..............................................................................................................................................................................TTCTTTTTTCTTTTTTTTTTGGTGG...................................................251.000.00---1.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTCTGG.......................................................281.000.00--1.00--------------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCTTGA.................................................231.000.00---1.00-------------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTTTTGGCC....................................................2811.001.00--1.00--------------------------
.................................................................................................................................................................CTCCTTTCTTTTTTTCGCT......................................................................191.000.00----------1.00------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTCAG.....................................................321.000.00----1.00------------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCGGC..................................................221.000.00--1.00--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGGAG..................................................231.000.00---1.00-------------------------
.................................................................................................................................................................CTCCTTTCTTTTTTTCTTTGGC...................................................................221.000.00--1.00--------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTAAG.............................................................251.000.00----1.00------------------------
................................................................................................................................................................CCTCCTTTCTTTTTTTCTTTCTG...................................................................231.000.001.00----------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTCTAG.............................................................221.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTCGGC...........................................................241.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTCTGG.............................................................221.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTGGT..........................................................251.000.00--1.00--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGCTTG...................................................301.000.00--1.00--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTACTG....................................................231.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTAATT.........................................................281.000.00------1.00----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGGTC...................................................221.000.00---1.00-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCGGTT..............................................................211.000.00--1.00--------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTAACG....................................................261.000.00-1.00---------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTCTTG.........................................................271.000.00----1.00------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGTTGG..................................................251.000.00--1.00--------------------------
................................................................................................................................................................................CTTTTTTCTTTTTTTTTTGGTCG...................................................231.000.00--1.00--------------------------
...........................................................................................................................................................................TTTTTCTTTTTTCTTTTTTTTTTATAT....................................................271.000.00-----1.00-----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTGCG.................................................241.000.00---1.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTATTC.......................................................291.000.00-----1.00-----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCCAGGC................................................2511.001.00--1.00--------------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGGTAT..................................................221.000.00---1.00-------------------------
........................................................................................................................................................................CTTTTTTTCTTTTTTCTTTTTTTTTCTC......................................................281.000.00--1.00--------------------------
..........................................................................................................................................................................TTTTTTCTTTTTTCTTTTTTTTTTGGACG...................................................291.000.00--1.00--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTCAG.................................................241.000.00---1.00-------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTATC.........................................................281.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCGG................................................................201.000.00--1.00--------------------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTGGCTAG..................................................211.000.00---1.00-------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTCCC............................................................241.000.00------1.00----------------------
.....................................................................................................................................................................................TTCTTTTTTTTTTGGCTAGA.................................................201.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTAC.......................................................281.000.00--1.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTCG......................................................311.000.00----1.00------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTCTAG.............................................................251.000.00-----1.00-----------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCTCGC.................................................231.000.00--1.00--------------------------
.................................................................................................................................................................CTCCTTTCTTTTTTTCTTTTTTTAAG...............................................................261.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTCAG.............................................................221.000.001.00----------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTCCG.....................................................321.000.00-----1.00-----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGAGTC..................................................231.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTGGTT.........................................................261.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTTCTTG....................................................321.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTCAG..............................................................211.000.00-----1.00-----------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTGGAG............................................................241.000.00---1.00-------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTAACG....................................................231.000.00----1.00------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTCCG.......................................................281.000.00-----1.00-----------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTAACG...............................................................251.000.00-----1.00-----------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTCGAG.....................................................301.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTCGG.............................................................221.000.00--1.00--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTAGCG.......................................................261.000.00--1.00--------------------------
...................................................................................................................................................................CCTTTCTTTTTTTCTAG......................................................................171.000.00----1.00------------------------
..................................................................................................................................................................................................................CGTCAAACAGAGATTTCAGGAAGGTGTAGA..........3011.001.00--------1.00--------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTTTTTTTAG....................................................331.000.00-----1.00-----------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTTGCTTC...................................................331.000.00--1.00--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCCAGGGCC..............................................271.000.00--1.00--------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTGTGA........................................................291.000.00-1.00---------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTTTCCC.........................................................281.000.00--1.00--------------------------
......................................................................................................................................................................TTCTTTTTTTCTTTTTTCTTTTTTTTTTAC......................................................301.000.00--1.00--------------------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTGGCTTGT.................................................231.000.00---1.00-------------------------
...........................................................................................................................................................................................................................GAGATTTCAGGAAGGTGTAGATGCT......2511.001.00----------------------1.00------
................................................................................................................................................................CCTCCTTTCTTTTTTTCTTTTTTAAG................................................................261.000.00----1.00------------------------
.....................................................................................................................................................................TTTCTTTTTTTCTTTTTTCTTTTAAG...........................................................261.000.00-----1.00-----------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTGGGGC...................................................271.000.00---1.00-------------------------
....................................................................................................................................................................................TTTCTTTTTTTTTTGGCCTGAC................................................221.000.00---1.00-------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCTGG..................................................231.000.00--1.00--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTCTAG....................................................311.000.001.00----------------------------
....................................................................................................................................................................CTTTCTTTTTTTCTTTTTTCTTCAG.............................................................251.000.00-----1.00-----------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCCAG..................................................2320.500.50---0.50-------------------------
................................................................................................................................................................................CTTTTTTCTTTTTTTTTTGGC.....................................................2180.500.50--0.120.38-------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTGG......................................................2940.500.50--0.50--------------------------
...........................................................................................................................................................................TTTTTCTTTTTTCTTTTTTTTTTGGC.....................................................2620.500.50--0.50--------------------------
............................................................................................................................................................................TTTTCTTTTTTCTTTTTTTTTTGGCTG...................................................2730.331.67--0.33--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCC....................................................2160.330.33--0.170.17-------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGG......................................................2770.290.29--0.29--------------------------
...............................................................................................................................................................ACCTCCTTTCTTTTTTTC.........................................................................1840.250.25----------------------------0.25
.............................................................................................................................................................................TTTCTTTTTTCTTTTTTTTTTGGC.....................................................2440.250.25--0.25--------------------------
.......................................................................................................................................................................TCTTTTTTTCTTTTTTCTTTTTTTTTTGGTTAA..................................................3340.250.50--0.25--------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCTTT...............................................................2550.200.20--0.20--------------------------
..................................................................................................................................................................TCCTTTCTTTTTTTCTTTTTTCTTTG..............................................................2650.200.20---0.20-------------------------
..............................................................................................................................................................................TTCTTTTTTCTTTTTTTTTTGGCC....................................................2450.200.20--0.20--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGCAGAG.................................................2660.170.17--0.17--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGC.....................................................2260.170.17--0.17--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGCT....................................................2360.170.17---0.17-------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGCTAG..................................................2560.170.17--0.17--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCCC...................................................2260.170.33--0.17--------------------------
...............................................................................................................................................................................TCTTTTTTCTTTTTTTTTTGGCTTG..................................................2560.170.17---0.17-------------------------
..............................................................................................................................................................................TTCTTTTTTCTTTTTTTTTTGGCTATG.................................................2760.170.17--0.17--------------------------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGCCTCG.................................................2460.170.33---0.17-------------------------
..............................................................................................................................................................................TTCTTTTTTCTTTTTTTTTTGGC.....................................................2360.170.17--0.17--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGTA....................................................2970.140.29--0.14--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGT.....................................................2870.140.29---0.14-------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGTAG...................................................3070.140.29--0.14--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGTT....................................................2970.140.29--0.14--------------------------
.........................................................................................................................................................................TTTTTTTCTTTTTTCTTTTTTTTTTGGACG...................................................3070.140.29---0.14-------------------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTGGCC....................................................1980.120.12--0.12--------------------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTGGCCC...................................................2080.120.12--0.12--------------------------
................................................................................................................................................................................CTTTTTTCTTTTTTTTTTGGCTG...................................................2380.120.50---0.12-------------------------

Antisense strand
CCAGAACTGTTTAGATTCTGTATTATCTTAAAAGCAGCCTTTCCATAATAAATAAACTTTTCCCCAGAGAATGAAATATGTGTTTAGTCAAAGCCTTATGAATATATTATTTTTAAAAGAGAAAAGGTTAATCTGATTTAGCAAAATATATGTATATATACCTCCTTTCTTTTTTTCTTTTTTCTTTTTTTTTTGGCCAGGCCCTGATTACGTCAAACAGAGATTTCAGGAAGGTGTAGATGCTAAAGAA
..................................................................................................................(((((((((((((((((......)))))...(((((....))))).................))))))))))))..............................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189785GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
..................................CAGCCTTTCCATAATGGTC..................................................................................................................................................................................................... 191.000.00------1.00----------------------
.........................................................................................................................................................................................TTTTTTTTTGGCCAGGTACG............................................. 201.000.00----------1.00------------------
.................................................................................................................................................................................................................ACGTCAAACAGAGATTCCT...................... 191.000.00---------------1.00-------------
............................................................................................................................................................TATACCTCCTTTCTTTATA........................................................................... 191.000.00--------------1.00--------------
............................................................................................................................................................TATACCTCCTTTCTTGGTC........................................................................... 191.000.00-----------------1.00-----------
.................................................................................................................................................................................TTTTTTCTTTTTTTTTTGGACTC.................................................. 231.000.00---------------------1.00-------