ID: uc003xtk.2_intron_3_0_chr8_59171836_r
GENE: (4)
chr8:59171786-59172356-


(1)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(2)
HEART
(1)
LIVER
(5)
OTHER
(3)
SKIN

Sense strand
TGATGGAATCCAATCTTCTTTGGCGGGGAAAATAAATGAAGCCAACACCAGTAGGTATAAGAGAGATACAGAGTTGTAGCTGTGTCAAAACTCTGTTTCCCCTTGTTCTTGAAGTCCATATATGTGTTTGCCCTGTCTATGATTCAGTTTGATTGTATGCCCTGCCCTTTTCTTTGATCATATGGGATGCCCCAATGTGGTCTTTTTAGCAAATTCCCCTCTTTTATTGCCAACTACATAGAGCTGTTTTAGTTCCTTGGTGTATGTATTCAATTGTATTATTGTCACTATTTTTCACTCCTTCCTTTGAACAAAATATTTATTTATACACTTCACCATATGACTTGCCTTCTTTCTGATACGGAATGCACATCCCTGCTCCATTGACTTTGAGCTTAGCCATATGATTCATGTAGGTCAAATGTCATGTCAGAAATGATGGGGTGGCAGTTTGAGCAGAATCTTCAAGAAGCAGTATGCATTTCTACCACTATTCTTGCATTTCTCCCCTCCCTCATAAGGACAACATATATCAAGCAGGGGCCATTGCTCCAGCCTGACTCCAGGAATC
.............................................................................................................................((...(((....(((((.((((...((..(((.....)))...))...))))))))).)))..)).............................................................................................................................................................................................................................................................................................................................................................................................
..................................................................................................................115..........................................................................192.........................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR343334SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343336SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................................................TCTTTGATCATATGGATC...............................................................................................................................................................................................................................................................................................................................................................................................1876.000.0076.00--------------------
..........................................................................................................................................................................TCTTTGATCATATGGAATC..............................................................................................................................................................................................................................................................................................................................................................................................1924.000.0024.00--------------------
.......................................................................................................................ATATGTGTTTGCCCTGTGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------1.00-------
.....................................................................AGAGTTGTAGCTGTGTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------1.00-----
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTCTCCCCTCCTAG.......................................................191.000.00------------1.00--------
..................................................................................................................................................................TGCCCTTTTCTTTGATCGCCC....................................................................................................................................................................................................................................................................................................................................................................................................211.000.00------------------1.00--
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATATCAAGCAGGGGCCATTGC.....................2511.001.00-----------------1.00---
...............................................CCAGTAGGTATAAGAGAGATACAGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----------1.00----------
.....................................................................................................................................................................................................................................................................................................................................ATACACTTCACCATATG.....................................................................................................................................................................................................................................1720.500.50-------------------0.50-

Antisense strand
TGATGGAATCCAATCTTCTTTGGCGGGGAAAATAAATGAAGCCAACACCAGTAGGTATAAGAGAGATACAGAGTTGTAGCTGTGTCAAAACTCTGTTTCCCCTTGTTCTTGAAGTCCATATATGTGTTTGCCCTGTCTATGATTCAGTTTGATTGTATGCCCTGCCCTTTTCTTTGATCATATGGGATGCCCCAATGTGGTCTTTTTAGCAAATTCCCCTCTTTTATTGCCAACTACATAGAGCTGTTTTAGTTCCTTGGTGTATGTATTCAATTGTATTATTGTCACTATTTTTCACTCCTTCCTTTGAACAAAATATTTATTTATACACTTCACCATATGACTTGCCTTCTTTCTGATACGGAATGCACATCCCTGCTCCATTGACTTTGAGCTTAGCCATATGATTCATGTAGGTCAAATGTCATGTCAGAAATGATGGGGTGGCAGTTTGAGCAGAATCTTCAAGAAGCAGTATGCATTTCTACCACTATTCTTGCATTTCTCCCCTCCCTCATAAGGACAACATATATCAAGCAGGGGCCATTGCTCCAGCCTGACTCCAGGAATC
.............................................................................................................................((...(((....(((((.((((...((..(((.....)))...))...))))))))).)))..)).............................................................................................................................................................................................................................................................................................................................................................................................
..................................................................................................................115..........................................................................192.........................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR343334SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343336SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................................................TCTTTGATCATATGGCCA............................................................................................................................................................................................................................................................................................................................................................................................... 1862.000.00-16.0016.00-19.008.00-3.00-------------
..........................................................................................................................................................................TCTTTGATCATATGGCC................................................................................................................................................................................................................................................................................................................................................................................................ 1753.000.00-22.008.0023.00-----------------
..........................................................................................................................................................................TCTTTGATCATATGGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................. 195.000.005.00--------------------
..........................................................................................................................................................................TCTTTGATCATATGGTC................................................................................................................................................................................................................................................................................................................................................................................................ 174.000.004.00--------------------
...................................................................................................................................................................................................................................................................................GTATTATTGTCACTATG....................................................................................................................................................................................................................................................................................... 173.000.00------3.00--------------
..........................................................................................................................................................................TCTTTGATCATATGGCCAA.............................................................................................................................................................................................................................................................................................................................................................................................. 193.000.00-1.002.00------------------
..........................................................................................................................................................................TCTTTGATCATATGGCT................................................................................................................................................................................................................................................................................................................................................................................................ 171.000.00-1.00-------------------
...................................................................................................................................................................................................................................................................................................TTTTCACTCCTTCCTTTAAC.................................................................................................................................................................................................................................................................... 201.000.00--------------1.00------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCCTGACTCCGCT.... 191.000.00-----------1.00---------
...........................................................................................................................................................................................................TTTTAGCAAATTCCCCTCG............................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------1.00------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCTCCCCTCCCTTTG..................................................... 191.000.00---------1.00-----------
..........................................................................................................................................................................................................................................................................................................................................................GCCTTCTTTCTGATATTAA.............................................................................................................................................................................................................. 191.000.00----------------1.00----
....................................TGAAGCCAACACCAGTGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--------1.00------------
.........................................................................................................................................................................TTCTTTGATCATATGGC................................................................................................................................................................................................................................................................................................................................................................................................. 170.330.00---0.33-----------------
.....CCAAAGAAGATTGGATTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1830.330.33--------------------0.33
.........................................................................................................................................................................CCATATGATCAAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................. 1630.330.33---0.33-----------------