| (1) BRAIN | (9) CELL-LINE | (1) FIBROBLAST | (1) KIDNEY | (1) OTHER | (4) SKIN |
| CAGCCTGTCTTACTAGCTAATAGACATTCATTTATCCTTCAAATTACTATGTGGCTTCAAAGGTATTATTTTATATTCTTACTGTGAATTTACATAATGTTTATTATTTTACCCTTCAAAAAAAGTCTTCTAAACTAAATTTTTTTTTTTTTTTTAACTTTTCTTTCACGTCAATGATGACATCTGTTTTGGGAGCTCAGGGGCCAGCCGAAGGTAAGAGATTTGGTTTGTTATGTGATGCTTGTAAAGA ................................................................(((((.....((((.......))))....)))))......................((((((.....(((..(((....)))..))).....))))))........................................................................................ ................................................................65..................................................................................................165................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553575(SRX182781) source: Kidney. (Kidney) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTCG......................................................................................... | 23 | 6.00 | 0.00 | 5.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTGGC...................................................................................... | 26 | 5.00 | 0.00 | - | - | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTAACTTTATAG..................................................................................... | 31 | 5.00 | 0.00 | 2.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTAGG....................................................................................... | 25 | 3.00 | 0.00 | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTCTCT.............................................................................................. | 22 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTCAAG........................................................................................... | 25 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................CTCAGGGGCCAGCCGAAG..................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TAAATTTTTTTTTTTTTTTTATG............................................................................................ | 23 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTAACG............................................................................................ | 24 | 2.00 | 0.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................TTTTTTAACTTTTCTTTCG.................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTCAAG............................................................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTAACT............................................................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................AAACTAAATTTTTTTTTTTTTTCC............................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTGGG....................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTCAG...................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACGCT......................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTACAG....................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTCTTG.............................................................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTAATA....................................................................................... | 25 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................AATTTTTTTTTTTTTTTTAACTTA......................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTGGC........................................................................................ | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................GTTTGTTATGTGATGCTTGTAAA.. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTATG....................................................................................... | 25 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTGGAG...................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTGGGC....................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTCTTT..................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTCG............................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTCACA.............................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................TTTATATTCTTACTGTGAAT................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTATTTT.......................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTAACT........................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AATTTTTTTTTTTTTTTTAACTTGAAG...................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .......................................................................................................................................TAAATTTTTTTTTTTTTTTTCTTA........................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTAAC....................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................TTTTTTAACTTTTCTTTTTTA................................................................................ | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTGGCA..................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................TAAATTTTTTTTTTTTTTTTACAAG.......................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................AATTTTTTTTTTTTTTTTAACTTTTATT..................................................................................... | 28 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTAAGG...................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTCGC...................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTCG....................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................AACTAAATTTTTTTTTTTTTTTTCAG............................................................................................ | 26 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................TTTTTTTTTTTTAACTTTTCTTTCACG................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTCG................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACGCAG........................................................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTATAG...................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................AATTTTTTTTTTTTTTTTAACTTAAAG...................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................TTTTTTTTTTTTTTTAACTTTTCTTCCGG................................................................................. | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTAACG........................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................TTTTTTTTTTTTTTTAACTTTTCTTTTTAG................................................................................ | 30 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTAAACAG......................................................................................... | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CTAAATTTTTTTTTTTTTTTTAAAATG......................................................................................... | 27 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTCTTT....................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATGACATCTGTTTTGG.......................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| ...................................................................................................................................................TTTTTTTTAACTTTTCTTTC................................................................................... | 20 | 4 | 0.25 | 0.25 | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTT........................................................................................ | 24 | 9 | 0.11 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTTGCA..................................................................................... | 27 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTTTTCAG.................................................................................... | 28 | 9 | 0.11 | 0.11 | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGCCTGTCTTACTAGCTAATAGACATTCATTTATCCTTCAAATTACTATGTGGCTTCAAAGGTATTATTTTATATTCTTACTGTGAATTTACATAATGTTTATTATTTTACCCTTCAAAAAAAGTCTTCTAAACTAAATTTTTTTTTTTTTTTTAACTTTTCTTTCACGTCAATGATGACATCTGTTTTGGGAGCTCAGGGGCCAGCCGAAGGTAAGAGATTTGGTTTGTTATGTGATGCTTGTAAAGA ................................................................(((((.....((((.......))))....)))))......................((((((.....(((..(((....)))..))).....))))))........................................................................................ ................................................................65..................................................................................................165................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553575(SRX182781) source: Kidney. (Kidney) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................GAGCTCAGGGGCCAGCCGGGT..................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACTTGT........................................................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..........................................................................................................................................ATTTTTTTTTTTTTTTTAACAAAA........................................................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .........................ATTCATTTATCCTTCAAT............................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| .............................................................................................................TACCCTTCAAAAAAAGTTC.......................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................AAATTTTTTTTTTTTTTTTAACTTTT........................................................................................ | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |