| (1) B-CELL | (1) BRAIN | (6) BREAST | (9) CELL-LINE | (5) CERVIX | (1) FIBROBLAST | (1) HEART | (1) HELA | (1) OTHER | (1) RRP40.ip | (13) SKIN | (1) UTERUS |
| CGTGGAGGCCAAGTCCTGGACTGCCAGCTCCTCCTACGGCAAGGGAGAAGGTAAACGCTCTGTGCTTTGGATCTGAGTGCTGTCACCTGGCAAGGCCCGGAGTGGCCTTCCCTGAGGTCAGCCTGGGAGAGGAGGCTGCACGCACTGCGAAGTGTAAATTCTTGGTGATGCCCATCCAGGGACTGGCATCCTTCTGTGCCCACTCAGGCTGCACCCTGCAGGAAGGCGGGGTCGGGGGGCTTGAGGAGGG .................................................................................................................................(((((..(((((..........)))))..)))))...((((((..((....))..))))))............................................................ ..........................................................................................................................123.................................................................191......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR189782 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | TAX577744(Rovira) total RNA. (breast) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR040040(GSM532925) G612N. (cervix) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | TAX577580(Rovira) total RNA. (breast) | SRR037931(GSM510469) 293GFP. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | TAX577589(Rovira) total RNA. (breast) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | GSM532876(GSM532876) G547T. (cervix) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | GSM532880(GSM532880) G659T. (cervix) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR040007(GSM532892) G601T. (cervix) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | SRR191597(GSM715707) 75genomic small RNA (size selected RNA from t. (breast) | TAX577579(Rovira) total RNA. (breast) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR363674(GSM830251) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR330876(SRX091714) tissue: skin psoriatic involveddisease state:. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................TGCCCATCCAGGGACGCCA............................................................... | 19 | 39.00 | 0.00 | 23.00 | - | 4.00 | - | - | - | - | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................AGAGGAGGCTGCACGTT.......................................................................................................... | 17 | 3.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................AGAGGAGGCTGCACGTTGG........................................................................................................ | 19 | 2.00 | 0.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............CCTGGACTGCCAGCTCCTCCTACGGCA................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................AGAGGAGGCTGCACGTTTG........................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................AGAGGAGGCTGCACGTAT......................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................GGCGGGGTCGGGGGGAGGG....... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................TCAGGCTGCACCCTGCCTAG........................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................TCAGGCTGCACCCTGCATAG........................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................ACGGCAAGGGAGAAGGGCCC................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ............................................................................................................................................................................................................................GGAAGGCGGGGTCGGCGCT........... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................TCGGGGGGCTTGAGGCC.. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................CTGCAGGAAGGCGGGGTCG................ | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........AGTCCTGGACTGCCAGCTCCTCCCACG.................................................................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................AGAGGAGGCTGCACGTCTG........................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGCCCATCCAGGGACGCGA............................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................AGAGGAGGCTGCACGTTTT........................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................AAGGCGGGGTCGGGGGGGACA....... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................GTGCTGTCACCTGGCA.............................................................................................................................................................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ........................................................................................................................GCCTGGGAGAGGAGGCTGC............................................................................................................... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| ....................................................................................................................................................................................GACTGGCATCCTTCTG...................................................... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| CGTGGAGGCCAAGTCCTGGACTGCCAGCTCCTCCTACGGCAAGGGAGAAGGTAAACGCTCTGTGCTTTGGATCTGAGTGCTGTCACCTGGCAAGGCCCGGAGTGGCCTTCCCTGAGGTCAGCCTGGGAGAGGAGGCTGCACGCACTGCGAAGTGTAAATTCTTGGTGATGCCCATCCAGGGACTGGCATCCTTCTGTGCCCACTCAGGCTGCACCCTGCAGGAAGGCGGGGTCGGGGGGCTTGAGGAGGG .................................................................................................................................(((((..(((((..........)))))..)))))...((((((..((....))..))))))............................................................ ..........................................................................................................................123.................................................................191......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR189782 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | TAX577744(Rovira) total RNA. (breast) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR040040(GSM532925) G612N. (cervix) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | TAX577580(Rovira) total RNA. (breast) | SRR037931(GSM510469) 293GFP. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | TAX577589(Rovira) total RNA. (breast) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | GSM532876(GSM532876) G547T. (cervix) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | GSM532880(GSM532880) G659T. (cervix) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR040007(GSM532892) G601T. (cervix) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | SRR191597(GSM715707) 75genomic small RNA (size selected RNA from t. (breast) | TAX577579(Rovira) total RNA. (breast) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR363674(GSM830251) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR330876(SRX091714) tissue: skin psoriatic involveddisease state:. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................GCGGGGTCGGGGGGCGTC....... | 18 | 4.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .................................................................................................................................................................................................................................GCGGGGTCGGGGGGCTGTC...... | 19 | 3.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................GACTGCCAGCTCCTCTAG...................................................................................................................................................................................................................... | 18 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................GCGGGGTCGGGGGGCGTCC...... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................GACTGCCAGCTCCTCGAG...................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................GCGGGGTCGGGGGGCGT........ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................AAGTGTAAATTCTTGGTC................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................AAAGCACAGAGCGTTTAC...................................................................................................................................................................................... | 18 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GACTGCCAGCTCCTCTAGT..................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................GCCAGCTCCTCCTACCGAG................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......................................................................................................................AGCCTGGGAGAGGAGGTTA................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................CGGGCCTTGCCAGGT....................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |