ID: uc003wyq.2_intron_0_0_chr8_18067690_f.5p
GENE: (1)
chr8:18067640-18067889+


(9)
B-CELL
(1)
BRAIN
(22)
BREAST
(27)
CELL-LINE
(2)
CERVIX
(8)
HEART
(3)
HELA
(1)
KIDNEY
(3)
LIVER
(1)
OTHER
(29)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
TGGGAGGATTGCATTCAGTCTAGTTCCTGGTTGCCGGCTGAAATAACCTGGTAAGTGGAACTCTGTAAGGGGCTTTGAAATTGGGGTTTAATCCTATCTCAACTGTGAGTACAGGAGAGTAGGTTCTACACGATGTCTACATTTCAAGTATAAGGTTGCTCAGAAAGTGTGGCTGGCACATACTTGGAAGCTAATGCTGTCACTACTCCACAGCTTAGTGGTGACAGTTACAGGTCCTTGATTCAAACTG
......................................................(((((((.(((....(((((((......)))))))..((((..((((....))))...))))...)))))))))).........................................................................................................................
..................................................51.............................................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
................................GCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................19116.0016.003.00--1.00----------------------------1.001.00-------1.00-------1.00-----------1.00-----1.00---------1.00----1.00---1.00--1.001.00--1.00----------------
............................................................................................................GTACAGGAGAGTAGGTTCTACACGATA...................................................................................................................278.000.00--8.00-----------------------------------------------------------------------------------------------------------
..................................................GTAAGTGGAACTCTG.........................................................................................................................................................................................1566.836.83-4.17---------0.33-------0.17-----------0.50----0.330.33------------------------------------------------------------------0.17-0.330.170.170.17
....................................................AAGTGGAACTCTGTAAGGGG..................................................................................................................................................................................2016.006.00-------4.00------------------1.00----------------------------------------------------1.00------------------------------
.................................................GGTAAGTGGAACTCTG.........................................................................................................................................................................................1625.005.00-2.50---------0.50-------0.50-----------0.50---0.50--------------------------------------------------------------------0.50-----
.....................................CTGAAATAACCTGGTAAGTGGA...............................................................................................................................................................................................2214.004.00-------1.00---------2.00-------------------------------------------------------------------1.00------------------------
................................................TGGTAAGTGGAACTCTG.........................................................................................................................................................................................1714.004.00-2.00---------1.00--------------------------------------------------------------------1.00-----------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAA..............................................................................................................................................................................................2614.004.00------1.00-----------------------1.00-------------------1.00-----------------1.00-----------------------------------------
......................................................GTGGAACTCTGTAAGGGGC.................................................................................................................................................................................1913.003.00--------------------1.001.00------------------------------------------------------------------------------1.00---------
................AGTCTAGTTCCTGGTTGCCGGCTG..................................................................................................................................................................................................................2413.003.00-----3.00--------------------------------------------------------------------------------------------------------
.................................CCGGCTGAAATAACCTGGTAAGTGGA...............................................................................................................................................................................................2613.003.00----1.00-------2.00-------------------------------------------------------------------------------------------------
...................CTAGTTCCTGGTTGCCGGCTGA.................................................................................................................................................................................................................2213.003.00----3.00---------------------------------------------------------------------------------------------------------
..............................................................................................................ACAGGAGAGTAGGTTCTA..........................................................................................................................1813.003.00---------2.00--------------------------------------------1.00-------------------------------------------------------
................AGTCTAGTTCCTGGTTGC........................................................................................................................................................................................................................1813.003.00-----------------------------2.00--------1.00-----------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAACT............................................................................................................................................................................................2813.003.00-----------------------------------1.00---1.00-----------------------------------------------------------1.00----------
.................................CCGGCTGAAATAACCTGG.......................................................................................................................................................................................................1813.003.001.00------------------1.00-----------------------------------1.00------------------------------------------------------
.............................GTTGCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................2212.002.00----------------1.00----------------------------------------------1.00----------------------------------------------
..............................................................................................................ACAGGAGAGTAGGTTCTACA........................................................................................................................2012.002.00----------------------1.00---------------------------------------------------------------------------1.00-----------
...............................TGCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................2012.002.00--------2.00-----------------------------------------------------------------------------------------------------
................AGTCTAGTTCCTGGTTGCCGGCTGAAATA.............................................................................................................................................................................................................2912.002.00--------------------------------------------------------------1.00-------1.00---------------------------------------
................................GCCGGCTGAAATAACCTG........................................................................................................................................................................................................1812.002.00---1.00-------1.00--------------------------------------------------------------------------------------------------
.............................GTTGCCGGCTGAAATAACCTG........................................................................................................................................................................................................2112.002.001.00-----------------------------------------------------------------------1.00-------------------------------------
............................GGTTGCCGGCTGAAATAA............................................................................................................................................................................................................1812.002.00--------------1.00--------------------------------------------------------1.00--------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGA...............................................................................................................................................................................................2512.002.00------1.00------------------------------------------------------------------------------------1.00------------------
..................................CGGCTGAAATAACCTGG.......................................................................................................................................................................................................1712.002.001.00------------1.00------------------------------------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGT......................................................................................................................................................................................................1812.002.00-----2.00--------------------------------------------------------------------------------------------------------
..............................TTGCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................2112.002.00---1.00------------------------------------------------1.00---------------------------------------------------------
....................TAGTTCCTGGTTGCCGGCTGAA................................................................................................................................................................................................................2212.002.00---------1.00------------------------1.00---------------------------------------------------------------------------
....................................GCTGAAATAACCTGGTAAGT..................................................................................................................................................................................................2012.002.00-------------------1.00-------------------------------------------------------1.00----------------------------------
.......................................................TGGAACTCTGTAAGGGG..................................................................................................................................................................................1712.002.00--------2.00-----------------------------------------------------------------------------------------------------
.............................................ACCTGGTAAGTGGAACTCTG.........................................................................................................................................................................................2012.002.00----------------------------------------------------------1.00-----------------------------------1.00---------------
......................................................GTGGAACTCTGTAAGGGGCTTT..............................................................................................................................................................................2212.002.00-------------1.00--------1.00---------------------------------------------------------------------------------------
..........................CTGGTTGCCGGCTGAAATAA............................................................................................................................................................................................................2012.002.00------------------1.00--------1.00----------------------------------------------------------------------------------
....................................................AAGTGGAACTCTGTAAGGGGC.................................................................................................................................................................................2112.002.00---1.00--------------------------1.00-------------------------------------------------------------------------------
...........................TGGTTGCCGGCTGAAATAA............................................................................................................................................................................................................1912.002.00-----------------------2.00--------------------------------------------------------------------------------------
..........................CTGGTTGCCGGCTGAAAT..............................................................................................................................................................................................................1812.002.00----------------------------2.00---------------------------------------------------------------------------------
..........................................ATAACCTGGTAAGTGGAACTCTGTA.......................................................................................................................................................................................2512.002.00----------2.00---------------------------------------------------------------------------------------------------
...............................................CTGGTAAGTGGAACTCTGTAAGGGGC.................................................................................................................................................................................2611.001.00-------------1.00------------------------------------------------------------------------------------------------
.....................................CTGAAATAACCTGGTAAGTGGAAC.............................................................................................................................................................................................2411.001.00----------------1.00---------------------------------------------------------------------------------------------
.................GTCTAGTTCCTGGTTGCCGG.....................................................................................................................................................................................................................2011.001.00--------------------------------------------1.00-----------------------------------------------------------------
...................................................TAAGTGGAACTCTGTA.......................................................................................................................................................................................1611.001.00-------------------------------1.00------------------------------------------------------------------------------
.................GTCTAGTTCCTGGTTGCCGGCT...................................................................................................................................................................................................................2211.001.00-----------1.00--------------------------------------------------------------------------------------------------
.............................GTTGCCGGCTGAAATAACCT.........................................................................................................................................................................................................2011.001.00------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................GAGTACAGGAGAGTAGGTTCT...........................................................................................................................2111.001.00------1.00-------------------------------------------------------------------------------------------------------
...GAGGATTGCATTCAGTCTAG...................................................................................................................................................................................................................................2011.001.00------------------1.00-------------------------------------------------------------------------------------------
.................................................GGTAAGTGGAACTCTGTAAGGGGCTT...............................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------1.00------------
........TTGCATTCAGTCTAGTTC................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------1.00-------------
..............................TTGCCGGCTGAAATA.............................................................................................................................................................................................................1511.001.00---------------------------------------------1.00----------------------------------------------------------------
...................................................TAAGTGGAACTCTGTAAGGG...................................................................................................................................................................................2011.001.00------------------------1.00-------------------------------------------------------------------------------------
.......................................................TGGAACTCTGTAAGGGGC.................................................................................................................................................................................1811.001.00-----------------1.00--------------------------------------------------------------------------------------------
..............TCAGTCTAGTTCCTGGTTGCC.......................................................................................................................................................................................................................2111.001.00----------------------------------------1.00---------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAACTCT..........................................................................................................................................................................................3011.001.001.00-------------------------------------------------------------------------------------------------------------
...............CAGTCTAGTTCCTGGTTGCC.......................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------1.00--------
........................................AAATAACCTGGTAAGTGGAACT............................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------------1.00--------------
..............................................CCTGGTAAGTGGAACTC...........................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------------------1.00--------------------------
...................CTAGTTCCTGGTTGCCGGCT...................................................................................................................................................................................................................2011.001.00----------1.00---------------------------------------------------------------------------------------------------
.............................................ACCTGGTAAGTGGAACTCTGT........................................................................................................................................................................................2111.001.00-------------------------------------------------------------------------1.00------------------------------------
.....................................................AGTGGAACTCTGTAAGGGGCT................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------1.00----------------------------
..........GCATTCAGTCTAGTTCCTG.............................................................................................................................................................................................................................1911.001.001.00-------------------------------------------------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAAC.............................................................................................................................................................................................2711.001.00------------------1.00-------------------------------------------------------------------------------------------
..................................................GTAAGTGGAACTCTGTA.......................................................................................................................................................................................1711.001.00----------1.00---------------------------------------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAAA.............................................................................................................................................................................................2711.004.00----1.00---------------------------------------------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAACTCTG.........................................................................................................................................................................................3111.001.00----------------1.00---------------------------------------------------------------------------------------------
......................................................GTGGAACTCTGTAAGGGG..................................................................................................................................................................................1811.001.001.00-------------------------------------------------------------------------------------------------------------
...............................................CTGGTAAGTGGAACTCTGAA.......................................................................................................................................................................................2011.001.00---------------------------------------------------------------------1.00----------------------------------------
...................CTAGTTCCTGGTTGCCGG.....................................................................................................................................................................................................................1811.001.00-------------------------------------1.00------------------------------------------------------------------------
.................GTCTAGTTCCTGGTTGCCG......................................................................................................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------
...............................................CTGGTAAGTGGAACTCTGTAAGGGGCT................................................................................................................................................................................2711.001.00--------------1.00-----------------------------------------------------------------------------------------------
....................................GCTGAAATAACCTGGTAAGTGGA...............................................................................................................................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------------------
.............................................ACCTGGTAAGTGGAACT............................................................................................................................................................................................1711.001.00--------------------1.00-----------------------------------------------------------------------------------------
..................................CGGCTGAAATAACCTGGTAAGTGGAACA............................................................................................................................................................................................2811.001.00---------------------1.00----------------------------------------------------------------------------------------
...............................................................TGTAAGGGGCTTTGAAATTGGGGTTTAATC.............................................................................................................................................................3011.001.00-----------------------------------------------------------1.00--------------------------------------------------
.....................................CTGAAATAACCTGGTAAG...................................................................................................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------------------------------------
...........................................................ACTCTGTAAGGGGCTTTG.............................................................................................................................................................................1811.001.00--------------------------------------------------------------------------1.00-----------------------------------
.............TTCAGTCTAGTTCCTGGTTGCC.......................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------1.00-------------------------------------------
.................GTCTAGTTCCTGGTTGCCGGC....................................................................................................................................................................................................................2111.001.001.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................TGAGTACAGGAGAGTAGG...............................................................................................................................1811.001.00------------------------------------------------1.00-------------------------------------------------------------
.....................................................AGTGGAACTCTGTAAGGGGCTTT..............................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------1.00-----------------
..................................................GTAAGTGGAACTCTGTAAGGGGCTTTGAAATTGG......................................................................................................................................................................3411.001.00----------------------------------------------------------------------------1.00---------------------------------
....AGGATTGCATTCAGTCTAG...................................................................................................................................................................................................................................1911.001.00---------------------------------1.00----------------------------------------------------------------------------
.....................................CTGAAATAACCTGGTAAGTG.................................................................................................................................................................................................2011.001.00------------------------1.00-------------------------------------------------------------------------------------
..................................................GTAAGTGGAACTCTGTAAGGG...................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------1.00----------------------
...........................................................ACTCTGTAAGGGGCTTTGA............................................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00--------------------------------------------
..................................................GTAAGTGGAACTCTGTAAGGGGC.................................................................................................................................................................................2311.001.00--------------------------1.00-----------------------------------------------------------------------------------
..........................CTGGTTGCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------1.00---------------------
................................GCCGGCTGAAATAACCT.........................................................................................................................................................................................................1711.001.00---------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................GAGTACAGGAGAGTAGGTTCTACA........................................................................................................................2411.001.00------1.00-------------------------------------------------------------------------------------------------------
.............................................ACCTGGTAAGTGGAACTC...........................................................................................................................................................................................1811.001.00------------1.00-------------------------------------------------------------------------------------------------
.....................................CTGAAATAACCTGGTAAGTGG................................................................................................................................................................................................2111.001.00------------------------------------------1.00-------------------------------------------------------------------
........................TCCTGGTTGCCGGCTGAAAT..............................................................................................................................................................................................................2011.001.00-------------------------1.00------------------------------------------------------------------------------------
.......................TTCCTGGTTGCCGGCTGAAAT..............................................................................................................................................................................................................2111.001.00---------------------------1.00----------------------------------------------------------------------------------
..................................................GTAAGTGGAACTCTGTAAGG....................................................................................................................................................................................2011.001.00---------------1.00----------------------------------------------------------------------------------------------
.........................CCTGGTTGCCGGCTGAAATAACCTGG.......................................................................................................................................................................................................2611.001.00---------------1.00----------------------------------------------------------------------------------------------
........................................AAATAACCTGGTAAGTGGAA..............................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------1.00-------------------------
..............................TTGCCGGCTGAAATAACC..........................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00--------------------------------------------------------
............................................AACCTGGTAAGTGGAACT............................................................................................................................................................................................1811.001.00-------------------------------------------1.00------------------------------------------------------------------
................AGTCTAGTTCCTGGTTGCCGGCT...................................................................................................................................................................................................................2311.001.00--------------------------------------------------------1.00-----------------------------------------------------
................................................TGGTAAGTGGAACTCTGTAAGGGGCT................................................................................................................................................................................2611.001.00---------1.00----------------------------------------------------------------------------------------------------
...............................................CTGGTAAGTGGAACTCTG.........................................................................................................................................................................................1811.001.00--------------------------------1.00-----------------------------------------------------------------------------
............................................AACCTGGTAAGTGGAACTCTGTAAGGG...................................................................................................................................................................................2711.001.00------------------------------------1.00-------------------------------------------------------------------------
..............................................CCTGGTAAGTGGAACTCTGTAAGG....................................................................................................................................................................................2411.001.00-----------------------------------------------1.00--------------------------------------------------------------
.............................................ACCTGGTAAGTGGAACTCTGTAAGGGGC.................................................................................................................................................................................2811.001.00--------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................ACAGCTTAGTGGTGACAGTTACAGGTCC.............2811.001.00------------------------------------------------------------------------------1.00-------------------------------
........................................................GGAACTCTGTAAGGGGCTTTGAAATTG.......................................................................................................................................................................2711.001.00------1.00-------------------------------------------------------------------------------------------------------
..........................................ATAACCTGGTAAGTGGAA..............................................................................................................................................................................................1820.500.50---------------------------------------------------------------------------------------------------------0.50----
..............................................................CTGTAAGGGGCTTTG.............................................................................................................................................................................1560.170.17-------------------0.17------------------------------------------------------------------------------------------

Antisense strand
TGGGAGGATTGCATTCAGTCTAGTTCCTGGTTGCCGGCTGAAATAACCTGGTAAGTGGAACTCTGTAAGGGGCTTTGAAATTGGGGTTTAATCCTATCTCAACTGTGAGTACAGGAGAGTAGGTTCTACACGATGTCTACATTTCAAGTATAAGGTTGCTCAGAAAGTGTGGCTGGCACATACTTGGAAGCTAATGCTGTCACTACTCCACAGCTTAGTGGTGACAGTTACAGGTCCTTGATTCAAACTG
......................................................(((((((.(((....(((((((......)))))))..((((..((((....))))...))))...)))))))))).........................................................................................................................
..................................................51.............................................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
.......................................................................................................................................................................................................TCACTACTCCACAGCTAAC................................ 191.000.00---------------------------------------------------1.00----------------------------------------------------------
.........TGCATTCAGTCTAGTTCCTGC............................................................................................................................................................................................................................ 211.000.00-------------------------1.00------------------------------------------------------------------------------------
.............TTCAGTCTAGTTCCTGGCAGA........................................................................................................................................................................................................................ 211.000.00----------------------------------------------------------------1.00---------------------------------------------
......................CAGCCGGCAACCAGGAAC.................................................................................................................................................................................................................. 1811.001.00----------------------------------------------1.00---------------------------------------------------------------
................................................................................................................................................................................................................................ATCAAGGACCTGTAACTG........ 1821.001.001.00-------------------------------------------------------------------------------------------------------------
.......ATTGCATTCAGTCTATA.................................................................................................................................................................................................................................. 171.000.00------------------------------------------------------------------------------------------------------1.00-------
.....................................................................................................................................................................................................TGTCACTACTCCACAC..................................... 161.000.00-------------------------------------------------------------------------------------------------------1.00------
...........................................................................................................................................................................................................................AGGACCTGTAACTGTCACC............ 1911.001.001.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AGTTTGAATCAAGGACCTGT. 2011.001.00----1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGTAACTGTCACCACTAA.................. 1820.500.50----------------------------------0.50---------------------------------------------------------------------------