ID: uc003wvs.3_intron_7_0_chr8_12293467_r
GENE: (1)
chr8:12293417-12293806-


(2)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(2)
BRAIN
(5)
BREAST
(35)
CELL-LINE
(4)
CERVIX
(2)
HEART
(5)
HELA
(3)
LIVER
(3)
OTHER
(1)
RRP40.ip
(35)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TTGAGCGCCGCTTCCTGGCGGTGCGCACACTGCGCTCCTTCCCCTGGCAGGTGGGCGGCGGGGCGAGCGGAGAGGCCCGCGGGGGTCGCGGGAGTCCAGGGGCAGACGGGATGGGTCTCCGTGCTGAAACCCCCGGCGCTCCGGCCACGTGAGTTCCTGGGCTCTCCTCGGTCAGGGCCGCGAGACCCGGTCCCCGTCCCTGGGGCCTGGCCAGAGTCGCTCGCACCCCTTCTGCCCCGCGAGCTGGCGGCGGAAGCTGGGGGCGTCTCCACCGCCTTAGGGGGTAGACGCGCGCTCGGTGTGGGGTACGGTTCACGATCATTTTCACGACTTTTTAAAGGCAGTAATCGTTCTGGTCACTGGGACACAGCTGCACTCGCCCATTCTAAA
..................................................((((.(((...((((..(((.((..((((((.....))))))..))..(((.(((((((((....)).)))).)))...)))))).))))))).))))..................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR343334SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029126(GSM416755)
143B. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.................................................GGTGGGCGGCGGGGCGGGGC.................................................................................................................................................................................................................................................................................................................................2034.000.00--6.003.003.002.00---2.00-2.001.001.002.00-2.00--1.00---1.00-------1.00---1.00----1.00------1.00-----1.00-1.00-1.00-1.00-------------------------------------------------
..................................................GTGGGCGGCGGGGCGGGGC.................................................................................................................................................................................................................................................................................................................................1912.000.00---1.001.001.003.00-----1.00------------------------1.00---1.00--1.00-1.00--1.00-----------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCAT......................................................................................................................2256.000.60-----------------2.00--2.00-------1.00-----------------------1.00--------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCTT......................................................................................................................223.000.00----------------------2.00---------1.00----------------------------------------------------------------------------
............................................................................................AGTCCAGGGGCAGACGGGATGGGTCTCCGCGC..........................................................................................................................................................................................................................................................................322.000.00---------------------2.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCTTT......................................................................................................................222.000.00-------------1.00------------------------------------------1.00----------------------------------------------------
.................................................................................................................................CCCCCGGCGCTCCGGGCC...................................................................................................................................................................................................................................................182.000.00---1.00--------------------------------1.00------------------------------------------------------------------------
...................................................TGGGCGGCGGGGCGAGG..................................................................................................................................................................................................................................................................................................................................172.000.00-------2.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCACT.....................................................................................................................2351.000.20-----------------------------1.00-------------------------------------------------------------------------------
.............................................GGCAGGTGGGCGGCGGGT.......................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCACGA....................................................................................................................2451.000.20------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................GGGGCCTGGCCAGAGTTGAT.........................................................................................................................................................................201.000.00---------------------------------------1.00---------------------------------------------------------------------
...............................................................................................................................................................................GGCCGCGAGACCCGGAG......................................................................................................................................................................................................171.000.00---------------1.00---------------------------------------------------------------------------------------------
..............................................................................GCGGGGGTCGCGGGATTGC.....................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------1.00------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................CGGTTCACGATCATTG..................................................................161.000.00----------------------------------------------------------1.00--------------------------------------------------
.................................................GGTGGGCGGCGGGGCGGGGG.................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCTTTT.....................................................................................................................231.000.00---------------------------------------------------1.00---------------------------------------------------------
..........................................................................................GGAGTCCAGGGGCAGACGGGATGGGTCCCCG.............................................................................................................................................................................................................................................................................311.000.00--------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTTCCA........................................................................................................................201.000.00-------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................GAGTCGCTCGCACCCCTTCCCGT..........................................................................................................................................................231.000.00------------------1.00------------------------------------------------------------------------------------------
.................................................GGTGGGCGGCGGGGCGT....................................................................................................................................................................................................................................................................................................................................171.000.00---------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................CCCCCGGCGCTCCGGGC....................................................................................................................................................................................................................................................171.000.00-------------------1.00-----------------------------------------------------------------------------------------
....................................................GGGCGGCGGGGCGAGCC.................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------1.00-----------------------------------------------------------------
..................................................GTGGGCGGCGGGGCGGA...................................................................................................................................................................................................................................................................................................................................171.000.00-------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................GTCACTGGGACACAGCTG.................1881.001.00--------0.88--------------------------------------------------------------------------------------0.12-------------
.......................................................................................................................................................................................................................................................................................................................................CGACTTTTTAAAGGCAGTAATCGTTCTT...................................281.000.00--------------------------------------------------1.00----------------------------------------------------------
.............................................................................CGCGGGGGTCGCGGGATCG......................................................................................................................................................................................................................................................................................................191.000.00----------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................TTCCTGGGCTCTCCTCTG...........................................................................................................................................................................................................................181.000.00----------------------------------1.00--------------------------------------------------------------------------
............................................................................CCGCGGGGGTCGCGGGAC........................................................................................................................................................................................................................................................................................................181.000.00------------------------------1.00------------------------------------------------------------------------------
..................................................GTGGGCGGCGGGGCGAGCGTA...............................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCTTC......................................................................................................................221.000.00---------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGCAGTAATCGTTCTGG..................................1890.670.67--------0.67----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCA.......................................................................................................................2150.600.60----------------------------0.20-----------------------------------------------------------0.200.20-------------------
..............................................................................................................................................................................................................................................................................ACCGCCTTAGGGGGTAG.......................................................................................................1720.500.50------------------------------------------------------------------0.50------------------------------------------
..............................................................................................................................................................................................................................................................AGCTGGGGGCGTCTCCACCGCCTT................................................................................................................2420.500.50----------------------------------------------------------------------0.50--------------------------------------
................................................................................................................................................................GCTCTCCTCGGTCAGGGCCGC.................................................................................................................................................................................................................2120.500.50-------------------------------------------------------------------0.50-----------------------------------------
..............................................................................................................................................................................................................................................................................................GACGCGCGCTCGGTGTGGG.....................................................................................1950.400.40---------------------------------0.40---------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCT..........................................................................................................................1850.400.40-----------------------------0.20------------------------------------------------------------0.20------------------
..............................................................................................................................................................................................................................................................................................................................................................................ACAGCTGCACTCGCCCATT.....1930.330.33------------------------------------------------------------------------------0.33------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................CACTGGGACACAGCTGCACTC............2130.330.33-----------------------------------------------------------------------------0.33-------------------------------
............................................................................................................................................................................................................................................................................................................................GATCATTTTCACGACTTTTTAAAGG.................................................2570.290.29-----------------------0.29-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................GTCACTGGGACACAGCTGC................1980.250.25-----------------------------------------------------------------------------------0.25-------------------------
.......................................................................................................................................................................................................................GTCGCTCGCACCCCTTCTGCC..........................................................................................................................................................2140.250.25-------------------------------------------------------------------------0.25-----------------------------------
........................................................................................................................................................................CGGTCAGGGCCGCGAGACCCGG........................................................................................................................................................................................................2240.250.25------------------------------------------------------------------------------------0.25------------------------
................................................................................................CAGGGGCAGACGGGATGGGTCTCC..............................................................................................................................................................................................................................................................................2490.220.22------------------------0.11----------------------------------------0.11-------------------------------------------
...........................................CTGGCAGGTGGGCGGCGGGGCGAGCGGAGA.............................................................................................................................................................................................................................................................................................................................3090.220.22-----------------------0.11-----------------------------------------------0.11-------------------------------------
................................................AGGTGGGCGGCGGGGCGAGCGGAGAGG...........................................................................................................................................................................................................................................................................................................................2790.220.22-----------------------------------------------------------------0.22-------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................AGTAATCGTTCTGGTCACTGGGAC........................2490.220.22-------------------------------------------------------------------------------------0.22-----------------------
...............................................................................................CCAGGGGCAGACGGGATGGGTCTCC..............................................................................................................................................................................................................................................................................2590.220.22------------------------------0.11--------------------------------------------------------------------0.11---------
..............................................................................................TCCAGGGGCAGACGGGATGGGTCTCC..............................................................................................................................................................................................................................................................................2690.220.22-----------------------------------------------------------------------0.11-----------------------------------0.11-
................................................................................................................................................................................GCCGCGAGACCCGGTCCC....................................................................................................................................................................................................1850.200.20------------------------------------------------------------------------0.20------------------------------------
....................................................................................................................................................................................................................................................TGGCGGCGGAAGCTGGGGGCGTCTCC........................................................................................................................2650.200.20-------------------------------------------------------------------------------0.20-----------------------------
.....................................................................................................................TCCGTGCTGAAACCCCCGGCG............................................................................................................................................................................................................................................................2150.200.20-------------------------------------------------------------------------------------------0.20-----------------
..........................................................................................................................................................................................................................................................CGGAAGCTGGGGGCGTCTCCAC......................................................................................................................2250.200.20--------------------------------------------------------------------------------0.20----------------------------
...........................................................................................................................................................................................................................................CCCGCGAGCTGGCGGCGGAAGC.....................................................................................................................................2260.170.17---------------------------------0.17---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................GCTGGCGGCGGAAGCTG...................................................................................................................................1760.170.17---------------------------------------------------------------------------------0.17---------------------------
......................................................................................................................................................................................AGACCCGGTCCCCGTCCCTGGGG.........................................................................................................................................................................................2360.170.17-------------------------------------------------------------------------0.17-----------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TCGTTCTGGTCACTGGGACACAGC...................2470.140.14------------------------------------------------------------------0.14------------------------------------------
.........................................................................................................................................................................................................................................GCCCCGCGAGCTGGCGGCGGAAG......................................................................................................................................2370.140.14---------------------------------------------------------------------------------------------0.14---------------
................................................................................................................................................................................................................................................................................................................................ATTTTCACGACTTTTTAAAGGCAGTAA...........................................2770.140.14----------------------------------------------------------------------------------0.14--------------------------
.................................................................................................................................................................................................................................................................................................................................................................TGGTCACTGGGACACAGC...................1880.120.12--------0.12----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................GGCAGTAATCGTTCTGGTCACTGGGA.........................2680.120.12-------------------------------------------------------------------------------------------------0.12-----------
...............................................................................................................................................................................................................................................................................................................................................................TCTGGTCACTGGGACACAGCTG.................2280.120.12---------------------------0.12---------------------------------------------------------------------------------
...............................................................................................CCAGGGGCAGACGGGATGGGTCTCCGTGC..........................................................................................................................................................................................................................................................................2980.120.12-----------------------------------------------------------------------0.12-------------------------------------
.....................................................................................................GCAGACGGGATGGGTCTCCG.............................................................................................................................................................................................................................................................................2080.120.12-------------------------------------------------------------------------------0.12-----------------------------
.................................................................................................................................................................................................................................................................................................................................................AAGGCAGTAATCGTTCTGGTCACTGGGAC........................2980.120.12--------------------------0.12----------------------------------------------------------------------------------
..........................................CCTGGCAGGTGGGCGGCGGGGCGAGCGGAGA.............................................................................................................................................................................................................................................................................................................................3190.110.11-----------------------------------------------------------------------0.11-------------------------------------
......................................TTCCCCTGGCAGGTGGGC..............................................................................................................................................................................................................................................................................................................................................1890.110.11--------------------------------------------------------------------------------------------------------0.11----
..........................................................................................................................................................................................................................................................................................................................................................ATCGTTCTGGTCACTGGGA.........................1990.110.11------0.11------------------------------------------------------------------------------------------------------
.........................................CCCTGGCAGGTGGGCGGCG..........................................................................................................................................................................................................................................................................................................................................1990.110.11-------------------------------0.11-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGCAGTAATCGTTCTGGT.................................1990.110.11----------------------------------------------------------------------------------------------------------0.11--
....................................CCTTCCCCTGGCAGGTGGGCG.............................................................................................................................................................................................................................................................................................................................................2190.110.11---------------------------------------------------------------------------------------------------------0.11---
......................................................................................................................................................................................................CCTGGGGCCTGGCCAGAGTCGCTCGCAC....................................................................................................................................................................2890.110.11---------------------------------------------------------------0.11---------------------------------------------
...............................................CAGGTGGGCGGCGGGGCGAGCGG................................................................................................................................................................................................................................................................................................................................2390.110.11------------------------------------------------------------------------0.11------------------------------------
.............................................GGCAGGTGGGCGGCGGGGCGAG...................................................................................................................................................................................................................................................................................................................................2290.110.11-------------------------------------------------------------------------------------------------------0.11-----
............................ACTGCGCTCCTTCCCCTGGC......................................................................................................................................................................................................................................................................................................................................................2090.110.11--------------------------------0.11----------------------------------------------------------------------------
................................................AGGTGGGCGGCGGGGCGAG...................................................................................................................................................................................................................................................................................................................................1990.110.11--------------------------------------------------------------------------0.11----------------------------------
..........................................................CGGGGCGAGCGGAGAGGCCCGCGG....................................................................................................................................................................................................................................................................................................................2490.110.11----------------------------------------------------------------------------------------------------0.11--------
.....................................................................................................GCAGACGGGATGGGTCTCC..............................................................................................................................................................................................................................................................................1990.110.11------0.11------------------------------------------------------------------------------------------------------
..........................................CCTGGCAGGTGGGCGGCGGGGCGAGCGGAGAGGC..........................................................................................................................................................................................................................................................................................................................3490.110.11-----------------------------------------------------------------0.11-------------------------------------------

Antisense strand
TTGAGCGCCGCTTCCTGGCGGTGCGCACACTGCGCTCCTTCCCCTGGCAGGTGGGCGGCGGGGCGAGCGGAGAGGCCCGCGGGGGTCGCGGGAGTCCAGGGGCAGACGGGATGGGTCTCCGTGCTGAAACCCCCGGCGCTCCGGCCACGTGAGTTCCTGGGCTCTCCTCGGTCAGGGCCGCGAGACCCGGTCCCCGTCCCTGGGGCCTGGCCAGAGTCGCTCGCACCCCTTCTGCCCCGCGAGCTGGCGGCGGAAGCTGGGGGCGTCTCCACCGCCTTAGGGGGTAGACGCGCGCTCGGTGTGGGGTACGGTTCACGATCATTTTCACGACTTTTTAAAGGCAGTAATCGTTCTGGTCACTGGGACACAGCTGCACTCGCCCATTCTAAA
..................................................((((.(((...((((..(((.((..((((((.....))))))..))..(((.(((((((((....)).)))).)))...)))))).))))))).))))..................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR343334SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029126(GSM416755)
143B. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...........................................................................CCCGCGGGGGTCGCGGGG......................................................................................................................................................................................................................................................................................................... 1828.000.0017.0011.00-----------------------------------------------------------------------------------------------------------
...........................................................................CCCGCGGGGGTCGCGGGGA........................................................................................................................................................................................................................................................................................................ 198.000.006.002.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................AGGAGAGCCCAGGAACTC.............................................................................................................................................................................................................................. 1821.501.50-------------------------1.50-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................TTTTTAAAGGCAGTAATTAAG...................................... 211.000.00----------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................GCTGAAACCCCCGGCGGCG......................................................................................................................................................................................................................................................... 191.000.00--------1.00----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GCCTGGCCAGAGTCGCTCGA...................................................................................................................................................................... 201.000.00------------------------------------------------------------1.00------------------------------------------------
..................................................................................................................GTCTCCGTGCTGAAAAG................................................................................................................................................................................................................................................................... 171.000.00------------------1.00------------------------------------------------------------------------------------------
.................................................GGTGGGCGGCGGGGCGGGC.................................................................................................................................................................................................................................................................................................................................. 191.000.00-1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TCACGATCATTTTCACCTTT.......................................................... 201.000.00--------------------------------------------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTTCTGGTCACTGGGATCTG..................... 201.000.00------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAGCTCGCGGGGCAGAAGGGGTG................................................................................................................................................ 2340.750.75----------------------------------------------------------------0.75--------------------------------------------
..............................................................................................................................................................................................................................CGGGGCAGAAGGGGTGC....................................................................................................................................................... 1750.600.60------------------------0.20--------------------------------------------------------------0.20----0.20----------------
..........................................................................................................................................GAACTCACGTGGCCGGAG.......................................................................................................................................................................................................................................... 1820.500.50---------------------------------0.50---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................GAAAATGATCGTGAACCG................................................................ 1820.500.50---------------------------------------------------------------0.50---------------------------------------------
......................................................................................................................................................................................................................................................................CCCCTAAGGCGGTGGAGACGC........................................................................................................... 2120.500.50-----0.50-------------------------------------------------------------------------------------------------------
................................................................................................................................................................GCGGCCCTGACCGAGGAGAGC................................................................................................................................................................................................................. 2120.500.50---------------------------------------------------------------------0.50---------------------------------------
.......................................................................................................................................CCCAGGAACTCACGTGGCCGGAGCGC..................................................................................................................................................................................................................................... 2620.500.50--------------------------------------------------------------------0.50----------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................AATGGGCGAGTGCAGCTGTG..... 2030.330.33----------------------------------------------------------------------------0.33--------------------------------
..........................................................................................................................................................................................................................................................................CCCCTAAGGCGGTGGAG........................................................................................................... 1730.330.33---------------------------------------------------------------------------0.33---------------------------------
...........................................................................CCCGCGGGGGTCGCGGGC......................................................................................................................................................................................................................................................................................................... 180.250.00----------------------------------------------------------------------------------------------0.12---0.12----------
.................................................................................................................................................................................................................................CTCGCGGGGCAGAAGGGG................................................................................................................................................... 1840.250.25--------------------------------------------------------------------------0.25----------------------------------
...........................................................................CGCGACCCCCGCGGG............................................................................................................................................................................................................................................................................................................ 1580.250.25----------------------------------------------------------------------------------0.12-------------0.12------------
..............................................................................................................................................................................................................................TCGCGGGGCAGAAGGGGTGC.................................................................................................................................................... 2040.250.25------------------------0.25------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................CAGCTCGCGGGGCAGAAGGGGTGC................................................................................................................................................ 2440.250.25-----------------------------------------------------------------0.25-------------------------------------------
..............................................................................................................................................................................................................................GCGGGGCAGAAGGGGTGC...................................................................................................................................................... 1850.200.20-----------------------0.20-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................TACCCCACACCGAGCGC.................................................................................. 1750.200.20--------------------------0.20----------------------------------------------------------------------------------
..............................................................................................................................................................................GGGACCGGGTCTCGCGGCCC.................................................................................................................................................................................................... 2050.200.20--------------------------------------------------------------------------------------0.20----------------------
...............................................................................................................................................AGCCCAGGAACTCACGTGGC................................................................................................................................................................................................................................... 2060.170.17---------------------------------------------------------------0.17---------------------------------------------
...........................................................................CCGCGACCCCCGCGGG........................................................................................................................................................................................................................................................................................................... 1660.170.17-0.17-----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GCCTTTAAAAAGTCGTGAAAATG................................................ 2370.140.14---------------------------0.14---------------------------------------------------------------------------------
.................................................................................................................................GCCGGAGCGCCGGGGG..................................................................................................................................................................................................................................................... 1670.140.14-0.14-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................CCCAGTGACCAGAACGATTACT.......................... 2290.110.11--------------------------------------------------------------------------------0.11----------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCCAGTGACCAGAACGA.......................... 1790.110.11-----------------------------------------------------------------------------------------------------0.11-------
........................................................................................................................................................................................................................................................................................................................................................CCCAGTGACCAGAACGATTA.......................... 2090.110.11------------------------------------------------------------------------------------------------------0.11------
....................................................................................................................................................................................................................................................................................................................................................AGTGACCAGAACGATTACTGC............................. 2190.110.11---------------------------------------------------------------------------------0.11---------------------------
.......................................................................................................................................................................................................................................................................................................................GTGAAAATGATCGTGAA.............................................................. 1790.110.11------------------------------------------------------------------------0.11------------------------------------
...................................................................................................................................................................................................................................................................................................................................................AGTGACCAGAACGATTACTGCC............................. 2290.110.11------------------------------------------------------------------------------------------------------------0.11