uc003wof.2_intron_2_0_chr7_158813540

CAAATAACACCATGATGACCATTCTCATACACAAATCACTGTGCATAATTCTGAATATTTAACTGGAAAAATTCCTAGCAATGAAATTACTGGGTTGAATGGAATGAACATTCTAAGTTTATAATATATTTAGCTTATAGAGTAAATAAATATGGCATAATAATAAGCTATATTAGTTTTTTTTTTTTTTTTTTTGACAGAGTCTTCCTTTGTCAGCCAGGCTGGAGTGCAATGTGCAATGGCACAATCT ......................................................................................(((((((((((((((..((((((.......))))))....))))))))))....)))))......................................................................................................... ......................................................................................87....................................................................157...........................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR040034(GSM532919) G001N. (cervix)	SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart)	SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell)	SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTT..................................................	26		5.00	0.00	5.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGGC..................................................	26		3.00	0.00	2.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGGGG...................................................	26		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGGACT..................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................TCAGCCAGGCTGGAGTGCGGC.................	21		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGGT..................................................	26		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................GGGTTGAATGGAATGAACATT..........................................................................................................................................	21	1	2.00	2.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCTG..................................................	26		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................TTATAGAGTAAATAATAGG.................................................................................................	19		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGCC..................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................TTTTTTTTTTTTGACAGAGGCG.............................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTCTAG...................................................	27		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TATTAGTTTTTTTTTTTTTTTCATG.......................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTTCA..................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTCTG....................................................	27		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTCCCC.....................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCGG......................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTAGC....................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTACCA...................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................................................AGCCAGGCTGGAGTGCATA.................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTAAG....................................................	27		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGTTT...................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCAC..................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTGGAG............................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................TCAGCCAGGCTGGAGTGCAATGTCACG...........	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................................................GCCAGGCTGGAGTGCAAGTGC..............	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TTTTTTTTTTTTTTTTGACAGAGCGGG............................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCGAG.....................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTG..................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGAGT..................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTACC....................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTTTTTTTTTTTGACAGAGCGGG............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................GAGTAAATAAATATGAGC.............................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCTTG.....................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGCCTG..................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGAAAAG.................................................	28		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGTAGC..................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCA.......................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTCGC.....................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTA..................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................TGTCAGCCAGGCTGGAGTGCAATGTCACG...........	29		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGAAACC.................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TATTAGTTTTTTTTTTTTTTTTTTTATT....................................................	28		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTGAGG......................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTGACAGTTG...............................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTGAT....................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTCACC...................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCGG..................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTGGGG....................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTCGGG.....................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGACAGAG................................................	28	2	0.50	0.50	-	-	0.50	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGAC....................................................	25	4	0.50	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-

CAAATAACACCATGATGACCATTCTCATACACAAATCACTGTGCATAATTCTGAATATTTAACTGGAAAAATTCCTAGCAATGAAATTACTGGGTTGAATGGAATGAACATTCTAAGTTTATAATATATTTAGCTTATAGAGTAAATAAATATGGCATAATAATAAGCTATATTAGTTTTTTTTTTTTTTTTTTTGACAGAGTCTTCCTTTGTCAGCCAGGCTGGAGTGCAATGTGCAATGGCACAATCT
......................................................................................(((((((((((((((..((((((.......))))))....))))))))))....))))).........................................................................................................
......................................................................................87....................................................................157...........................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR040034(GSM532919)
G001N. (cervix)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTT..................................................

5.00

0.00

5.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGGC..................................................

3.00

0.00

2.00

1.00

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGGGG...................................................

3.00

0.00

3.00

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGGACT..................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................TCAGCCAGGCTGGAGTGCGGC.................

2.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGGT..................................................

2.00

0.00

1.00

...........................................................................................GGGTTGAATGGAATGAACATT..........................................................................................................................................

2.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCTG..................................................

2.00

0.00

1.00

......................................................................................................................................TTATAGAGTAAATAATAGG.................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGCC..................................................

1.00

0.00

1.00

.......................................................................................................................................................................................TTTTTTTTTTTTGACAGAGGCG.............................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTCTAG...................................................

1.00

0.00

1.00

..........................................................................................................................................................................TATTAGTTTTTTTTTTTTTTTCATG.......................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTTCA..................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTCTG....................................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTCCCC.....................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCGG......................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTAGC....................................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTACCA...................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................AGCCAGGCTGGAGTGCATA.................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTAAG....................................................

1.00

0.00

1.00

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGTTT...................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCAC..................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTGGAG............................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................TCAGCCAGGCTGGAGTGCAATGTCACG...........

1.00

0.00

1.00

.......................................................................................................................................................................................................................GCCAGGCTGGAGTGCAAGTGC..............

1.00

0.00

1.00

...................................................................................................................................................................................TTTTTTTTTTTTTTTTGACAGAGCGGG............................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCGAG.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTG..................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGAGT..................................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTACC....................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTTTTTTTTTTTGACAGAGCGGG............................................

1.00

0.00

1.00

...........................................................................................................................................GAGTAAATAAATATGAGC.............................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCTTG.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGCCTG..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGAAAAG.................................................

1.00

0.00

1.00

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGTAGC..................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTCA.......................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTCGC.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGGGTA..................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................TGTCAGCCAGGCTGGAGTGCAATGTCACG...........

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGAAACC.................................................

1.00

0.00

1.00

..........................................................................................................................................................................TATTAGTTTTTTTTTTTTTTTTTTTATT....................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTGAGG......................................................

1.00

0.00

1.00

...............................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTGACAGTTG...............................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTTGAT....................................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTTTCACC...................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGTCGG..................................................

1.00

0.00

1.00

...........................................................................................................................................................................ATTAGTTTTTTTTTTTTTTTTTTGGGG....................................................

1.00

0.00

1.00

............................................................................................................................................................................TTAGTTTTTTTTTTTTTTTTTCGGG.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTGACAGAG................................................

0.50

.............................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTGAC....................................................

0.50