ID: uc003wgn.3_intron_2_0_chr7_149568886_r.5p
GENE: (1)
chr7:149570113-149570362-


(1)
AGO2.ip
(4)
B-CELL
(7)
BRAIN
(6)
BREAST
(10)
CELL-LINE
(1)
FIBROBLAST
(5)
HEART
(2)
HELA
(1)
KIDNEY
(1)
LIVER
(3)
OTHER
(4)
SKIN
(1)
TESTES
(2)
UTERUS

Sense strand
AGGCAGAGGCTTTGGGATTAGATCCTTGACTCCTTGCGTCAGTAGTTAAGGTTTGTTTAAATATAAAATGGGATGGCCCTTCTTACAAGGTTGCTGGAGGATTAAATGAATAGGCATGTGGAAAGCACCTAGTATAATAAGGCTCGGTAGTTTCTTCCATCAGGGCTGGAAGAGACCACGGAGCCTGCTTTCCTCCTTCGGCGTTTGGATCTCACATATCCCTTCTTCTCTGGCGATCAAAAATCCCTAT
...........................................................................................................................................((((((.((.((((((((((.......)))))))))).)).))))))................................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189782SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
..........................................................................................................................................AAGGCTCGGTAGTTTCTTCC............................................................................................2017.007.006.00---------1.00----------------------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTGCTA............................................................225.000.005.00--------------------------------------------------
...............................................................................................................................................................TCAGGGCTGGAAGAGACCACGG.....................................................................2214.004.00----4.00----------------------------------------------
........................................................................................................................................ATAAGGCTCGGTAGTTTCTTCCA...........................................................................................2314.004.004.00--------------------------------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTGCTT............................................................2214.004.002.00-------------------------------------1.00-----------1.00
......................................................................................................................................................................TGGAAGAGACCACGGAGCCTGT..............................................................2213.001.003.00--------------------------------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTCCA...........................................................................................2112.002.00--------------1.00------------------1.00-----------------
.........................................................................................................................................TAAGGCTCGGTAGTTTCTTCT............................................................................................212.000.002.00--------------------------------------------------
.....................................................................................................................................................................................................................ACATATCCCTTCTTCCGC...................181.000.00-1.00-------------------------------------------------
......................................................................................................................................................................TGGAAGAGACCACGGAGCCTGA..............................................................2211.001.00------1.00--------------------------------------------
...........................................................................................................................................................TCCATCAGGGCTGGAAGAGACCACGG.....................................................................2611.001.00---------------------------------------1.00-----------
.....................................................................................................................................................................................................................ACATATCCCTTCTTCTTCTT.................201.000.00-1.00-------------------------------------------------
........................................................................................................................................ATAAGGCTCGGTAGTTTCTTCCAC..........................................................................................2411.004.00----------------------------------1.00----------------
.....................................................................................................TTAAATGAATAGGCATGTGGAAAGC............................................................................................................................2511.001.00-----1.00---------------------------------------------
.........................................................................................................................................TAAGGCTCGGTAGTTTCTTCC............................................................................................2111.001.00----------1.00----------------------------------------
.......................................................................................................................................AATAAGGCTCGGTAGTTTCTTC.............................................................................................2211.001.001.00--------------------------------------------------
.......................................................................................................................................AATAAGGCTCGGTAGTTTTTTC.............................................................................................221.000.00-------------------------------------1.00-------------
..........................................................................................................................................................................AGAGACCACGGAGCCTGCTTTCCTCC......................................................2611.001.00------------------------------------1.00--------------
......................................................................................................................................................................TGGAAGAGACCACGGAGCCTG...............................................................2111.001.00-----------------------------------------------1.00---
........................................................................................................................................................................GAAGAGACCACGGAGCCTGCTTTA..........................................................241.000.00--------1.00------------------------------------------
............................................................................................................................................................................AGACCACGGAGCCTGCTT............................................................1811.001.00---------1.00-----------------------------------------
.......................................................................................AGGTTGCTGGAGGATTAAATG..............................................................................................................................................2111.001.00---------1.00-----------------------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTCCATC.........................................................................................2311.001.00---------------1.00-----------------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTT.............................................................................................191.000.00----------------------1.00----------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTGTTAA...........................................................231.000.00-----------1.00---------------------------------------
........................................................................................................................................ATAAGGCTCGGTAGTTTCT...............................................................................................1911.001.00------------------------1.00--------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTC.............................................................................................1911.001.00---------------1.00-----------------------------------
......................................................................................................................................................................TGGAAGAGACCACGGAGCCTGC..............................................................2211.001.00-----------------------1.00---------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTCCAT..........................................................................................2211.001.00-----------------------------------1.00---------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTGTTAT...........................................................231.000.00-------------------------------------------1.00-------
........................................................................................................................................................................GAAGAGACCACGGAGCCTTTTA............................................................221.000.00--------1.00------------------------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTGTT.............................................................211.000.00---------------------1.00-----------------------------
.......................................................................................AGGTTGCTGGAGGATTAAATGAATAGGCATG....................................................................................................................................3111.001.00------1.00--------------------------------------------
.......................................................................................................................................AATAAGGCTCGGTAGTTTCTT..............................................................................................2111.001.00------------1.00--------------------------------------
......................................................................................................................................................................TGGAAGAGACCACGGAGCCTT...............................................................211.000.00------------------------------------------1.00--------
...................................................................................................................................................................GGCTGGAAGAGACCACGGAGCCTGCTTT...........................................................2811.001.00---------------------------1.00-----------------------
........GCTTTGGGATTAGATCCTTGACTCCTTGC.....................................................................................................................................................................................................................2911.001.00-------------------------------------------------1.00-
........................................................................................................................................................................GAAGAGACCACGGAGCCTGC..............................................................2011.001.00--------------------1.00------------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTT...............................................................191.000.00--------------------------1.00------------------------
.........................................................................................................................................TAAGGCTCGGTAGTTTCTTCCA...........................................................................................2211.001.00-------1.00-------------------------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTTCA...........................................................................................211.000.00-----------1.00---------------------------------------
.....................................................................................................................................................................................................................ACATATCCCTTCTTCTATTT.................201.000.00-1.00-------------------------------------------------
........................................................................................................................................................................GAAGAGACCACGGAGCCTTTT.............................................................211.000.00-------------1.00-------------------------------------
...........................................................................................TGCTGGAGGATTAAATGATGG..........................................................................................................................................211.000.00------------------1.00--------------------------------
...........................................................................................TGCTGGAGGATTAAATGAATAGGCAT.....................................................................................................................................2611.001.00-----1.00---------------------------------------------

Antisense strand
AGGCAGAGGCTTTGGGATTAGATCCTTGACTCCTTGCGTCAGTAGTTAAGGTTTGTTTAAATATAAAATGGGATGGCCCTTCTTACAAGGTTGCTGGAGGATTAAATGAATAGGCATGTGGAAAGCACCTAGTATAATAAGGCTCGGTAGTTTCTTCCATCAGGGCTGGAAGAGACCACGGAGCCTGCTTTCCTCCTTCGGCGTTTGGATCTCACATATCCCTTCTTCTCTGGCGATCAAAAATCCCTAT
...........................................................................................................................................((((((.((.((((((((((.......)))))))))).)).))))))................................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189782SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
..........................................................................................................................................AAGGCTCGGTAGTTTCTTTT............................................................................................ 205.000.00---5.00-----------------------------------------------
........................................................................................................................................GAAGAAACTACCGAGCCTTAT............................................................................................. 2113.003.00-------------------------1.00--1.00----------------1.00-----
.......................................................................................................................................................................CAGGCTCCGTGGTCTCTTCC............................................................... 2012.002.00-2.00-------------------------------------------------
.......................................................................................................................................GAAGAAACTACCGAGCCTTATT............................................................................................. 2212.002.00----------------1.00--1.00-------------------------------
................................ACCTTAACTACTGACGCAAG...................................................................................................................................................................................................... 2011.001.00-------------1.00-------------------------------------
..............................................................................................................................................................................................TGTGAGATCCAAACGCCGAAGGAGGA.................................. 2611.001.00-----1.00---------------------------------------------
...........................................................................................................................................AGGCTCGGTAGTTTCTTCCATT......................................................................................... 221.000.00-----------------------------------------1.00---------
...............................................................................TTCTTACAAGGTTGCTTCG........................................................................................................................................................ 191.000.00-1.00-------------------------------------------------
.......................................................................................................................................................................GCAGGCTCCGTGGTCTCTTCC.............................................................. 2111.001.00-----------------1.00---------------------------------
.....................................................................................................................................................................CTGGAAGAGACCACGG..................................................................... 161.000.00--------------------------------1.00------------------
............................................................................................................................................GGCTCGGTAGTTTCTTCATT.......................................................................................... 201.000.00--1.00------------------------------------------------
..........................................................................................................................................AAGGCTCGGTAGTTTCTTTT............................................................................................ 201.000.00-----------------------------1.00---------------------
........................................................................................................................................AAACTACCGAGCCTTAT................................................................................................. 1711.001.00------------------------------------------------1.00--
............................................................................................................................................GGCTCGGTAGTTTCTTCCTAT......................................................................................... 211.000.00--1.00------------------------------------------------
........................................................................................................................................ATAAGGCTCGGTAGTTTCTTCAT........................................................................................... 231.000.00--1.00------------------------------------------------
.......................................................................................................................................AAGAAACTACCGAGCCTTATT.............................................................................................. 2111.001.00-------------------------------1.00-------------------
........................ACTGACGCAAGGAGTCAAG............................................................................................................................................................................................................... 1911.001.00-------1.00-------------------------------------------
.........................................................................................................................................TAAGGCTCGGTAGTTTCTTCCT........................................................................................... 221.000.00--1.00------------------------------------------------
...............................CCTTGCGTCAGTAGTTAAGGTTC.................................................................................................................................................................................................... 231.000.00------------1.00--------------------------------------
......................................................................................................................................................................................................................TTGATCGCCAGAGAAGAAGGGATATG.......... 2611.001.00----------------------------------------------1.00----
...........................................................................................................................................AGGCTCGGTAGTTTCTTCCCT.......................................................................................... 211.000.00--1.00------------------------------------------------
.......................................................................................................................................AATAAGGCTCGGTAGTTTCTTCT............................................................................................ 2311.000.00------------------------------1.00--------------------
......................................................................................................................................................................CAGGCTCCGTGGTCTCTTCCA............................................................... 2111.001.00--------------1.00------------------------------------
.................................ACCTTAACTACTGACGCAA...................................................................................................................................................................................................... 1911.001.00----------------------------------------1.00----------
...................................................................................................................................................................................................................CCAGAGAAGAAGGGATATGTGA................. 2211.001.00--------------------------------------------1.00------
......................................................................................................................................................................AGCAGGCTCCGTGGTCTCTTCCA............................................................. 2311.001.00-1.00-------------------------------------------------