| (1) AGO2.ip | (10) B-CELL | (1) BRAIN | (1) BREAST | (11) CELL-LINE | (6) HEART | (1) HELA | (6) LIVER | (5) OTHER | (1) RRP40.ip | (4) SKIN | (1) UTERUS | (1) XRN.ip |
| GCAACTCTAATATTCAGATAAAGTTGGTTGGAGATTTCACACATGACCAGGTAACTGATTTTGTTGCTCTTGTTATTTTTTGGTGCATTTTGCATTTTGACTATATATGGAAGTTCTAGTGTCTATGGAGGAATCATATTCTTGGTTGTGGAAAAATTCATTAAGAGTAAGTATATTTGTATAGGATGGGTGAAAACCTACCCACGAACTTGGCTATGACTTATCTTTGAAGATAATGCTATTCACAGTG ...........................................................................................(((((..((((.........))))..)))))(((((.(((.((..((((((((...(((((....)))))))))))))...)).))).)))))..(((((....))))).................................................. ........................................................................................89.............................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR343334 | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR343336 | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR189784 | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR039614(GSM531977) HBV-infected Liver Tissue. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR207111(GSM721073) Whole cell RNA. (cell line) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189782 | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR038859(GSM458542) MM386. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | TAX577589(Rovira) total RNA. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343337 | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................TAGGATGGGTGAAAAAAA................................................... | 18 | 22.00 | 0.00 | 4.00 | 1.00 | - | 2.00 | - | - | 3.00 | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | |
| .....................................................................................................................................................................................TAGGATGGGTGAAAAAAAA.................................................. | 19 | 20.00 | 0.00 | 1.00 | 4.00 | - | 1.00 | 3.00 | - | - | - | 2.00 | - | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ......................GTTGGTTGGAGATTTCACACAT.............................................................................................................................................................................................................. | 22 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAGGATGGGTGAAAAAA.................................................... | 17 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | |
| ......CTAATATTCAGATAAAGTTGGTTGGAG......................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................ACTGATTTTGTTGCTCTTGTTATTTTTTGG....................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GATAAAGTTGGTTGGAGA........................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............AGATAAAGTTGGTTGGAGA........................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TATTCAGATAAAGTTGGTTGGAG......................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............TCAGATAAAGTTGGTTG............................................................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAGGATGGGTGAAAAGCG................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .............................................................................................ATTTTGACTATATATATAA.......................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TAGGATGGGTGAAAAACA................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............TCAGATAAAGTTGGTTGGA.......................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................ATTTTGCATTTTGACTATATATGGAA.......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................TTGCTCTTGTTATTTTGCT........................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCAACTCTAATATTCAGATAAAGTTGGTTGGAGATTTCACACATGACCAGGTAACTGATTTTGTTGCTCTTGTTATTTTTTGGTGCATTTTGCATTTTGACTATATATGGAAGTTCTAGTGTCTATGGAGGAATCATATTCTTGGTTGTGGAAAAATTCATTAAGAGTAAGTATATTTGTATAGGATGGGTGAAAACCTACCCACGAACTTGGCTATGACTTATCTTTGAAGATAATGCTATTCACAGTG ...........................................................................................(((((..((((.........))))..)))))(((((.(((.((..((((((((...(((((....)))))))))))))...)).))).)))))..(((((....))))).................................................. ........................................................................................89.............................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR343334 | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR343336 | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR189784 | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR039614(GSM531977) HBV-infected Liver Tissue. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR207111(GSM721073) Whole cell RNA. (cell line) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189782 | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR038859(GSM458542) MM386. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | TAX577589(Rovira) total RNA. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343337 | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................TGTATAGGATGGGTGAGA....................................................... | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| .................................................GGTAACTGATTTTGTTAG....................................................................................................................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................CCATAGACACTAGAACTTCCATATATAGTCA.......................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AAGTATATTTGTATAGCCT............................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .....................AGTTGGTTGGAGATTTCACG................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |