ID: uc003vqo.1_intron_2_0_chr7_130668869_r.5p
GENE: FLJ43663(2)
chr7:130791104-130791353-


(1)
AGO2.ip
(17)
B-CELL
(3)
BRAIN
(17)
BREAST
(26)
CELL-LINE
(8)
CERVIX
(7)
HEART
(3)
HELA
(8)
LIVER
(4)
OTHER
(1)
RRP40.ip
(37)
SKIN
(2)
UTERUS

Sense strand
CAGTCCTCCCTCGGTGTTAACGTCTGCTCCAGCTCGCAGCCCGCTGCTGGGTGAGTGGCGACATCAGGGCGAGGGTGAGCTTCGTCACGGGGAAAGCTGGAGGCTCCTGACAGCTCGTAGCCGTCCTCCCCTCGCCCCGCCCTAGGCGGAAGGTGTGGGTTGGGTGGTCCGAGGAGGGTGACGTCCAAGGTGGGGTGGGCACAGGCTCGGGATCCCTCGCAGCGCTAGGGGCCGCAGCCCCGGTCGCCGG
.....................................................................................................((((..(((....))).)))).(((..(((.(((((((((...)))))..)))).)))..)))......................................................................................
...................................................................................................100................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR038855(GSM458538)
D10. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
GSM532872(GSM532872)
G652T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
........................................................................................................TCCTGACAGCTCGTACTTT...............................................................................................................................1928.000.00---6.00----2.00---1.001.00-------2.00--------1.00---1.00-------1.00--------2.001.00-1.00------------1.00-1.00-----1.00--------1.00-1.00---------------------1.00------1.00--------1.00--1.00------
.......................................................................................................CTCCTGACAGCTCGTACTTT...............................................................................................................................2023.000.00---2.00--------1.001.00-------1.00--------------1.00---------------1.00---1.00-2.00--1.00---1.001.00------------1.00-1.00-1.00--------1.00--1.00---------1.001.00---------1.00----1.00----1.00-------
........................................................................................................TCCTGACAGCTCGTAGTTTT..............................................................................................................................209.000.00--9.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................ACGGGGAAAGCTGGAGGCTCCTGAC...........................................................................................................................................2513.003.00--------------------------1.00---------1.00-----------1.00-------------------------------------------------------------------------------------
.........................................................................................GGGAAAGCTGGAGGCTCCTGAC...........................................................................................................................................2213.003.00------------------3.00-------------------------------------------------------------------------------------------------------------------
...................................................................................GTCACGGGGAAAGCTGGAGGCTCCTGAC...........................................................................................................................................2813.003.00-------------1.00-----------------------1.00----------------1.00-------------------------------------------------------------------------------
..................................................................................CGTCACGGGGAAAGCTGGAGGCTCCTGAC...........................................................................................................................................2913.003.00----------------------------------1.00-------------1.00-------------------------------1.00-----------------------------------------------------
............................................................................................AAAGCTGGAGGCTCCTGAC...........................................................................................................................................1912.002.00-----2.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CTCCTGACAGCTCGTACT.................................................................................................................................181.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------
...............GTTAACGTCTGCTCCAGCTCGCCGCC.................................................................................................................................................................................................................261.000.00-----------------------------------------------------------1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................CGCTAGGGGCCGCAGCCCCGG.......2111.001.00------------------------------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................................................................................................................................CCTCGCAGCGCTAGGG....................1611.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................CGCTAGGGGCCGCAGCCCCGGT......2211.001.00---------------------------------------------------------------------------------------------------------------------1.00----------------
.......................................................................................................CTCCTGACAGCTCGTACCTT...............................................................................................................................201.000.00--------1.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CTCCTGACAGCTCGTAC..................................................................................................................................171.000.00-----------------------------------------------------------------------------------------------------------------------------1.00--------
.................................TCGCAGCCCGCTGCTTTG.......................................................................................................................................................................................................181.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................AAGCTGGAGGCTCCTGAC...........................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------1.00-----------------------------
....................................................................................TCACGGGGAAAGCTGGAGGCTCCTGAC...........................................................................................................................................2711.001.00--------------------------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................CCTAGGCGGAAGGTGTGGGTTG........................................................................................2211.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CTCCTGACAGCTCGTAG..................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................CCCTAGGCGGAAGGTGTGGGTTGG.......................................................................................2411.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.................................TCGCAGCCCGCTGCTGTCT......................................................................................................................................................................................................191.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................TCCTCCCCTCGCCCCTGC.............................................................................................................181.000.00-----------------------------------------------1.00--------------------------------------------------------------------------------------
...............GTTAACGTCTGCTCCAGC.........................................................................................................................................................................................................................1811.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................GGGAAAGCTGGAGGCTCCTGACAG.........................................................................................................................................2411.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------
..........................................................................................................CTGACAGCTCGTAGC.................................................................................................................................1511.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................CCCGCCCTAGGCGGAAGGTGTGG............................................................................................2311.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------
................................................................CAGGGCGAGGGTGAGCTTCGTC....................................................................................................................................................................2211.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................GTCACGGGGAAAGCTGGAG....................................................................................................................................................1911.001.00------------------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................TGGCGACATCAGGGCGAGGGTGAGCTT........................................................................................................................................................................2711.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------
.............................................................................................AAGCTGGAGGCTCCTGACAG.........................................................................................................................................2011.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GGGGCCGCAGCCCCGTCCC....191.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................CCTCGCAGCGCTAGGGGCCG................2011.001.00---------------------------------------------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCTCGGGATCCCT.................................1711.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................ATCAGGGCGAGGGTGAGCTTC.......................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------------------------------1.00----------------------
...........................................CTGCTGGGTGAGTGGCGACC...........................................................................................................................................................................................201.000.00--------------------------------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCAGCGCTAGGGGCCGCAGC............2011.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................AGGGCGAGGGTGAGCTT........................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------1.00------------------------------------
..............................................................................................AGCTGGAGGCTCCTGA............................................................................................................................................1650.200.20---------------------------------------------------------------0.20----------------------------------------------------------------------

Antisense strand
CAGTCCTCCCTCGGTGTTAACGTCTGCTCCAGCTCGCAGCCCGCTGCTGGGTGAGTGGCGACATCAGGGCGAGGGTGAGCTTCGTCACGGGGAAAGCTGGAGGCTCCTGACAGCTCGTAGCCGTCCTCCCCTCGCCCCGCCCTAGGCGGAAGGTGTGGGTTGGGTGGTCCGAGGAGGGTGACGTCCAAGGTGGGGTGGGCACAGGCTCGGGATCCCTCGCAGCGCTAGGGGCCGCAGCCCCGGTCGCCGG
.....................................................................................................((((..(((....))).)))).(((..(((.(((((((((...)))))..)))).)))..)))......................................................................................
...................................................................................................100................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR038855(GSM458538)
D10. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
GSM532872(GSM532872)
G652T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
................CGAGCTGGAGCAGACGTTAA...................................................................................................................................................................................................................... 2018.008.004.00------1.00-----1.00-------------------------1.001.00---------------------------------------------------------------------------------------------
..................CGAGCTGGAGCAGACGTT...................................................................................................................................................................................................................... 1816.006.00-1.00--------1.00----------------1.00----------------------1.00------------------------------------------1.00------1.00---------------------------------
..................CGGGCTGCGAGCTGGAGCAGACGTT............................................................................................................................................................................................................... 2515.005.00-1.00--------------------1.00-----------------------------------------------1.00-------1.00---------------1.00---------------------------------------
................GCGAGCTGGAGCAGACGTTAA..................................................................................................................................................................................................................... 2115.005.001.00-----------------------2.00------------------1.00-------------1.00----------------------------------------------------------------------------
......................GCGGGCTGCGAGCTGGAGCAGA.............................................................................................................................................................................................................. 2215.005.00----------------------------------------1.00------1.00-----------------------------------------------------------1.00-1.00---1.00--------------------
.....................CAGCAGCGGGCTGCGAGCTGGAGCAGAC......................................................................................................................................................................................................... 2815.005.00------2.00-------2.00-------1.00---------------------------------------------------------------------------------------------------------------
..........................................GTCGCCACTCACCCAGCAGC............................................................................................................................................................................................ 2015.005.00----4.00--------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................................................................GGGGCCGCAGCCCCGGGG..... 183.000.00-----1.00-------------1.00------------------------------------------------------------------------------------------1.00-----------------------
................................ACCCAGCAGCGGGCTGCGAG...................................................................................................................................................................................................... 2013.003.001.00------------------------------------------------------1.00-1.00----------------------------------------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGCCT................................................................................................................................................ 193.000.00--------------------1.00---------------------------------------------------------------------------1.00----------------------1.00--------------
..................CTGCGAGCTGGAGCAGACGTT................................................................................................................................................................................................................... 2113.003.00----------1.00-----------------------------------1.00--------------------------1.00------------------------------------------------------------
...................................................................................................................................................................................................................................GGGGCCGCAGCCCCGGGGG.... 193.000.00-----------------2.00--------------------------------------------------------------------------------------------------------------1.00-----
....................CTGCGAGCTGGAGCAGACG................................................................................................................................................................................................................... 1913.003.003.00-------------------------------------------------------------------------------------------------------------------------------------
...................CGGGCTGCGAGCTGGAGCAGACGT............................................................................................................................................................................................................... 2413.003.00-1.00------------------------------------------------------------------1.00-------1.00---------------------------------------------------------
....................GCGGGCTGCGAGCTGGAGCAGACG.............................................................................................................................................................................................................. 2413.003.00------1.00-------1.00--------------------------------------------------------1.00--------------------------------------------------------------
...................GGGCTGCGAGCTGGAGCAGACGT................................................................................................................................................................................................................ 2313.003.00-----------------------1.00-----2.00--------------------------------------------------------------------------------------------------------
.....................GCAGCGGGCTGCGAGCTGGAGCAGAC........................................................................................................................................................................................................... 2613.003.00----------------3.00---------------------------------------------------------------------------------------------------------------------
..........................CAGCGGGCTGCGAGCTGGAG............................................................................................................................................................................................................ 2012.002.00-----------------------------------1.00----------------------------------------------------------------------------------------------1.00---
.....ACGTTAACACCGAGGGAG................................................................................................................................................................................................................................... 1812.002.00---------------------------------2.00----------------------------------------------------------------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGAAT................................................................................................................................................ 192.000.00--------------------------------------1.00---------------------1.00-------------------------------------------------------------------------
..........................GCGGGCTGCGAGCTGGAG.............................................................................................................................................................................................................. 1822.002.000.50--------------------------0.500.50--------------------------------0.50------------------------------------------------------------------------
................TGCGAGCTGGAGCAGACGTTAA.................................................................................................................................................................................................................... 2212.002.00-------1.00-1.00----------------------------------------------------------------------------------------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGACT................................................................................................................................................ 192.000.00--------------------1.00--------------------------------------1.00--------------------------------------------------------------------------
....................CGGGCTGCGAGCTGGAGCAGACG............................................................................................................................................................................................................... 2312.002.00---------------------------------------------1.00------------------------------------------------------------------------1.00---------------
......................CGGGCTGCGAGCTGGAGCAGA............................................................................................................................................................................................................... 2112.002.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------
.......................GCGGGCTGCGAGCTGGAGCAG.............................................................................................................................................................................................................. 2112.002.00---------2.00----------------------------------------------------------------------------------------------------------------------------
.................TGCGAGCTGGAGCAGACGTTA.................................................................................................................................................................................................................... 2112.002.00-----------------------------------------2.00--------------------------------------------------------------------------------------------
...................GCGAGCTGGAGCAGACGT..................................................................................................................................................................................................................... 1812.002.001.00------------------------------1.00------------------------------------------------------------------------------------------------------
.TAACACCGAGGGAGGACT....................................................................................................................................................................................................................................... 1812.002.00-----------2.00--------------------------------------------------------------------------------------------------------------------------
........................CAGCGGGCTGCGAGCTGGAGCA............................................................................................................................................................................................................ 2212.002.00------1.00-------1.00-----------------------------------------------------------------------------------------------------------------------
......................GCTGCGAGCTGGAGCAGA.................................................................................................................................................................................................................. 1812.002.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCTCGGGATCCCCG................................ 182.000.00------------2.00-------------------------------------------------------------------------------------------------------------------------
...................ACGTCTGCTCCAGCTCGCAGCCCGA.............................................................................................................................................................................................................. 252.000.00-2.00------------------------------------------------------------------------------------------------------------------------------------
..........................AGCGGGCTGCGAGCTGGAG............................................................................................................................................................................................................. 1921.501.501.00---------------0.50---------------------------------------------------------------------------------------------------------------------
....................CAGCGGGCTGCGAGCTGGAGCAGACG............................................................................................................................................................................................................ 2611.001.00----------------------------------------------------------------1.00---------------------------------------------------------------------
....................................CAGCCCGCTGCTGGGGGAC................................................................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------1.00----------------------------------
...........CGGGCTGCGAGCTGGAGCAGACGTTAACACCG............................................................................................................................................................................................................... 3211.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------
.............GAGCTGGAGCAGACGTTAACAC....................................................................................................................................................................................................................... 2211.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................CTCACCCTCGCCCTGATGTCGCCACT........................................................................................................................................................................... 2611.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.................GAGCTGGAGCAGACGTTA....................................................................................................................................................................................................................... 1811.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------
....................GCTGCGAGCTGGAGCAGACG.................................................................................................................................................................................................................. 2011.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------
...ACGTTAACACCGAGGGAGGA................................................................................................................................................................................................................................... 2011.001.00--------------------------------------------------------------------------------------------------1.00-----------------------------------
..................CAGCAGCGGGCTGCGAGCTGGAGCAGACGTT......................................................................................................................................................................................................... 3111.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------
.................................................................................................................................CCTCGCCCCGCCCTAAAG....................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------1.00------------------------------
....................CGTCTGCTCCAGCTCGCGT................................................................................................................................................................................................................... 191.000.00-------------------------------------------1.00------------------------------------------------------------------------------------------
.............GCGAGCTGGAGCAGACGTTAACAC..................................................................................................................................................................................................................... 2411.001.00------------------------------------------------------------------------1.00-------------------------------------------------------------
.........................................................CTCACCCTCGCCCTGATGTCGC........................................................................................................................................................................... 2211.001.00---------------------------------------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................................................................................................................CCGGCGACCGGGGCTGCGGC 2011.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------
............................CAGCAGCGGGCTGCGAGCTGG......................................................................................................................................................................................................... 2111.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
.........................GCGGGCTGCGAGCTGGAGC.............................................................................................................................................................................................................. 1911.001.00-------------------------------------------------------------------------------------------1.00------------------------------------------
...GTTAACACCGAGGGAGGA..................................................................................................................................................................................................................................... 1811.001.00------------------------------------------------------------------------------------------------------------------1.00-------------------
...................CACCCAGCAGCGGGCTGCGAGCTGGAGCAGACGT..................................................................................................................................................................................................... 3411.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------
................CTGCGAGCTGGAGCAGACGTTAA................................................................................................................................................................................................................... 2311.001.00---------------------------------------1.00----------------------------------------------------------------------------------------------
......GCTGGAGCAGACGTTAACACCGAGGGA......................................................................................................................................................................................................................... 2711.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGA.................................................................................................................................................. 171.000.00-----------------------------------------------------------------------------------------------------1.00--------------------------------
..............TGTTAACGTCTGCTCCAGCTCGCACG.................................................................................................................................................................................................................. 261.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................TCCCCGTGACGAAGCTCACCC............................................................................................................................................................. 2111.001.00------------------------------------------------------------------------------------------------------------------------1.00-------------
.......................GGGCTGCGAGCTGGAGCAG................................................................................................................................................................................................................ 1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CGGGATCCCTCGCAGCGG......................... 181.000.00--------------------------------------------------------------------------------------------------------------------------1.00-----------
.................GCGAGCTGGAGCAGACGTTA..................................................................................................................................................................................................................... 2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
......................CAGCAGCGGGCTGCGAGCTGGAGCAGA......................................................................................................................................................................................................... 2711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.....................CGGGCTGCGAGCTGGAGCAGAC............................................................................................................................................................................................................... 2211.001.00----------------------------------------------------------------------------------1.00---------------------------------------------------
..........................CTCCAGCTCGCAGCCCGAA............................................................................................................................................................................................................. 191.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------
......................................ACTCACCCAGCAGCGGGC.................................................................................................................................................................................................. 1811.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------
.................CGGGCTGCGAGCTGGAGCAGACGTTA............................................................................................................................................................................................................... 2611.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CTACGAGCTGTCAGGAG.................................................................................................................................. 1711.001.00-----------------------------------------------------------------------------------------1.00--------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGAA................................................................................................................................................. 181.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------
.....................GCGGGCTGCGAGCTGGAGCAGAC.............................................................................................................................................................................................................. 2311.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
..........................................GATGTCGCCACTCACCCAGCAGC......................................................................................................................................................................................... 2311.001.00---------------------------------------------------------------------------------------1.00----------------------------------------------
............................................................................................................................................................................ACCTTGGACGTCACCCTCC........................................................... 1911.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------
..........................CAGCAGCGGGCTGCGAGCTGGAG......................................................................................................................................................................................................... 2311.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCTACGAGCTGTCAGG............................................................................................................................... 1811.001.00----------------------------------------------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CAGCCCCGGTCGCCGGGGGC 201.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------
................TTAACGTCTGCTCCAGCTCGCAGCAA................................................................................................................................................................................................................ 261.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................CGGGGAAAGCTGGAGGCTT................................................................................................................................................ 191.000.00--------------------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................AGGGATCCCGAGCCTGTG................................. 1811.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GGTTGGGTGGTCCGAG............................................................................. 161.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCTAGCGCTGCGAGGGAT..................... 1811.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------
.............................CCAGCAGCGGGCTGCGAGCTG........................................................................................................................................................................................................ 2111.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................GACAGCTCGTAGCCGCGGA........................................................................................................................... 191.000.00----------------------------------------------------------------------------------------1.00---------------------------------------------
..................TGCGAGCTGGAGCAGACGTT.................................................................................................................................................................................................................... 2011.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------
.................................................................................CAGCTTTCCCCGTGACGA....................................................................................................................................................... 1811.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------
.........................CAGCGGGCTGCGAGCTGGAGC............................................................................................................................................................................................................ 2111.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CACCCCACCTTGGACGTCACC..................................................... 2111.001.00------------------------------------------------------------------------------------------1.00-------------------------------------------
.....................................TGATGTCGCCACTCACCCAGCAGCGGGCT........................................................................................................................................................................................ 2911.001.00-------------------------------------1.00------------------------------------------------------------------------------------------------
......................TCTGCTCCAGCTCGCAGCCCGAA............................................................................................................................................................................................................. 231.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------
..................GGGCTGCGAGCTGGAGCAGACGTT................................................................................................................................................................................................................ 2411.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
............................AGCAGCGGGCTGCGAGCTGG.......................................................................................................................................................................................................... 2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GCGACCGGGGCTGCGGCC... 1811.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------
..........................GCAGCGGGCTGCGAGCTGGAG........................................................................................................................................................................................................... 2111.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
................GAGCTGGAGCAGACGTTAA....................................................................................................................................................................................................................... 1911.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------
.AGTCCTCCCTCGGTGTTAACGTTAA................................................................................................................................................................................................................................ 251.000.00-----------------------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................GGGCGAGGGGAGGACGGC................................................................................................................. 1820.500.50--------------------------0.50-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CCGAGCCTGTGCCCACCC........................................ 1820.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50--
.............................AGCGGGCTGCGAGCTG............................................................................................................................................................................................................. 1620.500.50--------------------------------------------------------------0.50-----------------------------------------------------------------------
..............................................................................TCCCCGTGACGAAGC............................................................................................................................................................. 1520.500.50-------------------------0.50------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGAGGGGAGGACGGC.................................................................................................................... 1540.250.25------------------------------------------------------------------------------------------------------------------------------------0.25-
.........................................ACTCACCCAGCAGCG.................................................................................................................................................................................................. 1570.140.14-------------------------------------------------------------------------------------------------------------------------------------0.14
..................................................................................................................................................................................................................................GGGGCTGCGGCCCCT......... 1590.110.11-----------------0.11--------------------------------------------------------------------------------------------------------------------