| (2) B-CELL | (3) BRAIN | (3) BREAST | (19) CELL-LINE | (4) CERVIX | (1) FIBROBLAST | (2) HEART | (1) LIVER | (1) OTHER | (10) SKIN | (1) TESTES | (1) XRN.ip |
| TGACCAAGCCATGCTCGGATACTTCTGAGAGCGACCTTGAGACCAGAAAGGTGAGTAGTAACCTTGGTAGCCAGATAAGCAGAAAGGAGGAGGAGATCCTGGGAAGAAGCATTGCCTCCACAACCCTTTCAACCAGGCAAGGGATTTGTAGAGAAGCTTCTGGGATCTCTGAAGTGTCTACAGTGGTTCCCATCTTAATGGAAAGTGGGTGCTCCCTTTTCCTGTGAAGTTATGGGGAGAGTGGAACACA .............................................................((((....((.......))...))))...(((....)))...................................................................................................................................................... .............................................................62...................................................115..................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR553576(SRX182782) source: Testis. (testes) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR040035(GSM532920) G001T. (cervix) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR040034(GSM532919) G001N. (cervix) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR191573(GSM715683) 68genomic small RNA (size selected RNA from t. (breast) | SRR040037(GSM532922) G243T. (cervix) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR189782 | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577589(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040043(GSM532928) G428T. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR444056(SRX128904) Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR444062(SRX128910) Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR029128(GSM416757) H520. (cell line) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR037938(GSM510476) 293Red. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................GAGATCCTGGGAAGAAGAA........................................................................................................................................... | 19 | 12.00 | 0.00 | 8.00 | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................GAGATCCTGGGAAGAAAAA........................................................................................................................................... | 19 | 5 | 8.20 | 0.80 | 0.60 | 1.00 | 0.40 | 3.20 | 1.80 | - | - | - | - | - | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.60 | - | - | - | 0.20 | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAGAAAA......................................................................................................................................... | 21 | 5.00 | 0.00 | - | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................GAGATCCTGGGAAGAAAAAA.......................................................................................................................................... | 20 | 5 | 3.60 | 0.80 | 0.60 | - | 2.00 | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | 0.20 | - | 0.20 | - | 0.20 | - | - |
| ..........................................................................................AGGAGATCCTGGGAAAAAA............................................................................................................................................. | 19 | 3.00 | 0.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................GGAGATCCTGGGAAGAAAAAA.......................................................................................................................................... | 21 | 3.00 | 0.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................AGGAGGAGATCCTGGGT.................................................................................................................................................. | 17 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................ACCAGGCAAGGGATTTGTAGAGAAGC............................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGACAAG........................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................GTAGCCAGATAAGCACTAC..................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................GGAGATCCTGGGAAGTAAA............................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................GCAGAAAGGAGGAGGAGATCCTGGGA.................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GGAGATCCTGGGAAGAAG............................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGTCTACAGTGGTTCGATA......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................GGATACTTCTGAGAGC.......................................................................................................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAGAAAT......................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TGTCTACAGTGGTTCGGTC......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................GAGATCCTGGGAAGAAGA............................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................AAGCAGAAAGGAGGAGGAG........................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................AGCAGAAAGGAGGAGGTGA.......................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................GGAGATCCTGGGAAGCCCC............................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................CCTGGGAAGAAGCATATA....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................AAGGAGGAGGAGATCCTGGGAAGAAGCAT.......................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................ATGGGGAGAGTGGAACTCTG | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................AAGGAGGAGGAGATCCAT..................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................AAGCTTCTGGGATCTGGC............................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................GAGATCCTGGGAAGAA.............................................................................................................................................. | 16 | 5 | 0.80 | 0.80 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.40 | 0.20 | - | - | 0.20 | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAAGAA.......................................................................................................................................... | 20 | 5 | 0.80 | 0.80 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | 0.60 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAATA........................................................................................................................................... | 19 | 5 | 0.20 | 0.80 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAAATA.......................................................................................................................................... | 20 | 5 | 0.20 | 0.80 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGATCCTGGGAAGAAAAGG.......................................................................................................................................... | 20 | 5 | 0.20 | 0.80 | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................AGATCCTGGGAAGAAG............................................................................................................................................. | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| TGACCAAGCCATGCTCGGATACTTCTGAGAGCGACCTTGAGACCAGAAAGGTGAGTAGTAACCTTGGTAGCCAGATAAGCAGAAAGGAGGAGGAGATCCTGGGAAGAAGCATTGCCTCCACAACCCTTTCAACCAGGCAAGGGATTTGTAGAGAAGCTTCTGGGATCTCTGAAGTGTCTACAGTGGTTCCCATCTTAATGGAAAGTGGGTGCTCCCTTTTCCTGTGAAGTTATGGGGAGAGTGGAACACA .............................................................((((....((.......))...))))...(((....)))...................................................................................................................................................... .............................................................62...................................................115..................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR553576(SRX182782) source: Testis. (testes) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR040035(GSM532920) G001T. (cervix) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR040034(GSM532919) G001N. (cervix) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR191573(GSM715683) 68genomic small RNA (size selected RNA from t. (breast) | SRR040037(GSM532922) G243T. (cervix) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR189782 | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577589(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040043(GSM532928) G428T. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR444056(SRX128904) Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR444062(SRX128910) Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR029128(GSM416757) H520. (cell line) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR037938(GSM510476) 293Red. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................ACCAGGCAAGGGATTGGAG.................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................ACCAGGCAAGGGATTGGA..................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTAAGATGGGAACCACTGTAGACA................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................CCACAACCCTTTCAACTAA.................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................TTCTGAGAGCGACCTTTCT................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................CCTCCTTTCTGCTTATCT................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GTTGTGGAGGCAATG.............................................................................................................................. | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - |
| ...........................................................................................................................................................................................TCCATTAAGATGGGA................................................ | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - |