ID: uc003vmu.2_intron_13_0_chr7_128045920_r.3p
GENE: IMPDH1(3)
chr7:128045870-128046119-


(5)
AGO2.ip 		(8)
B-CELL 		(1)
BRAIN 		(14)
BREAST 		(25)
CELL-LINE 		(8)
CERVIX 		(3)
HEART 		(3)
HELA 		(3)
LIVER 		(2)
OTHER 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AAGGGCGGGAGGGGCGGGAGGACAGGGCGGCGCCCTGGCCCGCCCTGCCGCTGCCGCAGCCCCCGCCCCCGCCCCCGGCCCGCCCGGCCCGCGGCAGCAGCGTGGCCGCGGCGCGGCGTCAGCAGTAGCAGCAGCAGCAGCGGCGGCAGCGGCGGGCGGCCGCGCGGGTGTTTATGTCGGGTCGCGGGGTCTCGCGGCAGCATGGCGGACTACCTGATCAGCGGCGGCACCGGCTACGTGCCCGAGGATG
....................................................................................................................((((.((.((.((.((.((....)).)).)).)).)).))))............................................................................................
................................................................................................................113............................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................CGGCGGCAGCGGCGGG..............................................................................................1609.009.00--3.001.004.00------------1.00--------------------------------------------------------------------
...........................................................................................................................................GCGGCGGCAGCGGCGGG..............................................................................................1707.007.00--1.001.001.00--3.00-----1.00------------------------------------------------------------------------
.....................................................................................................................GTCAGCAGTAGCAGCAGCAG.................................................................................................................2016.006.004.00----2.00--------------------------------------------------------------------------------
.................................................................................................................CGGCGTCAGCAGTAGCAG.......................................................................................................................1814.004.00------3.00----1.00--------------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGCGGC..........................................................................................2013.003.00----1.00----2.00----------------------------------------------------------------------------
.............................................................................................................................................GGCGGCAGCGGCGGG..............................................................................................1503.003.00---3.00----------------------------------------------------------------------------------
....................................................................................................................................................................................GTCGCGGGGTCTCGCGGC....................................................1822.502.501.50----------1.00--------------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGAC............................................................................................1802.009.00-----------------------------------------1.00----------1.00---------------------------------
............................................................................................................................................................................................................GCGGACTACCTGATCAGCGGCGGC......................2412.002.00-----2.00--------------------------------------------------------------------------------
................................................................................................................................................................................................CGCGGCAGCATGGCGGACT.......................................1912.002.00------------------------------------1.00------------------------1.00------------------------
....................................................................................................................CGTCAGCAGTAGCAGCAGC...................................................................................................................1912.002.00--------------------------------------1.00------1.00----------------------------------------
.........................................................................................................................................CAGCGGCGGCAGCGGCGGG..............................................................................................1931.671.67--0.67--------------1.00--------------------------------------------------------------------
...........................................................................................CGGCAGCAGCGTGGCCGCGGCGC........................................................................................................................................2311.001.00-------------------------------------------------------1.00------------------------------
..............................................................................................................GCGCGGCGTCAGCAGTAGCA........................................................................................................................2011.001.00-----------------------------------------------1.00--------------------------------------
.....................................................................................................................................................CGGCGGGCGGCCGCGCGGG..................................................................................1911.001.00-------------------------------------------------1.00------------------------------------
....................................................................CCGCCCCCGGCCCGCCCGGCCCGGG.............................................................................................................................................................251.000.00----------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................TCTCGCGGCAGCATGGCGGACTACCTGAT................................2911.001.00------------------------------------------------1.00-------------------------------------
..........GGGGCGGGAGGACAGGGCGGC...........................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00--------------------------
.............................................................................................................GGCGCGGCGTCAGCAGTAGAA........................................................................................................................211.000.00-------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................TACCTGATCAGCGGCGGCACCGGCTAACTG..........301.000.00-1.00------------------------------------------------------------------------------------
...........................................................................CGGCCCGCCCGGCCCGCG.............................................................................................................................................................1811.001.00--------------------------------------------------------1.00-----------------------------
........................................................................................................................................................CGGGCGGCCGCGCGGGAGTA..............................................................................201.000.00----------------------------------------1.00---------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGAT............................................................................................1801.009.00--1.00-----------------------------------------------------------------------------------
.........................................................................................CGCGGCAGCAGCGTGGAGAG.............................................................................................................................................201.000.00---------------------------------------------------------------1.00----------------------
................................................................................................................................................................................................................ACTACCTGATCAGCGGCGGCACC...................2311.001.00------------------1.00-------------------------------------------------------------------
................................................................................CGCCCGGCCCGCGGCTGG........................................................................................................................................................181.000.00----------1.00---------------------------------------------------------------------------
..............................................................................................................................................................................................................GGACTACCTGATCAGCGGCGGCACCGGCTACG............3211.001.00----------------1.00---------------------------------------------------------------------
........................................................................................................................................................CGGGCGGCCGCGCGGCGCC...............................................................................191.000.00-------------------------------1.00------------------------------------------------------
.....................................................................................................................GTCAGCAGTAGCAGCAGCTG.................................................................................................................201.000.001.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CTACCTGATCAGCGGCGGC......................1911.001.00-------------------------------------------------------------------1.00------------------
........................................................................................................................AGCAGTAGCAGCAGCAGCAGGGGG..........................................................................................................241.000.00--------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................GCGGCAGCATGGCGGACGT......................................191.000.00-----------------------------1.00--------------------------------------------------------
.................................................................................................................CGGCGTCAGCAGTAGCAGCAGCAGCAGCGGCG.........................................................................................................3211.001.00------------------1.00-------------------------------------------------------------------
..............................................................................CCCGCCCGGCCCGCGGCAGCAGCGTGGCCGCGGCGCGGCGTCAGCAGTAGCAGCAGCAGCAG..............................................................................................................6211.001.00---------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................................GGCAGCATGGCGGACTACCTGAAA...............................241.000.00--------------------------------------------------------------------1.00-----------------
............................................................................................................................................................................................GTCTCGCGGCAGCATGGCGGACT.......................................2311.001.00---------------------------------------1.00----------------------------------------------
...............................................................................................................................................CGGCAGCGGCGGGCGCGG.........................................................................................181.000.00--------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................CGGACTACCTGATCAGCGGC.........................2021.001.00------0.50-----0.50-------------------------------------------------------------------------
..................................................................................................................................................................................................................TACCTGATCAGCGGCGGCACCGGCT...............2511.001.00-1.00------------------------------------------------------------------------------------
...........................................................................................................................................GCGGCGGCAGCGGCGGGAA............................................................................................1901.007.00-------------1.00------------------------------------------------------------------------
..........................................................................................................................................................................................................TGGCGGACTACCTGATCAGCGGCGGCAC....................2811.001.00----------------1.00---------------------------------------------------------------------
.........................................................................CCCGGCCCGCCCGGCGCG...............................................................................................................................................................181.000.00----------------------------1.00---------------------------------------------------------
.....................................................................CGCCCCCGGCCCGCCCGGCCCGCGGCAGCAGCG....................................................................................................................................................3311.001.00------1.00-------------------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGCGGCGGG.......................................................................................2311.003.00--1.00-----------------------------------------------------------------------------------
.............................................................CCCGCCCCCGCCCCCGGCGCGC.......................................................................................................................................................................221.000.00------------------------1.00-------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGAAGA...........................................................................................191.000.00-----------------------------------------------------1.00--------------------------------
............................................................................................................................................................................TATGTCGGGTCGCGGGGTCTCGCGGCC...................................................271.000.00------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................TGGCGGACTACCTGATCAGCGGCGGC......................2611.001.00-1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TGGCGGACTACCTGATCAGCGGCGGT......................261.000.00-1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................CTCGCGGCAGCATGGCGGA.........................................1911.001.00------------1.00-------------------------------------------------------------------------
.............................................................................................................................................GGCGGCAGCGGCGGGAT............................................................................................1701.003.00--------------------------1.00-----------------------------------------------------------
...........................................................................................................................................GCGGCGGCAGCGGCGGGACC...........................................................................................2001.007.00---------1.00----------------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGACC...........................................................................................1901.009.00---------------------------------1.00----------------------------------------------------
.........AGGGGCGGGAGGACAGGGCGA............................................................................................................................................................................................................................211.000.00-1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GGACTACCTGATCAGCGGCGG.......................2111.001.00-----1.00--------------------------------------------------------------------------------
...............................................................................................................................................CGGCAGCGGCGGGCGGGGCC.......................................................................................201.000.00---------------------------1.00----------------------------------------------------------
..........................................................................................GCGGCAGCAGCGTGGCCGCGGCGCGG......................................................................................................................................2611.001.00--------------------1.00-----------------------------------------------------------------
..............................................................................................................................................GCGGCAGCGGCGGGCGGCC.........................................................................................1911.001.00-------------------------1.00------------------------------------------------------------
..............................................................................................................GCGCGGCGTCAGCAGTAGCAGCAGCAGCA...............................................................................................................2911.001.00--------------------------------------------1.00-----------------------------------------
...............................................................................................AGCAGCGTGGCCGCGGCGCG.......................................................................................................................................2011.001.00------------1.00-------------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGCGGCAGAG......................................................................................2411.003.00--1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................CGGACTACCTGATCAGCGA..........................191.000.00-------------------------------------------1.00------------------------------------------
..........................................................................................................................................................GGCGGCCGCGCGGGTCGGG.............................................................................191.000.00----------------------------------------------------------1.00---------------------------
........................................................................................................GCCGCGGCGCGGCGTCCGG...............................................................................................................................191.000.00---------------------------------------------------------1.00----------------------------
......................................................................................................................TCAGCAGTAGCAGCAGCAGCAG..............................................................................................................2221.001.00-----------1.00--------------------------------------------------------------------------
........................................................................................................................................GCAGCGGCGGCAGCGGGA................................................................................................181.000.00-------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................ATGTCGGGTCGCGGGG.............................................................1631.001.00-1.00------------------------------------------------------------------------------------
...............................................................................................................................................CGGCAGCGGCGGGCGGCGGC.......................................................................................201.000.00------------------------------------------1.00-------------------------------------------
........................................................................................................................................GCAGCGGCGGCAGCGGCGGG..............................................................................................2031.001.00--0.330.33-----0.33----------------------------------------------------------------------------
..................................................................................................................................................................CGCGGGTGTTTATGTCGGGT....................................................................2011.001.00---------------------1.00----------------------------------------------------------------
.....................................................................................................................................GCAGCAGCGGCGGCAGCGGGAC...............................................................................................221.000.00---1.00----------------------------------------------------------------------------------
...................................................................................................GCGTGGCCGCGGCGCGGCGTTT.................................................................................................................................221.000.00------------------------------------------------------------1.00-------------------------
.................................................................................................................CGGCGTCAGCAGTAGCAGCAACAG.................................................................................................................241.000.00----------------------1.00---------------------------------------------------------------
..............................................................................................................................................GCGGCAGCGGCGGGCGGC..........................................................................................1811.001.00--------------------------------1.00-----------------------------------------------------
.........................................................................................................................................................GGGCGGCCGCGCGGGTCG...............................................................................181.000.00-----------------------------------1.00--------------------------------------------------
......................................................................................................................................................................................................AGCATGGCGGACTACCTGA.................................1930.670.67--------0.33-0.33---------------------------------------------------------------------------
....................................................................CCGCCCCCGGCCCGCCCGG...................................................................................................................................................................1930.670.67------------------------------------------------------------------------------0.330.33------
.........................................................................................................................................CAGCGGCGGCAGCGGCGGGGGG...........................................................................................2230.671.67--0.33----------0.33------------------------------------------------------------------------
....GCGGGAGGGGCGGGAGGAC...................................................................................................................................................................................................................................1920.500.50------------------------------------------------------------------------0.50-------------
.....................................................................................................................................................CGGCGGGCGGCCGCGCGG...................................................................................1820.500.50--------0.50-----------------------------------------------------------------------------
.......................................................................................................................................................................GTGTTTATGTCGGGTCGCG................................................................1920.500.50--------------------------------------------------------------------------0.50-----------
.........................................................................................................................................................................................................ATGGCGGACTACCTGATCAGCGGC.........................2420.500.50--------------0.50-----------------------------------------------------------------------
............................................................................................................................................CGGCGGCAGCGGCGGGCGG...........................................................................................1920.500.50-------------0.50------------------------------------------------------------------------
..........GGGGCGGGAGGACAGGG...............................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------------0.50----------
....................................................................................................................................................................CGGGTGTTTATGTCGGGTCGCGGGGT............................................................2620.500.50-0.50------------------------------------------------------------------------------------
.........................................................................................................................................................................................................ATGGCGGACTACCTGATCAGCGG..........................2320.500.50-------------------------------------------------------------------------0.50------------
........................................................................................................................................................................TGTTTATGTCGGGTCGCGG...............................................................1920.500.50-0.50------------------------------------------------------------------------------------
.......................................................................................................................................................................GTGTTTATGTCGGGTCG..................................................................1720.500.50----------------------------------------------------------------------0.50---------------
.........................................................................................................................................................................................................ATGGCGGACTACCTGATCAGCG...........................2220.500.50----------------------------------------------------------------------------0.50---------
..................................................................................................................................................................................................CGGCAGCATGGCGGACTACCTGA.................................2320.500.50-------------------0.50------------------------------------------------------------------
............................................................................................................................GTAGCAGCAGCAGCAGCG............................................................................................................1880.500.500.50-------------------------------------------------------------------------------------
...........................................................................................................................................................................TTATGTCGGGTCGCGGGG.............................................................1830.330.33---------------0.33----------------------------------------------------------------------
.........................................................................................................................................................................................................ATGGCGGACTACCTGAT................................1730.330.33-----------------------------------------------------------------------------0.33--------
........................................................................................................................................GCAGCGGCGGCAGCGGCGGGGGGG..........................................................................................2430.331.00-------0.33------------------------------------------------------------------------------
...........................................................................................................................................................................TTATGTCGGGTCGCGG...............................................................1630.330.33-0.33------------------------------------------------------------------------------------
........................................................................................................................................GCAGCGGCGGCAGCGGCGGGGGG...........................................................................................2330.331.00--0.33-----------------------------------------------------------------------------------
..........................................................................................................................CAGTAGCAGCAGCAGCAGCGG...........................................................................................................2130.330.33------------0.33-------------------------------------------------------------------------
.........................................................................................................................................................................GTTTATGTCGGGTCGCGGGG.............................................................2030.330.33------0.33-------------------------------------------------------------------------------
............................................................................................................................GTAGCAGCAGCAGCAGCGGC..........................................................................................................2040.250.250.25-------------------------------------------------------------------------------------
...........................................................................................................................................GCGGCGGCAGCGGCGGGC.............................................................................................1840.250.25--------------------------------------------------------------------------------0.25-----
................................................................................................................................................................................................................ACTACCTGATCAGCG...........................1540.250.25---------------------------------------------------------------------------------0.25----
...................................................................................................GCGTGGCCGCGGCGC........................................................................................................................................1550.200.20----------------------------------------------------------------------------------0.20---
...............................................................................................................................GCAGCAGCAGCAGCGGCGGCAGC....................................................................................................2350.200.20----------------------------------------------------------------------0.20---------------
............................................................................................................................GTAGCAGCAGCAGCAGCGG...........................................................................................................1950.200.20------------------------------------------------------------------------------------0.20-
..............................CGCCCTGGCCCGCCC.............................................................................................................................................................................................................1580.120.12-------------------------------------------------------------------------------------0.12
....................................................................................................................................................GCGGCGGGCGGCCGCG......................................................................................1690.110.11--------0.11-----------------------------------------------------------------------------

Antisense strand
AAGGGCGGGAGGGGCGGGAGGACAGGGCGGCGCCCTGGCCCGCCCTGCCGCTGCCGCAGCCCCCGCCCCCGCCCCCGGCCCGCCCGGCCCGCGGCAGCAGCGTGGCCGCGGCGCGGCGTCAGCAGTAGCAGCAGCAGCAGCGGCGGCAGCGGCGGGCGGCCGCGCGGGTGTTTATGTCGGGTCGCGGGGTCTCGCGGCAGCATGGCGGACTACCTGATCAGCGGCGGCACCGGCTACGTGCCCGAGGATG
....................................................................................................................((((.((.((.((.((.((....)).)).)).)).)).))))............................................................................................
................................................................................................................113............................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................GCGGCGGGCGGCCGCGG..................................................................................... 173.000.00--------1.00-1.00-----------------------------------------------------1.00---------------------
................................CAGCGGCAGGGCGGGCCAGGG..................................................................................................................................................................................................... 2112.002.00---------------2.00----------------------------------------------------------------------
.........................................................................CCCGGCCCGCCCGGCCCAAAT............................................................................................................................................................ 211.000.00-----------------------------------------------------------------1.00--------------------
............................................................................GGCCCGCCCGGCCCGCGG............................................................................................................................................................ 181.000.00--------1.00-----------------------------------------------------------------------------
..................................................................................CCCGGCCCGCGGCAGCGAG..................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00-------------------
..........................................................................................................................CTGCTGCTGCTGCTACTG.............................................................................................................. 1801.001.00----------------------------------1.00---------------------------------------------------
..........................................CCCTGCCGCTGCCGCGGGG............................................................................................................................................................................................. 191.000.001.00-------------------------------------------------------------------------------------
...............................................................CGCCCCCGCCCCCGGCAGGC....................................................................................................................................................................... 201.000.00----------------------------------------------1.00---------------------------------------
.........................................GCCCTGCCGCTGCCGCCG............................................................................................................................................................................................... 181.000.001.00-------------------------------------------------------------------------------------
...................................................................CCCGCCCCCGGCCCGCCCAT................................................................................................................................................................... 201.000.00--------------------------------------------------------------1.00-----------------------
..................................................CTGCCGCAGCCCCCGGTT...................................................................................................................................................................................... 181.000.00-----------------------1.00--------------------------------------------------------------
.............................................................CCCGCCCCCGCCCCCGGAGCC........................................................................................................................................................................ 211.000.00------------------------------------------------------1.00-------------------------------
....................................................................................................................................................GCGGCGGGCGGCCGCGGGG................................................................................... 1991.000.00--------------1.00-----------------------------------------------------------------------
...................GGACAGGGCGGCGCCACCC.................................................................................................................................................................................................................... 191.000.00---------------------------------------------------1.00----------------------------------
.................................................................CCCCCGCCCCCGGCCCAGGT..................................................................................................................................................................... 201.000.00-1.00------------------------------------------------------------------------------------
.....................................................................................................................................................CGGCGGGCGGCCGCGCGG................................................................................... 181.000.00--------1.00-----------------------------------------------------------------------------
.................................................................................CTGCTGCCGCGGGCCGGGC...................................................................................................................................................... 1920.500.50-----------------------------------------------------------------------0.50--------------
.....................................................................................................................................................................ACCCCGCGACCCGACATAAACACCC............................................................ 2520.500.50-0.50------------------------------------------------------------------------------------
...............................................GGGGCTGCGGCAGCGG........................................................................................................................................................................................... 1650.200.20-----------------------------------------------------------------------------------0.20--