ID: uc003vkg.3_intron_17_0_chr7_122131475_r.3p
GENE: (5)
chr7:122131425-122131674-


(2)
BRAIN 		(9)
BREAST 		(6)
CELL-LINE 		(2)
HEART 		(1)
KIDNEY 		(1)
LIVER 		(2)
OTHER 		(8)
SKIN 		(1)
TESTES

Sense strand
GAAGACCCAACAAATGCAAGCTGACAAACGAAAGGTGCTTGAATCTCTGAGCTAGGTTTTGAAAAATGCTAAAATTTAATAATTTATGTGCAAATTATGTTATATTTTTAATTGGGAAAAGAGTATTTTGATAAAAAAACGAAAGTTAAATTTGGTAAATTTAATGTGACTAATCTGTAAACTTTTTTTTTCTCGAGCAGGTTAGCCAATATACCTTTGCTATGTGCAGTTATAGAGAAAAGAAGTCTGA
...............................................................................................................((((((((((((...((((.......(((....)))....(((((............)))))....))))...))))))))))))......................................................
...............................................................................................................112.....................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR343336SRR343337
...........................................................................................................................................................................AATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................29117.0017.001.002.001.00-1.001.00-1.00-2.00-2.002.001.00----1.00------1.00--1.00-------
..........................................................................................................................................................................TAATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................3018.008.001.002.002.00------------1.00-----1.00-----1.00--------
.....................................................................................................................................................................GTGACTAATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................3517.007.001.00----1.00--2.00-----1.00-1.00------1.00------------
....................................................................................................................................................................TGTGACTAATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................3616.006.002.00---1.001.00----2.00-------------------------
.........................................................................................................................................................................CTAATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................3112.002.00--1.00-------------------1.00-------------
.........................................................................................................................................................................................TTTTTTCTCGAGCAG..................................................1521.501.50------------------------------0.500.50-0.50--
....................................................................................................................................................................................ACTTTTTTTTTCTCGGG.....................................................171.000.00---1.00--------------------------------
....................................................................................................................................................................................ACTTTTTTTTTCTCGGTGG...................................................191.000.00---1.00--------------------------------
....................................................................................................................................................................TGTGACTAATCTGTAAACTTTTTTTTTCTCGATCAG..................................................361.000.001.00-----------------------------------
........................................................................................................................................................................ACTAATCTGTAAACTTTTTTTTTCTCGAGCAG..................................................3211.001.00-1.00----------------------------------
....................................................................................................................AAAAGAGTATTTTGATAGA...................................................................................................................191.000.00------------------------1.00-----------
....................................................................................................................................................................TGTGACTAATCTGTAAACTTTTTTTTTCTCGAGCA...................................................3511.001.00----1.00-------------------------------
...........................................................................................................................................................................AATCTGTAAACTTTTTTTTTCTCGAGCAT..................................................291.000.00-------1.00----------------------------
...............................AAGGTGCTTGAATCTCTGAGCTAGGTTTG..............................................................................................................................................................................................291.000.00--------------------1.00---------------
.....................................................................................................................................................................GTGACTAATCTGTAAACTTTTTTTTTCTCGATCAG..................................................351.000.001.00-----------------------------------
...........................................................................................................................................................................AATCTGTAAACTTTTTTTTTCTCG.......................................................2411.001.00-----------------1.00------------------
.........................................................................................................................................................................................TTTTTTCTCGAGCAGCGGT..............................................1920.501.50--------------------------------0.50---
.........................................................................................................................................AACGAAAGTTAAATT..................................................................................................1550.400.40----------------------------------0.200.20

Antisense strand
GAAGACCCAACAAATGCAAGCTGACAAACGAAAGGTGCTTGAATCTCTGAGCTAGGTTTTGAAAAATGCTAAAATTTAATAATTTATGTGCAAATTATGTTATATTTTTAATTGGGAAAAGAGTATTTTGATAAAAAAACGAAAGTTAAATTTGGTAAATTTAATGTGACTAATCTGTAAACTTTTTTTTTCTCGAGCAGGTTAGCCAATATACCTTTGCTATGTGCAGTTATAGAGAAAAGAAGTCTGA
...............................................................................................................((((((((((((...((((.......(((....)))....(((((............)))))....))))...))))))))))))......................................................
...............................................................................................................112.....................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR343336SRR343337
....................................................................................................................................AAAAAAACGAAAGTTCTTT................................................................................................... 192.000.00---2.00--------------------------------
.......................................................................................................................................AAAACGAAAGTTAAAAAG................................................................................................. 182.000.00------2.00-----------------------------
......................................................................................................................AAGAGTATTTTGATAAAT.................................................................................................................. 181.000.00-----------------------------1.00------
................................................................................................................................................................................................................ATATACCTTTGCTATGTA........................ 181.000.00--------------------------1.00---------
.......................................................................................GTGCAAATTATGTTATTTG................................................................................................................................................ 191.000.00-------------------1.00----------------