ID: uc003vbo.2_intron_8_0_chr7_102963080_r
GENE: (8)
chr7:102963030-102963199-


(5)
B-CELL 		(1)
BRAIN 		(11)
BREAST 		(27)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(4)
HEART 		(12)
HELA 		(3)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
AAGAGCACAAAGAAAAAAAGAAGAAATGAACAGAATAAGAACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAGACAATGCATACAGCTGTGATCCAAGGATAAAAAAGTTCAAGGAAGAAGAA
..................................................(((((.((((..(((....)))........(((((...(((.....))).)))))...))))))))).....................................................
..................................................51...................................................................120................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532878(GSM532878)
G691T. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAG..................................................701328.00328.00166.00149.00---3.00-5.005.00-----------------------------------------------------------------------------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTAG..................................................25132.0032.00---18.00-----------1.00-1.00-----1.00---------1.00----2.00---------------1.00-1.00---1.00--------1.00-1.001.00-----1.001.00------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTAGA.................................................26122.0022.00--4.00-4.00-------1.00---3.002.001.002.00----1.00------------1.00--------------1.00---------------------1.001.00----------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTG......................................................66117.0017.008.009.00------------------------------------------------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTAG..................................................24116.0016.00--3.00-------------------2.001.00----2.001.00-1.00--2.00------------------------1.00-----1.00---------------1.00---1.00------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGT.....................................................67113.0017.00-13.00------------------------------------------------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTAGA.................................................25111.0011.00--8.00---------------1.00----------------------------1.00----------------------------------1.00---------
...................................................TAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGC.....................................................6619.009.00-9.00------------------------------------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTA...................................................6918.008.002.006.00------------------------------------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGTA....................................................6817.0017.007.00-------------------------------------------------------------------------------------------
........................................ACATTAGTTGGTAAGTAGAATTG...........................................................................................................2316.006.00----5.00--------------------------------------------1.00------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAGG.................................................7116.00328.006.00-------------------------------------------------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTAGG.................................................2516.0016.00--1.00-5.00---------------------------------------------------------------------------------------
...........................................................ATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAG..................................................6115.005.00-5.00------------------------------------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGA.....................................................6715.0017.005.00-------------------------------------------------------------------------------------------
...................................................................................................ATTAACTTTTTCTTTTGCTAGA.................................................2214.004.00--------------3.00--------------------------------------------------------------------1.00--------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGA....................................................................................3614.004.00-------------3.00----------------------------------------------------------------------1.00-------
.............................................................................................................................GCATACAGCTGTGATCCAAGGATA.....................2413.003.00--3.00-----------------------------------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCT..............................................................................................2613.003.00------------2.00------------------------------------------------------------1.00------------------
..............................................................GATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAGACA...............................................6113.003.00-----3.00--------------------------------------------------------------------------------------
....................................................................................................TTAACTTTTTCTTTTGCTAG..................................................2013.003.00----------2.00-------------------1.00-------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGT...................................................................................................2112.002.00--------------------------1.00-----1.00-----------------------------------------------------------
.........................ATGAACAGAATAAGAACATTAGT..........................................................................................................................2312.002.00------2.00-------------------------------------------------------------------------------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTAGAT................................................2712.0022.00---------------------------------------2.00----------------------------------------------------
....................................................................................................TTAACTTTTTCTTTTGCTAGA.................................................2112.002.00--1.00----------------1.00------------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATGAATA..........................................................................................................................................242.000.00---------------------------2.00----------------------------------------------------------------
.............................................................TGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAG..................................................5912.002.00-------1.001.00-----------------------------------------------------------------------------------
.....................................AGAACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAGACAATGCATACAGA....................................972.000.002.00-------------------------------------------------------------------------------------------
..............................................................................ATGTTAGAAATTCAAAATGAGATTAA..................................................................2611.001.00------1.00-------------------------------------------------------------------------------------
........................................................................................TTCAAAATGAGATTAACTTTTTCTTT........................................................2611.001.00------------1.00-------------------------------------------------------------------------------
..................AGAAGAAATGAACAGATCCC....................................................................................................................................201.000.00----------------------------------------1.00---------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTATA.................................................251.000.00------------------------1.00-------------------------------------------------------------------
.............................................................................................................................GCATACAGCTGTGATCCAAGGAT......................2311.001.00-----------------------------------1.00--------------------------------------------------------
.......................................AACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGA......................................................................6111.001.00-------1.00------------------------------------------------------------------------------------
............................................................................................................................TGCATACAGCTGTGATCCAAGGAT......................2411.001.00--------------------------------------------------------------------------------1.00-----------
................................................................................................GAGATTAACTTTTTCTTTTGCTAGT.................................................2511.0016.00----------------------------------------------------------1.00---------------------------------
.............................................................................................................................GCATACAGCTGTGATCCAAGGATAA....................2511.001.00------1.00-------------------------------------------------------------------------------------
.................................................................................................................................ACAGCTGTGATCCAAGGATAAAAAA................2511.001.00------------------------------1.00-------------------------------------------------------------
............................AACAGAATAAGAACATTAGTTGGTAAGTAGAATTGATA........................................................................................................381.000.00-1.00------------------------------------------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTT.......................................................................................3311.001.00-------------------------------------------------------1.00------------------------------------
..................................................GTAAGTAGAATTGATTTA......................................................................................................1811.001.00----------------------------------------------------------------------------1.00---------------
.............................................................................................AATGAGATTAACTTTTTCTTTTGCTAG..................................................2711.001.00------------------------------------1.00-------------------------------------------------------
........................................ACATTAGTTGGTAAGTAGAATTGATT........................................................................................................2611.001.00--------------------------------------------------------------------1.00-----------------------
.....................AGAAATGAACAGAATAAGAACATTA............................................................................................................................2511.001.00------1.00-------------------------------------------------------------------------------------
.................................................................................................AGATTAACTTTTTCTTTTGCTAGA.................................................2411.001.00--------------------------------------------------------------------------------------1.00-----
...................................................................................................ATTAACTTTTTCTTTTGCTATA.................................................221.000.00---------------------------------------------------------------1.00----------------------------
...............................................................................................................TTTTGCTAGACAATGCATACAGA....................................231.000.00---------------------------------1.00----------------------------------------------------------
..................................................GTAAGTAGAATTGATTAA......................................................................................................181.000.00--------------------------------1.00-----------------------------------------------------------
..................................................GTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTT..............................................................5811.001.00-1.00------------------------------------------------------------------------------------------
.........................ATGAACAGAATAAGAACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGT........................................................................................5711.001.00-----1.00--------------------------------------------------------------------------------------
...................................................TAAGTAGAATTGATTTAAGTCCCCTAAATGTTA......................................................................................3311.001.00-------------------------------------------------------------------1.00------------------------
.............AAAAAAGAAGAAATGAACAGAATAA....................................................................................................................................2511.001.00------1.00-------------------------------------------------------------------------------------
.......................................AACATTAGTTGGTAAGTAGAATTGATTTAAGTCC.................................................................................................3411.001.00-------------------------1.00------------------------------------------------------------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTAGAA................................................2711.0022.00----------1.00---------------------------------------------------------------------------------
......................................GAACATTAGTTGGTAAGTAGAAT.............................................................................................................2311.001.00-------------------------------------------1.00------------------------------------------------
..................AGAAGAAATGAACAGAATAAG...................................................................................................................................2111.001.00----1.00---------------------------------------------------------------------------------------
...................................................................................................ATTAACTTTTTCTTTTGCTAG..................................................2111.001.00-------------------------------1.00------------------------------------------------------------
..............................................................................................ATGAGATTAACTTTTTCTTTTGCTAGA.................................................2711.001.00------------------------------------------1.00-------------------------------------------------
....................................................................................................................................GCTGTGATCCAAGGATAAAAAAGT..............2411.001.00----------------------------------------------------------------------1.00---------------------
...................................TAAGAACATTAGTTGGTAAGTAGAATT............................................................................................................2711.001.00----1.00---------------------------------------------------------------------------------------
....................................................................................................TTAACTTTTTCTTTTGCTAGAA................................................2211.002.00-----------------------------------------------------------------------------1.00--------------
...................................TAAGAACATTAGTTGGTAAGTAGAATTTTG.........................................................................................................3011.001.00---------------------------------------------------------1.00----------------------------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTAGAG................................................2711.0022.00--1.00-----------------------------------------------------------------------------------------
.................................................................................................................................ACAGCTGTGATCCAAGGAT......................1911.001.00-----------------------------------1.00--------------------------------------------------------
.........AAGAAAAAAAGAAGAAATGAACA..........................................................................................................................................2311.001.00----------------------------------------------1.00---------------------------------------------
......................GAAATGAACAGAATAAGAAC................................................................................................................................2011.001.00----------1.00---------------------------------------------------------------------------------
............................................................................................................................TGCATACAGCTGTGATCCAAGG........................2211.001.00--------------------------------------------------1.00-----------------------------------------
............................................................TTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAG..................................................6011.001.00-----------------------------------------------------1.00--------------------------------------
............................................................................................................................TGCATACAGCTGTGATCCAAGGA.......................2311.001.00---------------------------------------------------------------------------------------1.00----
................................................TGGTAAGTAGAATTGATT........................................................................................................1811.001.00------------------------------------------------------------------1.00-------------------------
...AGCACAAAGAAAAAAAGAAGAAAGAAC............................................................................................................................................271.000.00-------------------------------------1.00------------------------------------------------------
........AAAGAAAAAAAGAAGAAATGAACAGA........................................................................................................................................2611.001.00------1.00-------------------------------------------------------------------------------------
..................................................................................................GATTAACTTTTTCTTTTGCTAGA.................................................2311.001.00----------1.00---------------------------------------------------------------------------------
..........................................................AATTGATTTAAGTCCCCTAAAT..........................................................................................2211.001.00------------------------------------------------1.00-------------------------------------------
......................GAAATGAACAGAATAAGAACATTA............................................................................................................................2411.001.00---------------1.00----------------------------------------------------------------------------
........................................ACATTAGTTGGTAAGTAGAATTGATTT.......................................................................................................2711.001.00--1.00-----------------------------------------------------------------------------------------
...................................TAAGAACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGA........................................................................6311.001.00-----1.00--------------------------------------------------------------------------------------
............................AACAGAATAAGAACATTAGTTG........................................................................................................................2211.001.00--------------------------1.00-----------------------------------------------------------------
.....................................................................................................................................................AAAAAGTTCAAGGAAGAAGAA2111.001.00----------------------------------------------------------------------------------------1.00---
................................................................................................GAGATTAACTTTTTCTTTTGCTAT..................................................241.000.00-----------------------------1.00--------------------------------------------------------------
...............................................................................................TGAGATTAACTTTTTCTTTTGCTA...................................................2411.001.00------------------1.00-------------------------------------------------------------------------
..............................................................................................ATGAGATTAACTTTTTCTTTTGCTAG..................................................2611.001.00-------------------------1.00------------------------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTAGAA................................................2611.0011.00-------------------------------------------------------------1.00------------------------------
...............AAAAGAAGAAATGAACAGAATAAGAAC................................................................................................................................2711.001.00---------------1.00----------------------------------------------------------------------------
................................................................................................GAGATTAACTTTTTCTTTTGCTAGAC................................................2611.001.00---------------------------------------------------1.00----------------------------------------
.....................................................................................................TAACTTTTTCTTTTGCTAGA.................................................2030.670.67--0.33---------------------------------------------------------------------------------------0.33-
.................................AATAAGAACATTAGTTG........................................................................................................................1720.500.50-----------------------------------------------------------------------------------------0.50--
...........................GAACAGAATAAGAACATT.............................................................................................................................1820.500.50----------------------------------------0.50---------------------------------------------------

Antisense strand
AAGAGCACAAAGAAAAAAAGAAGAAATGAACAGAATAAGAACATTAGTTGGTAAGTAGAATTGATTTAAGTCCCCTAAATGTTAGAAATTCAAAATGAGATTAACTTTTTCTTTTGCTAGACAATGCATACAGCTGTGATCCAAGGATAAAAAAGTTCAAGGAAGAAGAA
..................................................(((((.((((..(((....)))........(((((...(((.....))).)))))...))))))))).....................................................
..................................................51...................................................................120................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532878(GSM532878)
G691T. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
........................................................................................................................................GAACTTTTTTATCCTTGGATCA............ 2211.001.00--------------------------------------------1.00-----------------------------------------------
........AAAGAAAAAAAGAAGAAATTAAG........................................................................................................................................... 231.000.00---------1.00----------------------------------------------------------------------------------
.....GTTCATTTCTTCTTTTTTTCTTTGTG........................................................................................................................................... 2611.001.00----------------------------------------------------------------1.00---------------------------
.AGAGCACAAAGAAAAAACG...................................................................................................................................................... 191.000.00------------------------------------1.00-------------------------------------------------------
.......CAAAGAAAAAAAGAAGAGC................................................................................................................................................ 191.000.00---------1.00----------------------------------------------------------------------------------
.......CAAAGAAAAAAAGAAGAGCTT.............................................................................................................................................. 211.000.00---------1.00----------------------------------------------------------------------------------
.....CTGTTCATTTCTTCTTTTTTTCTTTGTG......................................................................................................................................... 2811.001.00-----------------------------------------1.00--------------------------------------------------
.....TGTTCATTTCTTCTTTTTTTCTTTGTG.......................................................................................................................................... 2711.001.00---------------------------------------------1.00----------------------------------------------
..............................................................................................................................................AAGGATAAAAAAGTTACCA......... 191.000.00---------------------1.00----------------------------------------------------------------------
..................AGAAGAAATGAACAGAATTT.................................................................................................................................... 201.000.00--------------------------------------------------------------1.00-----------------------------
........AAAGAAAAAAAGAAGAAATTTTC........................................................................................................................................... 231.000.00---------1.00----------------------------------------------------------------------------------
..........AGAAAAAAAGAAGAAAACGG............................................................................................................................................ 201.000.00---------------------1.00----------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATTTTG........................................................................................................................................... 231.000.00-----------1.00--------------------------------------------------------------------------------
....GCACAAAGAAAAAAAGC..................................................................................................................................................... 171.000.00---------1.00----------------------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATTTAG........................................................................................................................................... 231.000.00--------------------1.00-----------------------------------------------------------------------
............AAAAAAAGAAGAAATGAACTTAT....................................................................................................................................... 231.000.00-----------1.00--------------------------------------------------------------------------------
..........AGAAAAAAAGAAGAAATGAG............................................................................................................................................ 201.000.00--------------------1.00-----------------------------------------------------------------------
..............AAAAAGAAGAAATGAAGGC......................................................................................................................................... 191.000.00---------1.00----------------------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATGATTTG......................................................................................................................................... 251.000.00-----------1.00--------------------------------------------------------------------------------
.......CATTTCTTCTTTTTTTCTTTG.............................................................................................................................................. 2120.500.50-----------0.50--------------------------------------------------------------------------------
........CATTTCTTCTTTTTTTCTTT.............................................................................................................................................. 2050.200.20-----------0.20--------------------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATGCTAG.......................................................................................................................................... 240.200.00-----------0.20--------------------------------------------------------------------------------
.........CATTTCTTCTTTTTTTCTT.............................................................................................................................................. 1950.200.20---------------------0.20----------------------------------------------------------------------
.........AAGAAAAAAAGAAGAAATGG............................................................................................................................................. 200.200.00-----------0.20--------------------------------------------------------------------------------
........AAAGAAAAAAAGAAGAAATGTTG........................................................................................................................................... 230.200.00--------------------0.20-----------------------------------------------------------------------
.................TCTGTTCATTTCTTCTT........................................................................................................................................ 1780.120.12-------------------------------------------------------------------------------------------0.12