ID: uc003uwh.3_intron_0_0_chr7_100303928_f.5p
GENE: (1)
chr7:100303878-100304127+


(2)
AGO2.ip
(12)
B-CELL
(5)
BRAIN
(22)
BREAST
(24)
CELL-LINE
(16)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(65)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGGCGGGGAGCGGGCCTCGCGCGCCTGGAGGGCCCTGTGGAACGAAGAGAGTAAGCACGGGAGGGGCGGCGGAGGGGCGCGAGTTTGAGGGCGACGCGATGAATGAATCGGAACGGGGGGTGGGGAGACGCGGGATCTGGAGGTGAGTGGGAGAGGACGAGGGGCCGGAAGGAAACAGGGACATCGAGTGTGTCCCTTCTCGGGTGCACCCTTTATTTTTGTTTTTGTTTTTGTTTGAGACAGAGGCTTG
...............................................................((((.(((......)))..))))....((.((.(((((.((..(((....((((..(((......)))....))))..)))..))................((....)).........))))).))))...........................................................
..........................................................59..................................................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM532886(GSM532886)
G850T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532890(GSM532890)
G576T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR189784SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040043(GSM532928)
G428T. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
...............................................................GGGCGGCGGAGGGGCCGC.........................................................................................................................................................................18481.000.00207.0037.007.005.0019.008.0013.007.0013.008.006.009.00-3.00-5.00-6.00-7.006.002.005.002.006.005.00-3.004.002.00-1.00--2.001.004.003.004.00-2.001.001.00--2.002.00-3.004.003.003.003.001.00-2.003.003.00---2.001.003.00-1.00--1.00---1.001.001.001.001.001.00-1.002.00-1.00-1.002.001.00----1.001.00---------1.00-1.00-1.00---1.00-1.00--1.001.00------------1.00------1.00-------1.001.00-----1.00-1.001.00----
...............................................................GGGCGGCGGAGGGGCCGCG........................................................................................................................................................................19447.000.00177.0018.0035.0031.0015.0018.004.006.001.007.004.003.0011.006.00-4.00-2.00-1.001.001.00-2.00-1.00-2.00-2.004.003.005.005.003.002.00----2.003.001.00-3.001.002.003.00-----2.003.00---3.00-2.001.001.00-2.001.002.00-1.00-1.00--1.001.00-1.001.002.001.00-2.001.00---1.00------1.00-1.001.001.00--1.00-------1.001.00----1.00--1.001.00-1.001.001.00-1.001.00--1.00-1.001.00-1.001.00--1.001.001.00---1.00----1.001.00--1.00--1.00---
...............................................................GGGCGGCGGAGGGGCCGCC........................................................................................................................................................................1913.000.0010.00-2.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGA.........................................................................................................................................................................1812.000.007.001.001.00-2.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGCA........................................................................................................................................................................1911.000.006.00--2.00----------------------------------------1.00--1.00----------------1.00----------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGAG........................................................................................................................................................................199.000.009.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................GCCCTGTGGAACGAAGAGAG.......................................................................................................................................................................................................2019.009.00----------------9.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGCT........................................................................................................................................................................195.000.004.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCCCG........................................................................................................................................................................195.000.003.00-1.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGT.........................................................................................................................................................................185.000.004.00----------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
...............................................................GGGCGGCGGAGGGGCCCC.........................................................................................................................................................................184.000.002.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGTG........................................................................................................................................................................194.000.003.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCTCG........................................................................................................................................................................193.000.002.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCT..........................................................................................................................................................................173.000.001.00-----1.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................ATTTTTGTTTTTGTTTTTGTTTCGAG..........263.000.00--------------2.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CGGCGGAGGGGCGCGCCGG.....................................................................................................................................................................193.000.00---------------2.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGGGA..........................................................................................................................................................................1803.001.00-2.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCTC.........................................................................................................................................................................182.000.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................TGTGGAACGAAGAGAGGCAC...................................................................................................................................................................................................202.000.00------------------------------------------------------------1.00--------------------------------------------1.00-----------------------------------------------------
................................................................GGCGGCGGAGGGGCGCC.........................................................................................................................................................................172.000.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGAC........................................................................................................................................................................192.000.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
................................CCCTGTGGAACGAAGAGAGG......................................................................................................................................................................................................2012.002.00------------------------------------------2.00--------------------------------------------------------------------------------------------------------------------
................................CCCTGTGGAACGAAGAGA........................................................................................................................................................................................................1812.002.00--------2.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TTTTGTTTTTGTTTTTGTTCCAG...........232.000.00--------------1.00------------------------------------------------------------------------1.00-----------------------------------------------------------------------
..................................CTGTGGAACGAAGAGAGGCA....................................................................................................................................................................................................202.000.00---------------------------------------------------------------------------------------------------------------------------1.00-----------1.00-----------------------
.........................................................................................................................................................................AGGAAACAGGGACATCGA...............................................................1812.002.00---------------------------------------1.00-------------------------------------------------------------------1.00---------------------------------------------------
...................................TGTGGAACGAAGAGAGTAAGCA.................................................................................................................................................................................................2212.002.00-------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................CTGTGGAACGAAGAGAGT......................................................................................................................................................................................................1812.002.00---------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTTTTGTTTTTGTTTTTGTTCGA............232.000.00--------------2.00------------------------------------------------------------------------------------------------------------------------------------------------
................................CCCTGTGGAACGAAGAGAG.......................................................................................................................................................................................................1912.002.00-----------------------------------------------------------2.00---------------------------------------------------------------------------------------------------
..........................GGAGGGCCCTGTGGAAC...............................................................................................................................................................................................................1711.001.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................CCGGAAGGAAACAGGGAC....................................................................1811.001.00---------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................AACAGGGACATCGAGTGTGT.........................................................2011.001.00--------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
..................................................................CGGCGGAGGGGCGCGGGCC.....................................................................................................................................................................191.000.00-------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TTTTGTTTTTGTTTTTGTTCTCG...........231.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTTTTGTTTTTGTTTTTGTTATC............231.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TATTTTTGTTTTTGTTTTTGTTTCGAG..........271.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................TGTGGAACGAAGAGAGGCA....................................................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..........CGGGCCTCGCGCGCCTGGA.............................................................................................................................................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................ACGGGAGGGGCGGCGGAGGGGCG...........................................................................................................................................................................2311.001.00------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTTTTGTTTTTGTTTTTGTTCCTT...........241.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TTTTGTTTTTGTTTTTGTTCGG............221.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGAATCGGAACGGGG....................................................................................................................................1511.001.00----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................TGTGGAACGAAGAGAGTAA....................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.................................CCTGTGGAACGAAGAGA........................................................................................................................................................................................................1721.001.00-----------------------------------------------------------------------------------------0.50------------------------------------------------------------------0.50--
...............................................................GGGCGGCGGAGGGGCCTA.........................................................................................................................................................................181.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GGGGCGCGAGTTTGAATGT..............................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
...............CTCGCGCGCCTGGAGGGCC........................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGACG..........................................................................................................................................................................1801.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGAGTGGGAGAGGACGCGG........................................................................................191.000.00------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGG.............................................................................................................................................................................1501.001.00-----------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..............................................................................................................GAACGGGGGGTGGGGC............................................................................................................................161.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TTTTGTTTTTGTTTTTGTTCGAG...........231.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...............................GCCCTGTGGAACGAAGAGA........................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGGA........................................................................................................................................................................191.000.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................ATTTTTGTTTTTGTTTTTGTGGGC............241.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................GATGAATGAATCGGAACGGGGGG..................................................................................................................................2311.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
...........................................................GGAGGGGCGGCGGAGGGCCC...........................................................................................................................................................................201.000.00----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................GCGATGAATGAATCGGAACGGGG....................................................................................................................................2311.001.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................GTTTTTGTTTGAGACAGAGAG...211.000.00-----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCCGGAAGGAAACAGGGAC....................................................................1911.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..........CGGGCCTCGCGCGCCGCG..............................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
........................................................................................................GAATCGGAACGGGGGGCT................................................................................................................................181.000.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------
.....................................................................CGGAGGGGCGCGAGTTTGA..................................................................................................................................................................1911.001.00------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................AATCGGAACGGGGGGCTA...............................................................................................................................181.000.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................GCGGCGGAGGGGCGCGCCGG.....................................................................................................................................................................201.000.00--------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGACGC.........................................................................................................................................................................1901.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTTTTGTTTTTGTTTTTGTTCCCC...........241.000.00---------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
.........................................................................................................................GGGGAGACGCGGGATCTGG..............................................................................................................1911.001.00-------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
................................................................GGCGGCGGAGGGGCGATA........................................................................................................................................................................181.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TTATTTTTGTTTTTGTTTTTGTTTCTG...........271.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGATCTGGAGGTGATGA.....................................................................................................191.000.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGGGC..........................................................................................................................................................................1801.001.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................GCGGCGGAGGGGCGCGGGCC.....................................................................................................................................................................201.000.00------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..................................................................CGGCGGAGGGGCGCGCA.......................................................................................................................................................................171.000.00-------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCGAAG........................................................................................................................................................................1941.000.50------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
................................................................GGCGGCGGAGGGGCGCGCCGG.....................................................................................................................................................................211.000.00-----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TTTTTGTTTGAGACAGAGGCTT.2211.001.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................AGCACGGGAGGGGCGGCGGACC...............................................................................................................................................................................221.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGATCTGGAGGTGAGTGAAA..................................................................................................221.000.00--------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..............................................................GGGGCGGCGGAGGGGCCGCG........................................................................................................................................................................2091.000.670.89-------------------------------------------------------------------------------------------0.11------------------------------------------------------------------
........................................................ACGGGAGGGGCGGCGCGC................................................................................................................................................................................181.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................AGGGGCGGCGGAGGGGCCGTG........................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
........................................................................................................GAATCGGAACGGGGGCT.................................................................................................................................171.000.00---------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
................................................................GGCGGCGGAGGGGCGCCTG.......................................................................................................................................................................191.000.00-------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTTTTGTTTTTGTTTTTGTTCTCG...........241.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.................................CCTGTGGAACGAAGAGAGGCA....................................................................................................................................................................................................211.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TTATTTTTGTTTTTGTTTTTGTTTGCCC..........281.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................AGGGCCCTGTGGAACGGC............................................................................................................................................................................................................181.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCCGTT........................................................................................................................................................................191.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................ATTTTTGTTTTTGTTTTTGTTCTGG...........251.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGGGT..........................................................................................................................................................................1801.001.00------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TGAATCGGAACGGGGTA..................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
........................................................ACGGGAGGGGCGGCGCC.................................................................................................................................................................................171.000.00-----------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGC............................................................................................................................................................................1690.670.67-0.11----0.22---------------------------------------------------------------------------------0.11---------------------------------------------------------------------0.22
..............................................................GGGGCGGCGGAGGGGCCGC.........................................................................................................................................................................1990.560.670.220.110.22------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGCGGAGGGGCG...........................................................................................................................................................................1640.500.50----------------------------------------------------------------------------------------0.25-0.25--------------------------------------------------------------------
...................................TGTGGAACGAAGAGA........................................................................................................................................................................................................1530.330.33-------------------------------------------------------------------------------------------------------------------------------------------------------------0.33-
..............................................................GGGGCGGCGGAGGGGCG...........................................................................................................................................................................1730.330.33----------0.33----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GTTTGAGACAGAGGCTTG1860.170.17------------------------------------------------------------------0.17--------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGCCCCC........................................................................................................................................................................2090.110.670.11--------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCGGCGGAGGGGCAGC.........................................................................................................................................................................1990.110.670.11--------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGGCGGGGAGCGGGCCTCGCGCGCCTGGAGGGCCCTGTGGAACGAAGAGAGTAAGCACGGGAGGGGCGGCGGAGGGGCGCGAGTTTGAGGGCGACGCGATGAATGAATCGGAACGGGGGGTGGGGAGACGCGGGATCTGGAGGTGAGTGGGAGAGGACGAGGGGCCGGAAGGAAACAGGGACATCGAGTGTGTCCCTTCTCGGGTGCACCCTTTATTTTTGTTTTTGTTTTTGTTTGAGACAGAGGCTTG
...............................................................((((.(((......)))..))))....((.((.(((((.((..(((....((((..(((......)))....))))..)))..))................((....)).........))))).))))...........................................................
..........................................................59..................................................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM532886(GSM532886)
G850T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532890(GSM532890)
G576T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR189784SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040043(GSM532928)
G428T. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
........................................................................................................................................................GAGGACGAGGGGCCGCC................................................................................. 1710.000.00--------------------------5.00--------------------------------------------2.00-----------------------------------------------1.00------------1.00-------------1.00------------
............................................................GAGGGGCGGCGGAGGGTCTC.......................................................................................................................................................................... 204.000.00-------------------------------------------4.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GAGGACGAGGGGCCGGCC................................................................................ 182.000.00-----0.33--------------------0.33-------------------------------------------------------------0.33---------1.00------------------------------------------------------------
............................................................................GTCGCCCTCAAACTCGCGC........................................................................................................................................................... 1911.001.00-----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
...................................................................................................................GGGGGTGGGGAGACGCGGGAGCCC............................................................................................................... 241.000.00----------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...................................................................GGCGGAGGGGCGCGAGTG..................................................................................................................................................................... 181.000.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
........................................................................................................................................................CCGGCCCCTCGTCCTC.................................................................................. 1630.330.33------0.33--------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGCCGCCCCTCCC................................................................................................................................................................................. 1560.170.17-----------------------------------------------------------------0.17---------------------------------------------------------------------------------------------
...........................................................CTCCGCCGCCCCTCC................................................................................................................................................................................ 1560.170.17---------------------------0.17-----------------------------------------------------------------------------------------------------------------------------------