ID: uc003ung.1_intron_0_0_chr7_94024414_f.3p
GENE: COL1A2(1)
chr7:94026860-94027109+


(1)
AGO2.ip
(1)
BRAIN
(2)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
OTHER
(3)
SKIN

Sense strand
ACAAATCACCCTGCTGATCCCTGCCATACTTTTGACCTGCATAATTTCTAGGTCATTAAAATATTCTTAAAAAAATATAATTGGTCCTTAATTAGGTAATTCAATTCTATAAACTTGTTTCTCTATTTGTTAATTATTGCTATTGATCCATGAAGTGATACTAATAATTGTTTCCTACTTTTTCTTTTTTTTTTCTACAGCTTTACAAGAGGTGAGTAAAACTTTTTTTAGAATTTTTAAAAATACTTTG
..............................................................................((((((.(((.....)))....))))))........................(((((((((.((((............)))).)))))))))................................................................................
...........................................................................76...............................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
......................................................................................................................................................................ATTGTTTCCTACTTTATGG.................................................................198.000.00-------3.002.002.00-----1.00-
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCTCCAG..................................................234.000.002.001.001.00--------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTTTTG....................................................263.000.002.00--1.00-------------
........................................................................................................................................................................TGTTTCCTACTTTTTGGA................................................................182.000.00-----------2.00-----
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTG..........................................................202.000.001.00-1.00--------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTTTACAG....................................................252.000.00----2.00------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTTTG.....................................................252.000.001.00--1.00-------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTAAT.......................................................221.000.00--1.00--------------
.....................................................................................................................................................................................TTCTTTTTTTTTTCTACCCAG................................................211.000.001.00----------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTCGAG..................................................241.000.00-1.00---------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTTTGC......................................................231.000.00-1.00---------------
................................................................................TTGGTCCTTAATTAGGAACA......................................................................................................................................................201.000.00-------------1.00---
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCACTT...................................................231.000.00-1.00---------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTCTATG...................................................211.000.00-1.00---------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTGTG...................................................231.000.00-----1.00-----------
...................................................................................................................................................................................TTTTCTTTTTTTTTTCTACCAG.................................................221.000.00--1.00--------------
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCTACTGGG................................................251.000.00-1.00---------------
..............................................................................................................................................................................CTACTTTTTCTTTTTTTTTTAT......................................................221.000.00---1.00-------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTTGGC..................................................241.000.00-1.00---------------
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCAACG...................................................221.000.00--1.00--------------
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCTCATG..................................................231.000.00---1.00-------------
..............................................................................................................................................................................CTACTTTTTCTTTTTTTTAATG......................................................221.000.00----1.00------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCCTGG...................................................231.000.00-----1.00-----------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTTTAG..................................................241.000.00-1.00---------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTTAAG....................................................261.000.001.00----------------
..................................................................................................................................................................................TTTTTCTTTTTTTTTTCTACAG..................................................2211.001.00--1.00--------------
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCTACCAC.................................................241.000.00-1.00---------------
......................................................................................................................................................................................TCTTTTTTTTTTCTACCTTG................................................201.000.001.00----------------
.....................................................................................................................................................................................TTCTTTTTTTTTTCTACCCTG................................................211.000.00------1.00----------
...............................................................................................................................................................................TACTTTTTCTTTTTTTTGCTG......................................................211.000.00-----1.00-----------
.....................................................................................................................................................................................TTCTTTTTTTTTTCTACTGTG................................................211.000.00-----1.00-----------
...............................................................................................................................................................................TACTTTTTCTTTTTTTTTTCTAAT...................................................241.000.00--1.00--------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCCTTG...................................................231.000.00-1.00---------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTTATG....................................................261.000.001.00----------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTCTATG...................................................201.000.00--1.00--------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTCTACATG.................................................221.000.00--1.00--------------
.....................................................................................................................................................................................TTCTTTTTTTTTTCTACTAGG................................................211.000.00-----1.00-----------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTATAG..................................................241.000.001.00----------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTACAG......................................................231.000.00--1.00--------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTTTCTTTTT..................................................271.000.00---1.00-------------
............................................................ATATTCTTAAAAAAATAATG..........................................................................................................................................................................201.000.00---1.00-------------
............................................................................................................................................................................TCCTACTTTTTCTTTTAGA...........................................................191.000.00---1.00-------------
.............................................................................................................................................................................CCTACTTTTTCTTTTCCCA..........................................................191.000.001.00----------------
...................................................................................................................................................................................TTTTCTTTTTTTTTTCTACACAAG...............................................241.000.001.00----------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTCG......................................................241.000.00----1.00------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTTGG...................................................231.000.00----1.00------------
.............CTGATCCCTGCCATAC.............................................................................................................................................................................................................................1611.001.00------------1.00----
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTTTTG..................................................241.000.00-1.00---------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTCTTTT...................................................271.000.00--1.00--------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTAATG........................................................211.000.00------1.00----------
..............................................................................................................................................................................CTACTTTTTCTTTTTTTTCTTG......................................................221.000.001.00----------------
...............................................................................................................................................................................TACTTTTTCTTTTTTTTTTCTAC....................................................2311.001.00--------------1.00--
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTG.........................................................211.000.00----1.00------------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCCTTT...................................................231.000.001.00----------------
.............................................................................................................................................................................................TTTTTCTACAGCTTTAAATG.........................................201.000.00----------1.00------
................................................................................................................................................................................ACTTTTTCTTTTTTTTTTCTGAT...................................................231.000.00-1.00---------------
......................................................................................................................................................................ATTGTTTCCTACTTTACG..................................................................181.000.00----------1.00------
..............................................................................................................................................................................CTACTTTTTCTTTTTTTAAG........................................................201.000.001.00----------------
..........................................................................................................................................................................TTTCCTACTTTTTCTTTTTTTTTTAAG.....................................................271.000.001.00----------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTCATT......................................................241.000.00---1.00-------------
............................................................................................................................................................................TCCTACTTTTTCTTTTTTTTTTCCTTT...................................................271.000.00-1.00---------------
...........................................................................................................................................................................TTCCTACTTTTTCTTTTTTTTTT........................................................2320.500.50---0.50-------------
....................................................................................................................................................................................TTTCTTTTTTTTTTCTACAG..................................................2020.500.50--0.50--------------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTTACAG.....................................................2480.120.12------0.12----------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTT.........................................................2080.120.12------0.12----------
.............................................................................................................................................................................CCTACTTTTTCTTTTTTTTTCTTA.....................................................2480.120.12--0.12--------------

Antisense strand
ACAAATCACCCTGCTGATCCCTGCCATACTTTTGACCTGCATAATTTCTAGGTCATTAAAATATTCTTAAAAAAATATAATTGGTCCTTAATTAGGTAATTCAATTCTATAAACTTGTTTCTCTATTTGTTAATTATTGCTATTGATCCATGAAGTGATACTAATAATTGTTTCCTACTTTTTCTTTTTTTTTTCTACAGCTTTACAAGAGGTGAGTAAAACTTTTTTTAGAATTTTTAAAAATACTTTG
..............................................................................((((((.(((.....)))....))))))........................(((((((((.((((............)))).)))))))))................................................................................
...........................................................................76...............................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
.................................................................................................................................................................................CTTTTTCTTTTTTTTTTCTCAGC.................................................. 231.000.00----------------1.00
..................................................................TTAAAAAAATATAATTGCTAG................................................................................................................................................................... 211.000.00------1.00----------