uc003ump.2_intron_1_0_chr7_92869248

GCATGTGGTTTTAGGGTATCTGTGATCTTGAAATAAGTTTTGAATCCTGTTTCATTTGGAAAGAGATAAAATCTATTTCTGTTCAGTGATTAATGACTTTTGTAATACTGACTGAATATTGAAAACTTCATGTTTTGTTCTTACTTCTAGCTCTGTTTAGATTTTGGTCACTAAACGCTTCTTTTTTTTTTTGCTTTCAGTTAGAGCCCTAACGTGATGTTAACTTTGGTAAGATTATAGCTTCCGTTTT ..................................................................................................................................(((((.((.((....(((((......)))))....))..)).)))))......................................................................... ............................................................................................................................125........................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR040018(GSM532903) G701N. (cervix)	SRR207111(GSM721073) Whole cell RNA. (cell line)	SRR037937(GSM510475) 293cand2. (cell line)	SRR029127(GSM416756) A549. (cell line)	SRR037934(GSM510472) 293cand4_rep3. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................................................................................................................TTCTTTTTTTTTTTGCTTGGCG..................................................	22		16.00	0.00	12.00	4.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTGGCG..................................................	21		15.00	0.00	9.00	5.00	-	-	-	-	-	-	-	1.00	-
....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGCG..................................................	20		7.00	0.00	6.00	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGC...................................................	19		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................ATGTTTTGTTCTTACTTCTAGCT..................................................................................................	23	1	3.00	3.00	-	-	3.00	-	-	-	-	-	-	-	-
..........................................AATCCTGTTTCATTTGG...............................................................................................................................................................................................	17	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GCTTCTTTTTTTTTTTGGGGG.....................................................	21		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTCCTG...................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTAGGG..................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTTCG...................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTCGGG..................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTCTTTTTTTTTTTGCTGTC....................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTGCTTTCAGTCAG..............................................	31		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTCTGG......................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTTTGC......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGCA..................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
............................TGAAATAAGTTTTGAATA............................................................................................................................................................................................................	18		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-
............................................................................................................................................................................AAACGCTTCTTTTTTTTTCTT.........................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTGGCC..................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................TTTTTTTTTTGCTTTCGAGG................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................GTTTTGTTCTTACTTTTTT....................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTCTTTTTTTTTTTGCGAGC....................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................AACGCTTCTTTTTTTTTTGG.........................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................................................................TGTTTTGTTCTTACTTTT......................................................................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TCTTTTTTTTTTTGCTTCTCC..................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................TTTTTTTTGCTTTCAGTTAGTTCA..........................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GCTTCTTTTTTTTTTTGC........................................................	18	4	0.25	0.25	0.25	-	-	-	-	-	-	-	-	-	-

GCATGTGGTTTTAGGGTATCTGTGATCTTGAAATAAGTTTTGAATCCTGTTTCATTTGGAAAGAGATAAAATCTATTTCTGTTCAGTGATTAATGACTTTTGTAATACTGACTGAATATTGAAAACTTCATGTTTTGTTCTTACTTCTAGCTCTGTTTAGATTTTGGTCACTAAACGCTTCTTTTTTTTTTTGCTTTCAGTTAGAGCCCTAACGTGATGTTAACTTTGGTAAGATTATAGCTTCCGTTTT
..................................................................................................................................(((((.((.((....(((((......)))))....))..)).))))).........................................................................
............................................................................................................................125........................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR040018(GSM532903)
G701N. (cervix)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR029127(GSM416756)
A549. (cell line)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

..................................................................................................................................................................................TTCTTTTTTTTTTTGCTTGGCG..................................................

16.00

0.00

12.00

4.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTGGCG..................................................

15.00

0.00

9.00

5.00

1.00

....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGCG..................................................

7.00

0.00

6.00

1.00

....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGC...................................................

3.00

0.00

3.00

.................................................................................................................................ATGTTTTGTTCTTACTTCTAGCT..................................................................................................

3.00

..........................................AATCCTGTTTCATTTGG...............................................................................................................................................................................................

2.00

................................................................................................................................................................................GCTTCTTTTTTTTTTTGGGGG.....................................................

2.00

0.00

2.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTCCTG...................................................

1.00

0.00

1.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTAGGG..................................................

1.00

0.00

1.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTTCG...................................................

1.00

0.00

1.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTCGGG..................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTCTTTTTTTTTTTGCTGTC....................................................

1.00

0.00

1.00

.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTGCTTTCAGTCAG..............................................

1.00

0.00

1.00

.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTCTGG......................................................

1.00

0.00

1.00

.............................................................................................................................................................................AACGCTTCTTTTTTTTTTTTTGC......................................................

1.00

0.00

1.00

....................................................................................................................................................................................CTTTTTTTTTTTGCTTGGCA..................................................

1.00

0.00

1.00

............................TGAAATAAGTTTTGAATA............................................................................................................................................................................................................

1.00

0.00

1.00

............................................................................................................................................................................AAACGCTTCTTTTTTTTTCTT.........................................................

1.00

0.00

1.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTGGCC..................................................

1.00

0.00

1.00

......................................................................................................................................................................................TTTTTTTTTTGCTTTCGAGG................................................

1.00

0.00

1.00

...................................................................................................................................GTTTTGTTCTTACTTTTTT....................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTCTTTTTTTTTTTGCGAGC....................................................

1.00

0.00

1.00

.............................................................................................................................................................................AACGCTTCTTTTTTTTTTGG.........................................................

1.00

0.00

1.00

..................................................................................................................................TGTTTTGTTCTTACTTTT......................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................TCTTTTTTTTTTTGCTTCTCC..................................................

1.00

0.00

1.00

........................................................................................................................................................................................TTTTTTTTGCTTTCAGTTAGTTCA..........................................

1.00

0.00

1.00

................................................................................................................................................................................GCTTCTTTTTTTTTTTGC........................................................

0.25