ID: uc003uiv.1_intron_5_0_chr7_87041350_r.3p
GENE: ABCB4(22)
chr7:87041300-87041549-


(1)
BRAIN 		(2)
BREAST 		(4)
CELL-LINE 		(9)
LIVER 		(6)
OTHER 		(2)
SKIN

Sense strand
GTTTTTGTCAAAACAATTCTGCATTACAGTGATTATTTCCATGGTATAAATGTTTAGAGAAGTTATCATTTACCCAAACTAATATAACTGGAGGTGGAACTTAAACCCACTCGGCCAGACTTAGAAGCCGTGCTCTTTCCACTACACAGCGCTAAAGGAGGCTGAAGAGATGGTTACAAGTATACTGATTTGCTTTTCAGGAATTCTGTGCAGAAGGCACACATCTATGGAATTACTTTTAGTATCTCAC
.......................................................................................((((.(((((.........)))))...)))).......((((((.(((((.........((((.((.....)))))))))))))))))...........................................................................
.......................................................................72.........................................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189783SRR343334SRR343337SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189782SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR343335SRR343336SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
............ACAATTCTGCATTACATG............................................................................................................................................................................................................................1856.401.20------2.201.40-----1.601.20---------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTT...........................................................................2216.006.00-2.001.00-2.00---1.00---------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTACA........................................................................2515.005.003.002.00----------------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGGTT...........................................................................2015.005.001.00---1.00---1.00---2.00-----------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGTTACA........................................................................2414.004.004.00-----------------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGGTTACA........................................................................2314.004.004.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTAC.........................................................................2413.003.002.00-1.00---------------------
.............................................................................................................................................................GAGGCTGAAGAGATGGTTACA........................................................................2113.003.002.001.00----------------------
............................................................................................................................................................GGAGGCTGAAGAGATGGTTACA........................................................................2213.003.003.00-----------------------
............................................................................AACTAATATAACTGGAGG............................................................................................................................................................1813.003.002.001.00----------------------
......................................................................................................................................................................................................AGGAATTCTGTGCAGAAGG.................................1913.003.001.002.00----------------------
.........................................................................................................................................................................................................................CACACATCTATGGAATTACTTC...........223.000.00-----3.00------------------
.................................................................................................................................................................................................................................TATGGAATTACTTTTAGTATA....212.000.00---2.00--------------------
.................................................................................................................................................................................................................................TATGGAATTACTTTTAGTATC....2112.002.00---2.00--------------------
..............................................................................................................................................................AGGCTGAAGAGATGGTTACAAGTATAC.................................................................2712.002.002.00-----------------------
......................................................................................................................................................................................................AGGAATTCTGTGCAGAAGGCACACA...........................2512.002.00-2.00----------------------
......................................................................................................................................................................................................AGGAATTCTGTGCAGAAGGCA...............................2112.002.001.00-1.00---------------------
..........................................................................CAAACTAATATAACTGGAGGTG..........................................................................................................................................................2212.002.002.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTACAA.......................................................................2612.002.001.001.00----------------------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGTTA..........................................................................2212.002.001.00--------1.00--------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGGTTAC.........................................................................2212.002.001.001.00----------------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGG.............................................................................1831.331.33--0.67-0.67-------------------
............ACAATTCTGCATTACA..............................................................................................................................................................................................................................1651.201.20------0.400.80----------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGGTTA..........................................................................2111.001.00---------1.00--------------
........CAAAACAATTCTGCACCCG...............................................................................................................................................................................................................................191.000.00----------1.00-------------
...............................................................................................................................................................................................GCTTTTCAGGAATTCTGTGCAGAAGGCA...............................2811.001.001.00-----------------------
...................................................................................................................................................AGCGCTAAAGGAGGCTGAAGAGATGGT............................................................................2711.001.001.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTACAAGTA....................................................................2911.001.00-1.00----------------------
.............................................................................ACTAATATAACTGGAGGTGGAACTT....................................................................................................................................................2511.001.001.00-----------------------
..................................................................................................................................................................................................................CAGAAGGCACACATCTATGGAATT................2411.001.001.00-----------------------
.............................................................................................................................................................GAGGCTGAAGAGATGGTT...........................................................................1821.001.001.00-----------------------
........................................................................................................................................TTCCACTACACAGCGCTAAAGG............................................................................................2211.001.00-1.00----------------------
.............................................................................................................................................................GAGGCTGAAGAGATGGTTAC.........................................................................2011.001.001.00-----------------------
............................................................................................................................................................GGAGGCTGAAGAGATGGTTATA........................................................................2211.001.00-1.00----------------------
...................................................................................................................................................................................................TTCAGGAATTCTGTGTGAG....................................191.000.00----------------1.00-------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGTTATA........................................................................2411.002.001.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTA..........................................................................2311.001.00-1.00----------------------
...........................................................................AAACTAATATAACTGGAGG............................................................................................................................................................1911.001.001.00-----------------------
...................................................................................................................CAGACTTAGAAGCCGTGCTCTTTCCACT...........................................................................................................2811.001.00-1.00----------------------
.............................................................................................................................................................GAGGCTGAAGAGATGGTTACAA.......................................................................2211.001.001.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGGTTATA........................................................................2511.001.00-1.00----------------------
.....................................................................................................................................................................................................CAGGAATTCTGTGCAGAAGGCACATA...........................261.000.00-1.00----------------------
...........................................................................AAACTAATATAACTGGAGGTG..........................................................................................................................................................2111.001.001.00-----------------------
..........................................................................................GAGGTGGAACTTAAACCCACT...........................................................................................................................................2111.001.00-1.00----------------------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGTTACAA.......................................................................2511.001.001.00-----------------------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGTTAC.........................................................................2311.001.001.00-----------------------
............................................................................AACTAATATAACTGGAGGTGG.........................................................................................................................................................2111.001.001.00-----------------------
........................................................................................................................................................................................CTGATTTGCTTTTCAGGAATT.............................................2111.001.00-1.00----------------------
...........................................................................................................................................................AGGAGGCTGAAGAGATGGTTACAA.......................................................................2411.001.00-1.00----------------------
............................................................................................................................................................GGAGGCTGAAGAGATGGTTA..........................................................................2011.001.001.00-----------------------
...................................................................................................................CAGACTTAGAAGCCGTGCTCTTTC...............................................................................................................2411.001.00-1.00----------------------
.................................................................................................................GCCAGACTTAGAAGCCGTGCT....................................................................................................................2111.001.001.00-----------------------
....................................................................................................................................................................................................TCAGGAATTCTGTGCAGAAGGC................................2211.001.001.00-----------------------
....................................................................................................................AGACTTAGAAGCCGTGCTC...................................................................................................................1911.001.001.00-----------------------
........................................................................................................................................................TAAAGGAGGCTGAAGAGATGGTTACA........................................................................2611.001.001.00-----------------------
............................................................................AACTAATATAACTGGAGGT...........................................................................................................................................................1911.001.001.00-----------------------
............................................................................................................................................................GGAGGCTGAAGAGATGGTT...........................................................................1911.001.00--1.00---------------------
......................................................................................................................................................................................................AGGAATTCTGTGCAGAAGGCACAC............................2411.001.001.00-----------------------
.....................................................................................................................................................................................................CAGGAATTCTGTGCAGAAGGCT...............................221.000.00-1.00----------------------
......................................................TAGAGAAGTTATCATTTCAGA...............................................................................................................................................................................211.000.00----------1.00-------------
...................................................................................................................................................................................................................AGAAGGCACACATCTATGGAATTA...............2411.001.00-1.00----------------------
....................................................................................................................................................GCGCTAAAGGAGGCTGAAGAGATGGTTACA........................................................................3011.001.001.00-----------------------
...............................................................................................................................................................................................................GTGCAGAAGGCACACATTTAT......................211.000.001.00-----------------------
.............................................................................................................................................................GAGGCTGAAGAGATGGTTACAAGTATA..................................................................2711.001.001.00-----------------------
.................................................................................ATATAACTGGAGGTGGAACATA...................................................................................................................................................221.000.001.00-----------------------
.........................................................................................................................................................AAAGGAGGCTGAAGAGATGG.............................................................................2011.001.00--1.00---------------------
....................................................................................................................................................GCGCTAAAGGAGGCTGAAGAGA................................................................................2211.001.001.00-----------------------
......................................................................................................................................................................................................AGGAATTCTGTGCAGAAGGCACACATCT........................2811.001.001.00-----------------------
........................................................................................................................................................................................CTGATTTGCTTTTCAGGAATTCT...........................................2311.001.00-1.00----------------------
..................................................................................................................................................CAGCGCTAAAGGAGGC........................................................................................1620.500.50----------------------0.50-
.............................................................................................................................................................GAGGCTGAAGAGATGGTTA..........................................................................1920.500.50---0.50--------------------
..........................................................................................................................................................AAGGAGGCTGAAGAGATGGT............................................................................2020.500.50-----------------------0.50
............ACAATTCTGCATTACATA............................................................................................................................................................................................................................1850.201.20-------------0.20----------

Antisense strand
GTTTTTGTCAAAACAATTCTGCATTACAGTGATTATTTCCATGGTATAAATGTTTAGAGAAGTTATCATTTACCCAAACTAATATAACTGGAGGTGGAACTTAAACCCACTCGGCCAGACTTAGAAGCCGTGCTCTTTCCACTACACAGCGCTAAAGGAGGCTGAAGAGATGGTTACAAGTATACTGATTTGCTTTTCAGGAATTCTGTGCAGAAGGCACACATCTATGGAATTACTTTTAGTATCTCAC
.......................................................................................((((.(((((.........)))))...)))).......((((((.(((((.........((((.((.....)))))))))))))))))...........................................................................
.......................................................................72.........................................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189783SRR343334SRR343337SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189782SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR343335SRR343336SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
..........................................................GAAGTTATCATTTACACT.............................................................................................................................................................................. 182.000.00-----------1.00---------1.00--
..............................................................................................TGGAACTTAAACCCATTGG......................................................................................................................................... 191.000.00-----------------1.00------
.............................................................................................................................................CTACACAGCGCTAAAGGG........................................................................................... 181.000.00-------------------1.00----
...TTTGTCAAAACAATTGTA..................................................................................................................................................................................................................................... 181.000.00-----------1.00------------
............................................................................................GGTGGAACTTAAACCCAA............................................................................................................................................ 181.000.00---------------1.00--------
..........................................................................................................CCACTCGGCCAGACTTGAC............................................................................................................................. 191.000.00------------------1.00-----
..........................................................GAAGTTATCATTTACAAT.............................................................................................................................................................................. 181.000.00--------------------1.00---