ID: uc003uio.2_intron_2_0_chr7_86828374_r.5p
GENE: (1)
chr7:86848542-86848791-


(3)
B-CELL
(6)
BREAST
(16)
CELL-LINE
(3)
CERVIX
(3)
HEART
(2)
HELA
(2)
LIVER
(1)
OTHER
(5)
SKIN

Sense strand
GCACCAGTGGCCTGGACAACAGACCTCTGTTTGGGGAGACGTCCGCCAAGGTGAGTGCGGATTGTGACTCCAGACTGGGATGGGGGGTGTGTCTGCTGCCTGCCCTCTGGCGGAGTCCGGGCTGCGTCTTTCTGCGGCTCCTAAAAGCACTTTTAGGGAGGAAGCTGGTTCTGCAATCCCACTTCCCTCTCAAGATGTTTGCCCGGCCAATCGTCGCCTGCTTTGGGACATGGTTGGCTAAGAGCCTTGA
.................................................................((((((.....(((.((((.(((......))).)))))))......))))))..(((((((......)))))))(((((((....)))))))..(((((.(((..........))))))))................................................................
...............................................................64..........................................................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
....................................................................TCCAGACTGGGATGGATGA...................................................................................................................................................................19116.000.0075.0018.0014.005.00-----------2.00---1.00-------------1.00--------
.................................................................................................................................................................................................................ATCGTCGCCTGCTTTGGGACATG..................2312.002.00--------2.00---------------------------------
...CCAGTGGCCTGGACAACAGA...................................................................................................................................................................................................................................2012.002.00-------------2.00----------------------------
......GTGGCCTGGACAACAGAC..................................................................................................................................................................................................................................1831.331.33------------------1.33-----------------------
............................................GCCAAGGTGAGTGCGGATTGTGA.......................................................................................................................................................................................2311.001.00----------------1.00-------------------------
.........................................................CGGATTGTGACTCCAGACTGG............................................................................................................................................................................2111.001.00------------------------1.00-----------------
.......................................................................................................................................................................................................TGCCCGGCCAATCGTCGCCTGC.............................2211.001.00-------------------------1.00----------------
.......................................................................................................................................................................GTTCTGCAATCCCACGC..................................................................171.000.00----------1.00-------------------------------
...............................................................................................................GGAGTCCGGGCTGCGTCAAA.......................................................................................................................201.000.00-----------1.00------------------------------
........................CTCTGTTTGGGGAGACGTCCG.............................................................................................................................................................................................................2111.001.00-------------------------------1.00----------
....................................................................TCCAGACTGGGATGGATAA...................................................................................................................................................................191.000.00-1.00----------------------------------------
.........................TCTGTTTGGGGAGACGTCC..............................................................................................................................................................................................................1911.001.00-------------------------------------1.00----
...................CAGACCTCTGTTTGGGGAGACGT................................................................................................................................................................................................................2311.001.00--------------------------------1.00---------
............................................GCCAAGGTGAGTGCGGATTGTG........................................................................................................................................................................................2211.001.00----1.00-------------------------------------
.....................................................AGTGCGGATTGTGACTCCAGA................................................................................................................................................................................2111.001.00--------------------------1.00---------------
.........GCCTGGACAACAGACCTC...............................................................................................................................................................................................................................1811.001.00---------1.00--------------------------------
............TGGACAACAGACCTCTGTTTTTT.......................................................................................................................................................................................................................231.000.00--------------------1.00---------------------
........................CTCTGTTTGGGGAGACGTC...............................................................................................................................................................................................................1911.001.00---------------------1.00--------------------
....................................................................TCCAGACTGGGATGGAGGA...................................................................................................................................................................191.000.001.00-----------------------------------------
....CAGTGGCCTGGACAACAGA...................................................................................................................................................................................................................................1920.500.50------0.50-----------------------------------
.....AGTGGCCTGGACAACAG....................................................................................................................................................................................................................................1730.330.33-----------------------------------------0.33

Antisense strand
GCACCAGTGGCCTGGACAACAGACCTCTGTTTGGGGAGACGTCCGCCAAGGTGAGTGCGGATTGTGACTCCAGACTGGGATGGGGGGTGTGTCTGCTGCCTGCCCTCTGGCGGAGTCCGGGCTGCGTCTTTCTGCGGCTCCTAAAAGCACTTTTAGGGAGGAAGCTGGTTCTGCAATCCCACTTCCCTCTCAAGATGTTTGCCCGGCCAATCGTCGCCTGCTTTGGGACATGGTTGGCTAAGAGCCTTGA
.................................................................((((((.....(((.((((.(((......))).)))))))......))))))..(((((((......)))))))(((((((....)))))))..(((((.(((..........))))))))................................................................
...............................................................64..........................................................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR029128(GSM416757)
H520. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
..............................................................................................................................TTTTAGGAGCCGCAGAAAGA........................................................................................................ 2012.002.00------1.00-----------------------1.00-----------
.........GAGGTCTGTTGTCCAGGC............................................................................................................................................................................................................................... 1812.002.00------------2.00-----------------------------
.........................................................................................CAGAGGGCAGGCAGCAGACA............................................................................................................................................. 2012.002.00-------2.00----------------------------------
.......................................................................................................................................................................GTTCTGCAATCCCACTCTG................................................................ 192.000.00------2.00-----------------------------------
..............GACAACAGACCTCTGTTTAGT....................................................................................................................................................................................................................... 211.000.00---------------------------------------1.00--
....................................................................................................CCCGGACTCCGCCAGAGGGCA................................................................................................................................. 2111.001.00---------------------------1.00--------------
.GTTGTCCAGGCCACTGGTG...................................................................................................................................................................................................................................... 1911.001.00-----------------------------1.00------------
............................................................................................................................................................................AGAGGGAAGTGGGATTGC............................................................ 1811.001.00-----------------------1.00------------------
........................................................................................................................................................................................................GCCCGGCCAATCGTCC.................................. 161.000.00---------1.00--------------------------------
...............................................................................................................GCAGAAAGACGCAGCCCGGACTCC................................................................................................................... 2411.001.00----------------------------1.00-------------
..................................................................................................................................................................................AACATCTTGAGAGGGAAGTGG................................................... 2111.001.00----------------1.00-------------------------
................................................................................................................AAAGACGCAGCCCGGACTC....................................................................................................................... 1911.001.00----1.00-------------------------------------
............................................................................................................................................................................................TGGCCGGGCAAACATCTTGAG......................................... 2111.001.00-----------------------------------1.00------
..............................................................................................................................................................................CTTGAGAGGGAAGTGGGATT........................................................ 2011.001.00----1.00-------------------------------------
..................................................................................................GCCCGGACTCCGCCAGAGGGCAGG................................................................................................................................ 2411.001.00-----1.00------------------------------------
............................................................................................................................................................................................GCCGGGCAAACATCTTGAG........................................... 1911.001.00------------------------------------1.00-----
................................................................................................CGGACTCCGCCAGAGGGCAGGCA................................................................................................................................... 2311.001.00----------------------------------1.00-------
...................................................................................................AGCCCGGACTCCGCCAGAGGGCAG............................................................................................................................... 2411.001.00-----------------1.00------------------------
.......................................................................................................................................................................................................AGGCGACGATTGGCCGGGCA............................... 2011.001.00-----------------1.00------------------------
...................................................................................................................................................................................................AGGCGACGATTGGCCGGGCAAACA............................... 2411.001.00-----------1.00------------------------------
...............................................................................................................................................................................TTGAGAGGGAAGTGGGAT......................................................... 1811.001.00-------1.00----------------------------------
..........................................................................................................................................................................................GCCGGGCAAACATCTTGAGAG........................................... 2111.001.00--------1.00---------------------------------
................................................AGGTGAGTGCGGATTACTG....................................................................................................................................................................................... 191.000.00----------1.00-------------------------------
..................GTCTCCCCAAACAGAGGTCTGT.................................................................................................................................................................................................................. 2211.001.00-----1.00------------------------------------
..........................................................................................................................................................ATTGCAGAACCAGCTTCCTCCCT......................................................................... 2311.001.00--------------1.00---------------------------
............................................................................................................................CTTTTAGGAGCCGCAGAAAGACG....................................................................................................... 2311.001.00-----1.00------------------------------------
.........................................................................................GCCAGAGGGCAGGCAGCAGACA........................................................................................................................................... 2211.001.00--------------------------------------1.00---
............................................................................................................................................................................GAGAGGGAAGTGGGATTGC........................................................... 1911.001.00--------------1.00---------------------------
...................................................................................CGCCAGAGGGCAGGCAGCAGACACACCCC.......................................................................................................................................... 2911.001.00----------------------1.00-------------------
.....................................ACTCACCTTGGCGGACGTC.................................................................................................................................................................................................. 1911.001.00-----1.00------------------------------------
......................................................................................................................................................................................................AGGCGACGATTGGCCGGGCAA............................... 2111.001.00----1.00-------------------------------------
.TTGTCCAGGCCACTGGTG....................................................................................................................................................................................................................................... 1820.500.50----------------------------------------0.50-
.........AGGTCTGTTGTCCAGGC................................................................................................................................................................................................................................ 1750.200.20---------0.20--------------------------------