ID: uc003uic.2_intron_9_0_chr7_84671602_r.3p
GENE: (7)
chr7:84671552-84671801-


(1)
BRAIN
(6)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
OTHER
(4)
SKIN
(1)
UTERUS

Sense strand
TTTAACTATGAGAAAAACATTTAATATTGAGGGCTAATACTGTCTTTTTCCTTATTTTAAAGTTCAAGGACTCAATATCTGGGTTCAGTGTCTTTGTAAACAATGACATCAATAAGACACTACCTGTAATAGCCACCAGTTTTAGTGAGTGGTAGAATTGTGTTGATAAATATTTATCTTTATTTTTTTTTTCATGTCAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGGACGACTTTTCT
...........................................................................................................(((((((.....(((((.......(((((........))).))))))).....)))))))...................................................................................
.....................................................................................................102.......................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR343335SRR189784SRR343337SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343336SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040024(GSM532909)
G613N. (cervix)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................................................................ATATTTATCTTTATTTTTT..............................................................19222.5022.5022.50----------------------
..........................................................................................................CATCAATAAGACACTACCTATTG.........................................................................................................................238.000.00-5.003.00--------------------
..........................................................................................................CATCAATAAGACACTACCTATT..........................................................................................................................224.000.00--4.00--------------------
..........................................................................................................CATCAATAAGACACTACCTAT...........................................................................................................................213.000.00-2.00------1.00--------------
............................................................................................................................................................................TTTATCTTTATTTTTTTTAAG.........................................................211.000.00-----1.00-----------------
.........................................................................................................................................................................................................ATGATGTAGGAGGACAACGCAGCC.........................2411.001.00---------------------1.00-
...........................................CTTTTTCCTTATTTTGTAT............................................................................................................................................................................................191.000.001.00----------------------
.............................................................................................................................................................................TTATCTTTATTTTTTTTAATG........................................................211.000.00-------1.00---------------
............................................................................................................................................................................TTTATCTTTATTTTTTTTCATT........................................................221.000.00-------1.00---------------
.........................................................................................................................................................................ATATTTATCTTTATTTCCC..............................................................191.000.001.00----------------------
................................................................................................................................................................................TCTTTATTTTTTTTTTCATGTCAG..................................................2411.001.00----------------1.00------
...........................................................................................................ATCAATAAGACACTACCTATTG.........................................................................................................................221.000.00----1.00------------------
............................................................................................................................................................................TTTATCTTTATTTTTTTTTTCACG......................................................241.000.00-----1.00-----------------
..............................................................................................................................................................................TATCTTTATTTTTTTTTTAATG......................................................221.000.00---------1.00-------------
............................................................................................................................................................................TTTATCTTTATTTTTTTAAAG.........................................................211.000.00-----1.00-----------------
...............................................................................................................................................................................ATCTTTATTTTTTTTTTATAT......................................................211.000.001.00----------------------
..............AAACATTTAATATTGGCC..........................................................................................................................................................................................................................181.000.001.00----------------------
.................................................................................................................................................................................CTTTATTTTTTTTTTCAAAAG....................................................211.000.00---------1.00-------------
...........................................................................................................................................................................ATTTATCTTTATTTTTTTTTTTG........................................................231.000.00-----1.00-----------------
...........................................................................................................................................................................ATTTATCTTTATTTTTTTTTTGCAG......................................................251.000.00-----------------1.00-----
........................................................................................................................................................................................................AATGATGTAGGAGGACAACGC.............................2111.001.00----------------------1.00
.........................................................................................................................................................................ATATTTATCTTTATTTTTTTATT..........................................................231.000.00---1.00-------------------
....................................................................................................................................................GTGGTAGAATTGTGTTCA....................................................................................181.000.00------------1.00----------
................................................................................................................................................................................................................................CTGATAAACAAGTGGACGAC......2011.001.00------------------1.00----
.............................................................................................................................................................................................................TGTAGGAGGACAACGT.............................161.000.00---------------1.00-------
...........................................................................................................................................................................ATTTATCTTTATTTTTTTTTTCCTTG.....................................................261.000.001.00----------------------
..............................................................................................................................................................................TATCTTTATTTTTTTTAATG........................................................201.000.00------1.00----------------
............................................................................................................................................................................TTTATCTTTATTTTTTTTTTG.........................................................211.000.00-------1.00---------------
.......................................................................................................................................................................................................GAATGATGTAGGAGGACAACGCAGCCTGA......................2911.001.00-------------1.00---------
........................................................................................................................................................................................................AATGATGTAGGAGGACAACGCAGCCTG.......................2711.001.00-------------------1.00---
.............................................................................................................................................................................TTATCTTTATTTTTTTTTTTAAG......................................................231.000.00------1.00----------------
.............................................................................................................................................................................TTATCTTTATTTTTTTTCATT........................................................211.000.00-----------1.00-----------
..............................................................................................................................................................................TATCTTTATTTTTTTTTTTTAG......................................................221.000.00------1.00----------------

Antisense strand
TTTAACTATGAGAAAAACATTTAATATTGAGGGCTAATACTGTCTTTTTCCTTATTTTAAAGTTCAAGGACTCAATATCTGGGTTCAGTGTCTTTGTAAACAATGACATCAATAAGACACTACCTGTAATAGCCACCAGTTTTAGTGAGTGGTAGAATTGTGTTGATAAATATTTATCTTTATTTTTTTTTTCATGTCAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGGACGACTTTTCT
...........................................................................................................(((((((.....(((((.......(((((........))).))))))).....)))))))...................................................................................
.....................................................................................................102.......................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR343335SRR189784SRR343337SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343336SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040024(GSM532909)
G613N. (cervix)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................CTTTTTCCTTATTTTAAAGA........................................................................................................................................................................................... 204.000.00----3.00---1.00--------------
............................................................................................TTTGTAAACAATGACTTG............................................................................................................................................ 181.000.00---1.00-------------------
...........................................................................................CTTTGTAAACAATGACTG............................................................................................................................................. 181.000.00---1.00-------------------
............................................................................................................................................................................................................................CAGCCTGATAAACAAGTG............ 181.000.00----------1.00------------
............................................................................................................................................................................................................................CAGCCTGATAAACAAATC............ 181.000.00--------------1.00--------
.........................................................................................................................................................................................TTTTTTTCATGTCAGTTTT.............................................. 191.000.00---1.00-------------------
.............................................................................................................................................................................TTATCTTTATTTTTTTTTTGAA....................................................... 221.000.00--------------------1.00--