| (1) B-CELL | (9) CELL-LINE | (1) CERVIX | (4) HEART | (1) HELA | (1) SKIN |
| CAAATATTGTTCATTCAAAATAACGTAGCCATACCACCTATGGAGTACCCAAAATAGAAATTAACTGATTATATATTCAGTGTCAATAATTTTGATTCTATATTCATTTTTAACTCTAGAATATTTTTTCTCTGTAATTTTTATTTCAACACAGCATTCCTAGTTTTAACCACGACTTTTTTTTTTTTTCCCATAAACAGGAATATTTGGATGTTTTGGGAAGACCAATGGTTTTAGCAGGAGACAAAGC .............................................................................................................((((..(((((((.........((((...............)))).)))).)))..))))................................................................................. ................................................................................................97.....................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR040008(GSM532893) G727N. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................TTTTTTTTTTCCCATATCCG................................................... | 20 | 5.00 | 0.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCTTTG........................................................ | 23 | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTTTTTTCCCATATCCG................................................... | 22 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCTTTT........................................................ | 23 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTCG............................................................. | 18 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TTTTTTTTTTTTTCCCATATCCG................................................... | 23 | 2.00 | 0.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCTG.......................................................... | 21 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCCTTG....................................................... | 21 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTTTTTTTCCCATATCCG................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTTTTTTCCCATATCCG................................................... | 21 | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTTTTTTTTCCCATAACCG................................................... | 20 | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTGTTG........................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................ATATTTTTTCTCTGTAATTTTTATTTCAACACAG................................................................................................ | 34 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCGGAT....................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCGGGG....................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CTTTTTTTTTTTTTCCCATGGGT.................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTTTTTTCCCATATCCA................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCAGG......................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCCTGCC...................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................ACCACGACTTTTTTTTTTTTTCTG.......................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTAATG.......................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................ATTCATTTTTAACTCTAA................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CTTTTTTTTTTTTTCCCAATTG..................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTCCCC........................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTTTTTTCCCATAAACAAGG................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CGACTTTTTTTTTTTTTAAAG......................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTAG........................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTCTTG........................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................TTTTTCTCTGTAATTTTTAGAAC....................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCGGTG....................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................ATTTTTAACTCTAGAAGGCG............................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................ATGGTTTTAGCAGGAGACA.... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTCG.............................................................. | 17 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTAAAA........................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................AATTTTTATTTCAACACAT................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTCAGG.......................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTTTTTTCCCATATCCA................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................CATACCACCTATGGAGCG........................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCCTGG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CTTTTTTTTTTTTTCCCATATCGG................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCTT.......................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCCGGG....................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CGACTTTTTTTTTTTTTATG.......................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTCTGG.......................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................TTCATTTTTAACTCTTACG................................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ACTTTTTTTTTTTTTCCCGC........................................................ | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTTTTTTCCCATAATG.................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTTCTATG........................................................ | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................ACGACTTTTTTTTTTTTCTCC.......................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................ATTTTTAACTCTAGAAGGCT............................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| CAAATATTGTTCATTCAAAATAACGTAGCCATACCACCTATGGAGTACCCAAAATAGAAATTAACTGATTATATATTCAGTGTCAATAATTTTGATTCTATATTCATTTTTAACTCTAGAATATTTTTTCTCTGTAATTTTTATTTCAACACAGCATTCCTAGTTTTAACCACGACTTTTTTTTTTTTTCCCATAAACAGGAATATTTGGATGTTTTGGGAAGACCAATGGTTTTAGCAGGAGACAAAGC .............................................................................................................((((..(((((((.........((((...............)))).)))).)))..))))................................................................................. ................................................................................................97.....................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR040008(GSM532893) G727N. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................CACGACTTTTTTTTTTTTTTGT.......................................................... | 22 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................ATTAACTGATTATATGG.............................................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .........................................................................................................................................................................CCACGACTTTTTTTTTTTTATGT.......................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTTTTTTCCCATAATTA................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..........................................................................................................................................................................CACGACTTTTTTTTTTTTGT............................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................CACGACTTTTTTTTTTTTTTTGT......................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................GAAAAAAAAAAAAAGTCGT............................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CCATTGGTCTTCCCA................... | 15 | 9 | 0.44 | 0.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | 0.11 | 0.11 | 0.11 |
| ........................................................................................................................................................................................................................TGGGAAGACCAATGGCC................. | 17 | 0.11 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - |