ID: uc003uhj.2_intron_10_0_chr7_80433565_r.3p
GENE: (7)
chr7:80433515-80433764-


(1)
AGO2.ip
(3)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(3)
HEART
(1)
HELA
(1)
OTHER
(9)
SKIN
(1)
XRN.ip

Sense strand
CCTGCACTTCCTGTGGTACTCGACATTCCAAATGTGGCATGGTGTGTGAATGCAATTACTGCTTTTAGAAATGTGCCTGTAAATGTTGAATTGTTTTTTTCTACCAAAGATGGGGAAGGCATCTGCCTGTGGTCTACTTGGATGACAGAAGATGGATTTTCATAATGAATATATACCTAGTCTTTTACCTTTTTTTCTAGAACCTATGTTTGTAGATGCACATGTCATCCCAGATGGTACTGATCCAAAT
........................................................................((((((.........(((........)))..(((....)))...))))))....((((.((((....)))).))))......................................................................................................
....................................................................69...............................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.........................................................................TGCCTGTAAATGTTGATCCT.............................................................................................................................................................2047.000.0018.0015.00-6.005.00---2.00-------------1.00---
...............................................................................................................................TGTGGTCTACTTGGATAAC........................................................................................................198.000.00--2.00---2.00---1.00-----1.00-1.00-----1.00-
..............................................................................................................................CTGTGGTCTACTTGGATAA.........................................................................................................197.000.00--5.00-------1.00------1.00--------
.........................................................................TGCCTGTAAATGTTGATCC..............................................................................................................................................................193.000.002.00---1.00---------------------
..................................................................AGAAATGTGCCTGTAGTCC.....................................................................................................................................................................192.000.00---------2.00----------------
.................................................................................................................................TGGTCTACTTGGATGGGA.......................................................................................................182.000.00---------------1.00----1.00-----
.........................................................................TGCCTGTAAATGTTGACCCT.............................................................................................................................................................201.000.001.00-------------------------
............................................................................................................................................................................................................TATGTTTGTAGATGCACATGTCATCCCAG.................2911.001.00-----1.00--------------------
......................................................................................................................................TACTTGGATGACAGACCGC.................................................................................................191.000.00-----------------------1.00--
.................................................................................................................................TGGTCTACTTGGATGGGAG......................................................................................................191.000.00-------------------------1.00
..............................................................................................................................CTGTGGTCTACTTGGATGACAGAAGATGGATTTTCATAATGAATATATACCTAGTCTTTTACCTTTTTTTCTAG..................................................7411.001.00------------1.00-------------
.............................................................................................................ATGGGGAAGGCATCTGCCTGTGGTCTACCTG..............................................................................................................311.000.00-----------1.00--------------
........................................................................................................CAAAGATGGGGAAGGTCT................................................................................................................................181.000.00-------------1.00------------
.....................................................................................TTGAATTGTTTTTTTAGCC..................................................................................................................................................191.000.00-------------------1.00------
............................................................................................................................................................................................................TATGTTTGTAGATGCACATG..........................2011.001.00-----1.00--------------------
.......................................................................................................................................................................................TTTACCTTTTTTTCTAGTTTA..............................................211.000.00-----------1.00--------------
..........................................................................................................................................................................................................................CACATGTCATCCCAGATGGT............2011.001.00---------------------1.00----

Antisense strand
CCTGCACTTCCTGTGGTACTCGACATTCCAAATGTGGCATGGTGTGTGAATGCAATTACTGCTTTTAGAAATGTGCCTGTAAATGTTGAATTGTTTTTTTCTACCAAAGATGGGGAAGGCATCTGCCTGTGGTCTACTTGGATGACAGAAGATGGATTTTCATAATGAATATATACCTAGTCTTTTACCTTTTTTTCTAGAACCTATGTTTGTAGATGCACATGTCATCCCAGATGGTACTGATCCAAAT
........................................................................((((((.........(((........)))..(((....)))...))))))....((((.((((....)))).))))......................................................................................................
....................................................................69...............................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................TCCAAGTAGACCACAGGC............................................................................................................ 1812.002.00-------2.00------------------
............................................................................................................................GTCATCCAAGTAGACCACAGGC........................................................................................................ 2211.001.00--------------1.00-----------