ID: uc003tyc.2_intron_18_0_chr7_72925183_r.3p
GENE: (1)
chr7:72925133-72925382-


(4)
AGO2.ip 		(15)
B-CELL 		(3)
BRAIN 		(17)
BREAST 		(40)
CELL-LINE 		(1)
FIBROBLAST 		(4)
HEART 		(3)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(4)
OTHER 		(2)
RRP40.ip 		(33)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACTGCGCCCGGCCTCCAATTCCATTTTTATCCTCTCATGCTACACATTTTAAAAAGGAGACTAGATTTTTTTCTGTATATAAGTATCTTATGGGTATGGGTTTGTCGTCTCTGTTGCTTGCATATTGTTTTCCTGAACTACTGCCAACAGAGAGTATGAAGCCCGCTTGGAAAGGTACAGTGAGCGCATTTGGACGTGCA
.........................................................................................................((((((..(((.....((((((((((((...)))))..)))))))...)))))))))((((...(((....((((....))))...)))))))....................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGA.................................................231250.00250.00100.00-17.0015.00--2.004.004.004.004.005.004.005.002.004.001.00-2.00-1.002.003.002.001.002.002.002.001.002.002.002.003.001.002.00-1.001.00-2.001.00--1.00--2.001.002.00-----1.001.00---1.001.001.00----1.001.001.00-1.001.001.00----1.001.001.00-1.001.00-1.00-1.001.001.00-1.00--1.00------1.00--1.001.001.00---1.00-1.001.001.001.001.00----1.00---1.001.00-1.001.00--1.00
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAA................................................24120.00250.003.00-1.001.00----1.001.00--------------------1.00---1.00----------1.00----1.00-1.001.00---1.001.001.00-----------------------------1.00-----------1.001.00----------------1.00------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAG..................................................22119.0019.00----1.00---1.001.00-----------1.00--1.001.00---------1.00--1.00-1.001.00-----1.00----1.00-1.00-------1.00-----------1.00---------------------1.001.00---------1.00---------1.00--------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAAC....................................................20116.0016.00----13.00------------3.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTTTCCTGAACTACTGCCAACAGA.................................................24111.0011.006.00--1.00----1.00---------1.001.00------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................GTTTTCCTGAACTACTGCCAACAG..................................................2416.006.00------5.00-------------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGT.................................................2315.0019.003.00-----------------------------------------1.00---------------------------------------------------------------------------1.00-------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAAA...............................................2515.00250.003.00-------------------------------------1.00------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAG................................................2415.005.002.00---------------1.00-----------2.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAAGA................................................2414.002.003.00-------------------------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................TTTTCCTGAACTACTGCCAACAG..................................................2313.003.00-------------------1.00---------------1.00-----------------------------------------------------------1.00------------------------------------
.............................................................................................................................................................................................................................AAGGTACAGTGAGCGCATTTGGA......2312.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGTA................................................2412.0019.001.00--------------------------------------------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................................CATATTGTTTTCCTGAACTACTGCCAACAGA.................................................3112.002.00-------------------------------------1.00-----------------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................GCATATTGTTTTCCTGAACTACT..........................................................2312.002.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AAAGGTACAGTGAGCGCATT..........2012.002.00--------------2.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................AAAAGGAGACTAGATTTTTTTC...............................................................................................................................2212.002.00--------------------2.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACA...................................................2112.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AAGGTACAGTGAGCGCAT...........1812.002.00-------------------------------------------------1.00--------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGC.................................................2311.0019.00------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................TACAGGCGTGAACCACTGCGCCCGGCTTG.........................................................................................................................................................................................291.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGCTTGGAAAGGTACAGT...................1811.001.00--------------------------------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................................................................................................................................CTTGGAAAGGTACAGTGAGCG..............2111.001.00------------------------------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................ATATTGTTTTCCTGAACTACTGCCAACAG..................................................2911.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------
.................................GATTACAGGCGTGAACCACTGCGCCC...............................................................................................................................................................................................2601.001.00-------------------------------------------------------------------------------------1.00----------------------------------------------
......................................................................................................................................................................................................................GCTTGGAAAGGTACAGTGAGC...............2111.001.00-----------------------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGCCCGCTTGGAAAGGTACAGTGAG................2511.001.00------------------------------------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................TATTGTTTTCCTGAACTACTGCCAAC....................................................2611.001.00-------------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAAAGGTACAGTGAGCGCATTTG........2411.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................TATCTTATGGGTATGGGTTTGTCGTCTCTGTTGCTTGCATATTGTTTTCCTGAACTACTGCCAACAG..................................................6711.001.00-----------------------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................................CTGCCAACAGAGAGTATGAAGCCCGCTT................................2811.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................TTCCTGAACTACTGCCAACAGA.................................................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTTTCCTGAACTACTGCCAACAGAA................................................2511.0011.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACCGA.................................................2311.0016.00---------------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................TATTGTTTTCCTGAACTACTGC........................................................2211.001.00-------------------------------------------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................GGTACAGTGAGCGCATTTGGACG....2311.001.00-------------------------------------------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................GAAGCCCGCTTGGAAAGGT........................1911.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CCGCTTGGAAAGGTACA.....................1711.001.00---------------------------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACGGA.................................................2311.0016.001.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................CAGTGAGCGCATTTGGACGT...2011.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AAGGTACAGTGAGCGCATTT.........2011.001.00----------------------------------------------------------------------------------------------------------1.00-------------------------
.................................................................................................................................................................................................................................TACAGTGAGCGCATTTGGACGT...2211.001.00-----------------------------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................ATTGTTTTCCTGAACTACTGCCAACAGA.................................................2811.001.00----------------------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................GAAAGGTACAGTGAGCGCATTTGG.......2411.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................CATATTGTTTTCCTGAACTACTG.........................................................2311.001.00---------------------------------------------------------------------------------------------------------------------------------1.00--
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAATA..............................................2611.00250.00-------------------------------------------------------1.00----------------------------------------------------------------------------
.....................................ACAGGCGTGAACCACTGCGCCCGCC............................................................................................................................................................................................251.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAT................................................2411.00250.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAAGAA...............................................2511.002.00-------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGCATTTGGACGTGCA1811.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TTGCATATTGTTTTCCTGAACTACT..........................................................2511.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGCA................................................2411.0019.00------------1.00-----------------------------------------------------------------------------------------------------------------------
...TCCGCCCGCCTCGGCCATTA...................................................................................................................................................................................................................................201.000.00-----------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TTGCATATTGTTTTCGT..................................................................171.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-
...........................................................................................................................................................................................................GTATGAAGCCCGCTTGGAAAGG.........................2211.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAA..................................................2211.002.00-------1.00----------------------------------------------------------------------------------------------------------------------------
......................................CAGGCGTGAACCACTGCGCCCGGCTTG.........................................................................................................................................................................................271.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGTACAGTGAGCGCATTT.........1911.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAGA...............................................2511.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
.............................CTGGGATTACAGGCGTGAACCAA......................................................................................................................................................................................................231.000.00--------------------------------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACATC.................................................2311.002.00----------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TGGAAAGGTACAGTGAGCGCAT...........2211.001.00---------------------------------------------------------------------------------------------------------------------------1.00--------
...............................................................................................................................................................................TGTTTTCCTGAACTACTGCCAACAGA.................................................2611.001.00---------------------------------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACATA.................................................2311.002.00----------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TGGAAAGGTACAGTGAGCGCATTTGGACGTGC.3211.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------
.......................................AGGCGTGAACCACTGCGCCCGGAA...........................................................................................................................................................................................241.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AAGGTACAGTGAGCGCATTTGG.......2211.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................AAAGGTACAGTGAGCGCAT...........1911.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAAGAGA.................................................231.000.00------------------------------------------------------------------------------------------------------------------------------1.00-----
............................................................................................................................................................................TATTGTTTTCCTGAACTACTGCC.......................................................2311.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------
..................................................................................................................................................................................TTTCCTGAACTACTGCCAACAGAAAA..............................................2611.00250.00-------------------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................ATATTGTTTTCCTGAAC..............................................................1740.500.50---------------------------------------------------------------0.50--------------------------------------------------------------------
......................................................................................................................................................................................CTGAACTACTGCCAACAGA.................................................1920.500.50--------------0.50---------------------------------------------------------------------------------------------------------------------

Antisense strand
TGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACTGCGCCCGGCCTCCAATTCCATTTTTATCCTCTCATGCTACACATTTTAAAAAGGAGACTAGATTTTTTTCTGTATATAAGTATCTTATGGGTATGGGTTTGTCGTCTCTGTTGCTTGCATATTGTTTTCCTGAACTACTGCCAACAGAGAGTATGAAGCCCGCTTGGAAAGGTACAGTGAGCGCATTTGGACGTGCA
.........................................................................................................((((((..(((.....((((((((((((...)))))..)))))))...)))))))))((((...(((....((((....))))...)))))))....................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
....CCGCCCGCCTCGGCCTCCCAGGC............................................................................................................................................................................................................................... 235.000.00-4.00---1.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAGGC.............................................................................................................................................................................................................................. 245.000.00-3.00---2.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGTGCTGGC........................................................................................................................................................................................................................ 302.000.00-2.00----------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGTGGG........................................................................................................................................................................................................................... 272.000.00-2.00----------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGGC............................................................................................................................................................................................................................. 252.000.00-2.00----------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGTGGC........................................................................................................................................................................................................................... 272.000.00-2.00----------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAGGCT.............................................................................................................................................................................................................................. 242.000.00-----2.00------------------------------------------------------------------------------------------------------------------------------
..........................................................CGGCCTCCAATTCCATTATGG........................................................................................................................................................................... 211.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................TGAACTACTGCCAACATTG................................................ 191.000.00--------------------------------------------1.00---------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAGGGT.............................................................................................................................................................................................................................. 241.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...........................................GCCGGGCGCAGTGGTTCAC............................................................................................................................................................................................ 1901.001.00----------1.00-------------------------------------------------------------------------------------------------------------------------
.........................................GGGCGCAGTGGTTCACGC............................................................................................................................................................................................... 1801.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAG............................................................................................................................................................................................................................... 231.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAGTA.............................................................................................................................................................................................................................. 241.000.00---------------------------------1.00--------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAGGCC.............................................................................................................................................................................................................................. 241.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
...........................TGCTGGGATTACAGGCGTGAATA........................................................................................................................................................................................................ 231.000.00---------------------------------------------------------------------------------------------------1.00--------------------------------
....CCGCCCGCCTCGGCCTCCCAAGTCC............................................................................................................................................................................................................................. 251.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGTGTCC.......................................................................................................................................................................................................................... 281.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...TCCGCCCGCCTCGGCCTCCCAAGGAC............................................................................................................................................................................................................................. 261.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...TCCGCCCGCCTCGGCCTGGAC.................................................................................................................................................................................................................................. 211.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCGTCC............................................................................................................................................................................................................................... 231.000.00--------------------------------------------------------------------------------1.00---------------------------------------------------
...TCCGCCCGCCTCGGCCTCCCAGAGG.............................................................................................................................................................................................................................. 251.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGGGC............................................................................................................................................................................................................................ 261.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GTATGGGTTTGTCGTAA.......................................................................................... 171.000.00----------------------------------------------------------------------------------------------1.00-------------------------------------
....CCGCCCGCCTCGGCCTCCCAAAGGCC............................................................................................................................................................................................................................ 261.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCG.................................................................................................................................................................................................................................. 201.000.00--------------------------------------------------------------------------------------------------------------------1.00---------------
.......................................................................................................AAGGAGACTAGATTTTCTG................................................................................................................................ 191.000.00--------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................ACCACTGCGCCCGGCCTCCAC...................................................................................................................................................................................... 211.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
...........................TGCTGGGATTACAGGCGTGAATT........................................................................................................................................................................................................ 231.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------
....CCGCCCGCCTCGGCCTCCCGTCA............................................................................................................................................................................................................................... 231.000.00--------------------------------------------------------------------------------------------------------------1.00---------------------
..........................................GCCGGGCGCAGTGGTTCACG............................................................................................................................................................................................ 2001.001.00-------------------------------------------------------------------------------------------1.00----------------------------------------
..........................................................AAATGGAATTGGAGGCCG.............................................................................................................................................................................. 1840.250.25----------------------------------------------------------------0.25-------------------------------------------------------------------