uc003tug.2_intron_9_0_chr7_65226736

AGCAGAACATTCAGAATCAGGTCAGCTCGTGGGTGTGGACCTGAACACAGGTAAGAGAATGCAACTGTTTGTAGAGGAAAAACTAGATGTAGTACATGTGAGTTGAAGCCAGGAAAGATTCAAAATGGGGACCAAAAAAAAAATCTTTTGCTTTGCAATTTGACACCAGTACTATTAGGGAAGTCTGGGTTCTAAAATGGGATAAAATAGGATATTAATAAAAAATGGAATGACTAGGTATAATAATTAA
...........................................................(((((....)))))..((...(((((.(((.....))).)).)))....))..((((((((.....(((...))).......)))))))).....................................................................................................
.........................................................58............................................................................................152................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

SRR553576(SRX182782)
source: Testis. (testes)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)

TAX577743(Rovira)
total RNA. (breast)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

TAX577579(Rovira)
total RNA. (breast)

SRR553574(SRX182780)
source: Heart. (Heart)

SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577589(Rovira)
total RNA. (breast)

TAX577738(Rovira)
total RNA. (breast)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

TAX577744(Rovira)
total RNA. (breast)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR189784

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

GSM532876(GSM532876)
G547T. (cervix)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

TAX577740(Rovira)
total RNA. (breast)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)

SRR029124(GSM416753)
HeLa. (hela)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577588(Rovira)
total RNA. (breast)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

TAX577590(Rovira)
total RNA. (breast)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR029132(GSM416761)
MB-MDA231. (cell line)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR189786

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577746(Rovira)
total RNA. (breast)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)

SRR040036(GSM532921)
G243N. (cervix)

GSM416733(GSM416733)
HEK293. (cell line)

SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)

SRR037931(GSM510469)
293GFP. (cell line)

SRR040008(GSM532893)
G727N. (cervix)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

TAX577739(Rovira)
total RNA. (breast)

SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

TAX577741(Rovira)
total RNA. (breast)

SRR015447(SRR015447)
nuclear small RNAs. (breast)

SRR029127(GSM416756)
A549. (cell line)

SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)

TAX577742(Rovira)
total RNA. (breast)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)

SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)

SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR029129(GSM416758)
SW480. (cell line)

SRR189782

SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)

SRR029128(GSM416757)
H520. (cell line)

SRR029126(GSM416755)
143B. (cell line)

SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)

SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)

SRR029131(GSM416760)
MCF7. (cell line)

SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR029130(GSM416759)
DLD2. (cell line)

..............................................................AACTGTTTGTAGAGGAAACTGA......................................................................................................................................................................

53.33

2.33

2.67

5.00

0.33

2.33

3.67

0.33

1.00

1.67

1.00

0.33

0.67

1.33

0.33

1.00

0.67

1.00

0.67

1.00

1.33

0.33

0.67

0.33

0.67

1.00

0.33

0.67

0.33

0.67

0.33

0.67

0.33

0.67

0.33

..............................................................AACTGTTTGTAGAGGAAACT........................................................................................................................................................................

12.00

2.33

6.00

1.33

1.00

0.33

1.00

0.33

0.67

0.33

..............................................................AACTGTTTGTAGAGGAAACTG.......................................................................................................................................................................

10.33

2.33

0.33

0.67

0.33

0.67

1.00

1.33

0.67

0.33

0.67

0.33

..............................................................AACTGTTTGTAGAGGAAAC.........................................................................................................................................................................

8.33

2.33

2.67

1.00

0.33

1.00

1.33

0.67

0.33

..............................................................AACTGTTTGTAGAGGAAACTGT......................................................................................................................................................................

4.33

2.33

0.33

0.67

0.33

...............................................................ACTGTTTGTAGAGGAAACTGA......................................................................................................................................................................

4.00

0.00

1.00

..............................................................................................................................GGGGACCAAAAAAAAAATAAAA......................................................................................................

3.00

0.00

3.00

..............................................................AACTGTTTGTAGAGGAAA..........................................................................................................................................................................

2.33

2.00

0.33

...................................TGGACCTGAACACAGGTGA....................................................................................................................................................................................................

2.00

0.00

2.00

.............................................................CAACTGTTTGTAGAGGAAACT........................................................................................................................................................................

2.00

0.00

2.00

............................................................................................................................ATGGGGACCAAAAAAAAAA...........................................................................................................

1.50

0.50

0.17

............................................................................................................................ATGGGGACCAAAAAAAAA............................................................................................................

1.50

0.17

0.33

0.17

...............................................CAGGTAAGAGAATGCAACTGTT.....................................................................................................................................................................................

1.33

..............................................................AACTGTTTGTAGAGGAAAATGAG.....................................................................................................................................................................

1.00

0.00

1.00

............................GTGGGTGTGGACCTGAACACAGGTGAG...................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................GGGGACCAAAAAAAACTT..........................................................................................................

1.00

..............................................................AACTGTTTGTAGAGGACA..........................................................................................................................................................................

1.00

0.00

1.00

..............................................................AACTGTTTGTAGAGGAAAAT........................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................GGGGACCAAAAAAAAAACAA........................................................................................................

1.00

0.00

1.00

..............................................................AACTGTTTGTAGAGGATACT........................................................................................................................................................................

1.00

0.00

1.00

..............................................................AACTGTTTGTAGAGGAAAGT........................................................................................................................................................................

1.00

2.33

0.67

0.33

...............................................................................................................................................................................................CTAAAATGGGATAAAGAA.........................................

1.00

0.00

1.00

..............................................................AACTGTTTGTAGAGGAAACTGC......................................................................................................................................................................

1.00

2.33

0.33

...............................GGTGTGGACCTGAACACAGGTGA....................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................GGGGACCAAAAAAAA.............................................................................................................

1.00

.............................TGGGTGTGGACCTGAACACAGGTGAGC..................................................................................................................................................................................................

1.00

0.00

1.00

.......................AGCTCGTGGGTGTGGACCTGAACACAGGTG.....................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................TGTTTGTAGAGGAAACTGA......................................................................................................................................................................

1.00

0.00

1.00

..............................................................AACTGTTTGTAGAGGAAAATGA......................................................................................................................................................................

1.00

0.00

1.00

...................................TGGACCTGAACACAGGTG.....................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................TTTGACACCAGTACTATTTTC.......................................................................

1.00

0.00

1.00

..............................GGGTGTGGACCTGAACACAGGTGAG...................................................................................................................................................................................................

1.00

0.00

1.00

.............................................................................................................................TGGGGACCAAAAAAAAAA...........................................................................................................

0.89

0.11

0.22

0.11

0.22

0.11

..............................................................AACTGTTTGTAGAGGAAAG.........................................................................................................................................................................

0.67

2.33

0.33

.............................TGGGTGTGGACCTGAACACAGG.......................................................................................................................................................................................................

0.67

0.33

.................................TGTGGACCTGAACACAGG.......................................................................................................................................................................................................

0.67

..............................................................AACTGTTTGTAGAGGAAAGTGA......................................................................................................................................................................

0.67

2.33

0.33

..............................................................AACTGTTTGTAGAGGAAACTAA......................................................................................................................................................................

0.67

2.33

0.33

................TCAGGTCAGCTCGTGGGTGTGGACC.................................................................................................................................................................................................................

0.50

...................................................................................TAGATGTAGTACATGTGAGTTGAAGCCAGG.........................................................................................................................................

0.50

..................AGGTCAGCTCGTGGGTGTGG....................................................................................................................................................................................................................

0.50

..........................TCGTGGGTGTGGACCTGAACAC..........................................................................................................................................................................................................

0.50

..................................................................................CTAGATGTAGTACATGTGAGTTGAAGCC............................................................................................................................................

0.50

...................................................................................TAGATGTAGTACATGTGAGTTGAAGC.............................................................................................................................................

0.50

......................................................................................ATGTAGTACATGTGAGTTGAAGCCAG..........................................................................................................................................

0.50

.........TTCAGAATCAGGTCAGCTCGTGGG.........................................................................................................................................................................................................................

0.50

...................................................................................TAGATGTAGTACATGTGAGTTGAAGCC............................................................................................................................................

0.50

.............................................................CAACTGTTTGTAGAGGA............................................................................................................................................................................

0.50

...........................CGTGGGTGTGGACCTGAAC............................................................................................................................................................................................................

0.50

.........................................................................GAGGAAAAACTAGATGTAG..............................................................................................................................................................

0.50

..............................................................AACTGTTTGTAGAGGAAACTCA......................................................................................................................................................................

0.33

2.33

0.33

..............................................................AACTGTTTGTAGAGGAAACCGA......................................................................................................................................................................

0.33

2.33

0.33

................................................................................................................................................................................................TAAAATGGGATAAAATAGGATA....................................

0.33

..................................GTGGACCTGAACACAGGTAAGAGAATGCAACTG.......................................................................................................................................................................................

0.33

............................GTGGGTGTGGACCTGAACACAGGTAAGAGA................................................................................................................................................................................................

0.33

..............................................................AACTGTTTGTAGAGGAAACA........................................................................................................................................................................

0.33

2.33

0.33

..CAGAACATTCAGAATCAGGTCAG.................................................................................................................................................................................................................................

0.33

......ACATTCAGAATCAGGTCAGCT...............................................................................................................................................................................................................................

0.33

..CAGAACATTCAGAATCAGG.....................................................................................................................................................................................................................................

0.33

.........................................TGAACACAGGTAAGAGAATGCAACTG.......................................................................................................................................................................................

0.33

...............................GGTGTGGACCTGAACACAGG.......................................................................................................................................................................................................

0.33

.GCAGAACATTCAGAATCAGGTCAG.................................................................................................................................................................................................................................

0.33

..............................................................AACTGTTTGTAGAGGAAATT........................................................................................................................................................................

0.33

2.33

0.33

..CAGAACATTCAGAATCAGGTC...................................................................................................................................................................................................................................

0.33

...AGAACATTCAGAATCAGG.....................................................................................................................................................................................................................................

0.33

..................................GTGGACCTGAACACAGG.......................................................................................................................................................................................................

0.33

.........................................TGAACACAGGTAAGAGAATGCAACT........................................................................................................................................................................................

0.33

..CAGAACATTCAGAATCAGGTCAGC................................................................................................................................................................................................................................

0.33

..............................................................AACTGTTTGTAGAGGAAATTGA......................................................................................................................................................................

0.33

2.33

0.33

..CAGAACATTCAGAATCAGGTCAGCT...............................................................................................................................................................................................................................

0.33

................................GTGTGGACCTGAACACAGG.......................................................................................................................................................................................................

0.33

....................................................................................................................................................................................................ATGGGATAAAATAGGATA....................................

0.33

............................................................................................................................ATGGGGACCAAAAAAAA.............................................................................................................

0.29

0.14

..............................................................AACTGTTTGTAGAGGAA...........................................................................................................................................................................

0.25

.............................TGGGTGTGGACCTGAAC............................................................................................................................................................................................................

0.25

..............................................................AACTGTTTGTAGAGGAAGCGG.......................................................................................................................................................................

0.25

..............................................................AACTGTTTGTAGAGGAACTGA.......................................................................................................................................................................

0.25

.............................................................................................................CAGGAAAGATTCAAAATG...........................................................................................................................

0.20

..............................................................AACTGTTTGTAGAGG.............................................................................................................................................................................

0.20

............................................................................................................................ATGGGGACCAAAAAAAAAGACA........................................................................................................

0.17

1.50

0.17

............................................................................................................................ATGGGGACCAAAAAAAAAACA.........................................................................................................

0.17

1.50

0.17

................................................................CTGTTTGTAGAGGAAAAGA.......................................................................................................................................................................

0.12

................................................................CTGTTTGTAGAGGAAAA.........................................................................................................................................................................

0.12