ID: uc003tqz.2_intron_4_0_chr7_55902280_r.5p
GENE: SEPT14(5)
chr7:55910435-55910684-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(1)
AGO3.ip
(4)
B-CELL
(4)
BRAIN
(1)
BREAST
(26)
CELL-LINE
(3)
CERVIX
(2)
HEART
(3)
HELA
(3)
LIVER
(1)
OTHER
(1)
RRP40.ip
(12)
SKIN
(1)
UTERUS

Sense strand
ATTCCCTGAAGTCTCTTGATCTATTAACAATGAAGAACCTTGACAGTAAGGTATGTTTGGTAAATCTACCATCTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCACCGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCAGCTTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAG
................................................................((((((.((...........))(((((((.....))))))).....)).)))).....................................................................................................................................
............................................................61............................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
GSM956925PAZD5SRR040008(GSM532893)
G727N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040010(GSM532895)
G529N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.................................................................CTACCATCTTTTTTTTTTTTTG...................................................................................................................................................................2234.000.00--16.0010.007.00-1.00---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTTTG....................................................................................................................................................................2114.000.00--6.005.002.00-1.00---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTG......................................................................................................................................................................1914.000.00--8.003.001.00-2.00---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTTG.....................................................................................................................................................................20212.0012.00--3.504.003.50-1.00---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTG.......................................................................................................................................................................1810.000.00--2.003.003.00-2.00---------------------------------------------------------
.................................................................................................................................................................................................TGGGACTACAGGCACCTG.......................................1805.005.00-----3.00-2.00--------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCGGCC.........................255.000.005.00---------------------------------------------------------------
........................................................................................................................................................................................................................ACGCCCGGCTAATTTTTTTGTATCTAT.......274.000.004.00---------------------------------------------------------------
.................................................................................................................................................................................................................TGCCACCACGCCCGGCTAAGCCT..................234.000.00-3.00------1.00-------------------------------------------------------
......................................................................ATCTTTTTTTTTTTGAGCGG................................................................................................................................................................203.000.003.00---------------------------------------------------------------
.................................................................................................CCTCTGTCGCCCAGGCTGGAGT...................................................................................................................................2202.002.00----------------------2.00-----------------------------------------
...............................................................................................TCCCTCTGTCGCCCAGGCTGGAGTGCAGTGCACA.........................................................................................................................342.000.00----------2.00-----------------------------------------------------
........................................................................................................................................................................................................................ACGCCCGGCTAATTTTTTTGTATTTCTAA.....292.000.001.001.00--------------------------------------------------------------
..................................................................................................................................................................................................GGGACTACAGGCACCTGC......................................1802.002.00-----2.00----------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTATTCG...................312.000.002.00---------------------------------------------------------------
...................................................................ACCATCTTTTTTTTTTTG.....................................................................................................................................................................1891.671.67--0.110.330.78-0.44---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTATTT...................................................................................................................................................................221.000.00--1.00-------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTGACG....................301.000.001.00---------------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTTTTCG..................................................................................................................................................................231.000.00------1.00---------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTGG.....................................................................................................................................................................201.000.00--1.00-------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGGC........................261.000.001.00---------------------------------------------------------------
..........................................................................................................................................................................................................AGGCACCTGCCACCACGCCCGGCGG.......................251.000.00-1.00--------------------------------------------------------------
..................................................................................................................................ATCTCACCGCAAGCTCCGCCTCCTG...............................................................................................251.000.001.00---------------------------------------------------------------
................................................................................................................................................TCCGCCTCCCAGGTTCACGCCTGTC.................................................................................251.000.00----------1.00-----------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTAGCCT...................311.000.00-1.00--------------------------------------------------------------
.......................................................................................................................................................................................................TACAGGCACCTGCCACCACGCCC............................2301.001.00----------------1.00-----------------------------------------------
...................................................................ACCATCTTTTTTTTTTATG....................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------
.............................................................................................................................................................TTCACGCCATTCTCCAGCTTCAGCCTCCAG...............................................................301.000.001.00---------------------------------------------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGA............................................................................................211.000.001.00---------------------------------------------------------------
................................................................................................................................................................................................CTGGGACTACAGGCACCTGCCACC..................................2401.001.00-----------------1.00----------------------------------------------
................................................................................................................................................................................................CTGGGACTACAGGCACCTG.......................................1901.001.00-----1.00----------------------------------------------------------
..............................................................................................................................................................................................................ACCTGCCACCACGCCCGGCTAATTTTCCG...............291.000.00--------1.00-------------------------------------------------------
..............................................................................................CTCCCTCTGTCGCCCATCT.........................................................................................................................................191.000.00-------------------------------------------1.00--------------------
...................................................................ACCATCTTTTTTTTTTTCAC...................................................................................................................................................................201.000.00------1.00---------------------------------------------------------
....................................................................................................................................................CCTCCCAGGTTCACGCCATTCTCCCCA...........................................................................271.000.00--------------------------------------------------1.00-------------
..................................................................................................................................................................................................GGGACTACAGGCACCTGACG....................................2001.001.00-----------------------------------------------1.00----------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCGCC..........................241.000.001.00---------------------------------------------------------------
............................................................................................................................................AAGCTCCGCCTCCCAGGTTCACGCCCCCC.................................................................................291.000.001.00---------------------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCAGGGTC..........................................................................................251.000.001.00---------------------------------------------------------------
.................................................................................................................................................................................................................TGCCACCACGCCCGGCTAATTTCTC................251.000.00-1.00--------------------------------------------------------------
........................................................................................................................................................................................................................ACGCCCGGCTAATTTTTTTGTATCTC........261.000.001.00---------------------------------------------------------------
.......................................................................................................................GCAGTGGTGCGATCTCAC.................................................................................................................1801.001.00-------1.00--------------------------------------------------------
...................................................................................................................................TCTCACCGCAAGCTCCGCCTCCCTGG.............................................................................................261.000.001.00---------------------------------------------------------------
...............................................................................................................................................................................................................CCTGCCACCACGCCCGGCTAATTCC..................251.000.00--------1.00-------------------------------------------------------
...............................................................................................................................................................................................................CCTGCCACCACGCCCGGCTAACTCT..................251.000.00--------1.00-------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTTTGG...................................................................................................................................................................221.000.00---1.00------------------------------------------------------------
...................................................................ACCATCTTTTTTTTTTTCCG...................................................................................................................................................................201.000.00--1.00-------------------------------------------------------------
.....................................................................CATCTTTTTTTTTTTGTGCT.................................................................................................................................................................201.000.00---1.00------------------------------------------------------------
............................................................................................................................................................................................GTAGCTGGGACTACAGGCACCTGCCTG...................................271.000.00------------1.00---------------------------------------------------
..........................................................................................................................................................................................................AGGCACCTGCCACCACGCCCGGCTACTC....................281.000.00--------1.00-------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTAAGCT...................311.000.00-1.00--------------------------------------------------------------
.......................................................................TCTTTTTTTTTTTGAGACGGAGTCCCCT.......................................................................................................................................................281.000.00-1.00--------------------------------------------------------------
.................................................................CTACCATCTTTTTTTTCCTG.....................................................................................................................................................................201.000.00----1.00-----------------------------------------------------------
..........................................................................................................................................................................................................AGGCACCTGCCACCACGCCCGGCTTTTG....................281.000.001.00---------------------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCAGCTTC..........................................................................................251.000.001.00---------------------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCAGCG............................................................................................231.000.001.00---------------------------------------------------------------
.................................................................................................................................................................................................TGGGACTACAGGCACCTGCCACCACGCCTGCC.........................321.000.001.00---------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTAATAC...................311.000.001.00---------------------------------------------------------------
...............................................................................................................................................CTCCGCCTCCCAGGTTCACGCCATTCCTTG.............................................................................301.000.00--------1.00-------------------------------------------------------
...................................................................................................................................TCTCACCGCAAGCTCCGCCTCCCAGG.............................................................................................2621.001.001.00---------------------------------------------------------------
.........................................................................................................................AGTGGTGCGATCTCATGGC..............................................................................................................191.000.00---------------------------------------1.00------------------------
................................................................................................................................................................................................CTGGGACTACAGGCACCTGGCGG...................................2301.001.001.00---------------------------------------------------------------
........................................................................................................................................CCGCAAGCTCCGCCTCCCAGCTC...........................................................................................231.000.001.00---------------------------------------------------------------
..................................................................................................................................ATCTCACCGCAAGCTCCGCCTCCCGGG.............................................................................................271.000.001.00---------------------------------------------------------------
........................................................................CTTTTTTTTTTTGAGACGGAGTGGG.........................................................................................................................................................251.000.00-1.00--------------------------------------------------------------
..........................................................................................................................................................................................................AGGCACCTGCCACCACGCCCGGCTTTG.....................271.000.001.00---------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTAACTTC..................321.000.00-1.00--------------------------------------------------------------
.................................................................................................................................................................................................TGGGACTACAGGCACCTGCCAAGA.................................241.000.00------------1.00---------------------------------------------------
.................................................................CTACCATCTTTTTTTTTGGG.....................................................................................................................................................................201.000.00--1.00-------------------------------------------------------------
................................................................................................CCCTCTGTCGCCCAGGCTGGACTTG.................................................................................................................................251.000.00----------1.00-----------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCAGGGC...........................................................................................241.000.001.00---------------------------------------------------------------
.................................................................CTACCATCTTTTTTTCTTG......................................................................................................................................................................191.000.00----1.00-----------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCCCTC.....................291.000.00-1.00--------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTGAC.....................291.000.001.00---------------------------------------------------------------
.......................................................................................................................................................................................................TACAGGCACCTGCCACCACGCCGGCC.........................261.000.00-1.00--------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGGCA.......................271.000.001.00---------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGGCTAATCG...................311.000.001.00---------------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTTCT.....................................................................................................................................................................201.000.00--------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................CCCGGCTAATTTTTTTCCGT...........201.000.00--------1.00-------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCAGC...........................231.000.00-1.00--------------------------------------------------------------
..................................................................................................................................................................................................GGGACTACAGGCACCTG.......................................1701.001.00-------------------------1.00--------------------------------------
.....................................................................................AGACGGAGTCTCCCTCTGTCGCCCAGGCTGGT.....................................................................................................................................321.000.00-1.00--------------------------------------------------------------
.............................ATGAAGAACCTTGACA.............................................................................................................................................................................................................1631.001.00------------------------------------------------------------0.330.33-0.33
................................................................................................................................................................................................................................CTAATTTTTTTGTATTCAG.......191.000.00------------1.00---------------------------------------------------
.....................................................................................................................................................................ATTCTCCAGCTTCAGCCTCCCGAGTAGCTGGCA....................................................331.000.001.00---------------------------------------------------------------
............................................................................................................................................................................................................GCACCTGCCACCACGCCCGGATC.......................231.000.00----------------------------1.00-----------------------------------
.................................................................................................................................................................................................................TGCCACCACGCCCGGCTAATTTTTTCGG.............281.000.001.00---------------------------------------------------------------
...............................................................................................................................................................................................................CCTGCCACCACGCCCGGCTAATTTTTTTCTG............311.000.00----------------------------------------------1.00-----------------
...........................................................................TTTTTTTTTGAGACGGAGTCTCCCCTC....................................................................................................................................................271.000.00-1.00--------------------------------------------------------------
..........................................................................................................................................................................................................AGGCACCTGCCACCACGCCCGGCTAGTTC...................291.000.001.00---------------------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCAGGTTCACGCCC....................................................................................311.000.001.00---------------------------------------------------------------
.....................................................................CATCTTTTTTTTTTTGTAAG.................................................................................................................................................................201.000.00------1.00---------------------------------------------------------
...............................................................................................................................................................................................GCTGGGACTACAGGCACCTGC......................................2101.001.00---------1.00------------------------------------------------------
.........................................................................................................................................................................................CGAGTAGCTGGGACTACAGGCACTAT.......................................261.000.00----------1.00-----------------------------------------------------
..................................................................................................................................ATCTCACCGCAAGCTCCGCCTCCCGG..............................................................................................261.000.001.00---------------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTCG......................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------
.......................................................................................................................................ACCGCAAGCTCCGCCTCCCACGCC...........................................................................................241.000.001.00---------------------------------------------------------------
........................................................................................................................................................................................................ACAGGCACCTGCCACCACGCCCGCCG........................261.000.001.00---------------------------------------------------------------
.................................................................................................................................................................................................................TGCCACCACGCCCGGCTAACTCC..................231.000.00--------1.00-------------------------------------------------------
.................................................................CTACCATCTTTTTTTTTCTTG....................................................................................................................................................................211.000.00---1.00------------------------------------------------------------
.........................................................................................................................................................................................CGAGTAGCTGGGACTACAGGCACCTGC......................................2701.001.00-------1.00--------------------------------------------------------
...............................................................................................TCCCTCTGTCGCCCATCT.........................................................................................................................................181.000.00----------1.00-----------------------------------------------------
..................................................................TACCATCTTTTTTTTTTTG.....................................................................................................................................................................1940.500.50---0.50------------------------------------------------------------
...................................................................................................................................TCTCACCGCAAGCTCCGCCTCCCAGGTTCACGC......................................................................................3320.500.500.50---------------------------------------------------------------
................................................................................................................................................................ACGCCATTCTCCAGCTTC........................................................................1830.330.33--------------------------------------------------------------0.33-
...................................................................ACCATCTTTTTTTTTTTGAGA..................................................................................................................................................................2160.170.170.17---------------------------------------------------------------
...................................................................ACCATCTTTTTTTTTTTGG....................................................................................................................................................................1990.111.67---0.11------------------------------------------------------------
................................................................TCTACCATCTTTTTTTTTT.......................................................................................................................................................................1990.110.110.11---------------------------------------------------------------

Antisense strand
ATTCCCTGAAGTCTCTTGATCTATTAACAATGAAGAACCTTGACAGTAAGGTATGTTTGGTAAATCTACCATCTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCACCGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCAGCTTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAG
................................................................((((((.((...........))(((((((.....))))))).....)).)))).....................................................................................................................................
............................................................61............................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
GSM956925PAZD5SRR040008(GSM532893)
G727N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040010(GSM532895)
G529N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTTCACGCCAAG.................................................................................. 313.000.003.00---------------------------------------------------------------
.........................................................................................GGGCGACAGAGGGAGACTCC............................................................................................................................................. 2002.002.00-------2.00--------------------------------------------------------
..................................................................................................................................................CGCCTCCCAGGTTCACGCCATTTAA............................................................................... 252.000.00-----------------------2.00----------------------------------------
............................................................................................GTCTCCCTCTGTCGCCCAGGA......................................................................................................................................... 212.000.00-------------2.00--------------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCCGC....................................................................................... 212.000.00-2.00--------------------------------------------------------------
......................................................................................................................................CACCGCAAGCTCCGCCTCCCAC.............................................................................................. 222.000.00-------------------2.00--------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTGCGG........................................................................................ 212.000.00-2.00--------------------------------------------------------------
.................................................................................................................................................TGGCGTGAACCTGGGAGGCGG.................................................................................... 2102.002.00---------1.00----1.00-------------------------------------------------
................................................................................................................................................CGTGAACCTGGGAGGCGGA....................................................................................... 1901.001.00-------1.00--------------------------------------------------------
........................................................................................................................................................................CTCCAGCTTCAGCCTCCCGGACC........................................................... 231.000.00-1.00--------------------------------------------------------------
.................................................................................................................................................CCGCCTCCCAGGTTCACGCCACGCC................................................................................ 251.000.001.00---------------------------------------------------------------
............................................................................................................................................................................................GTAGCTGGGACTACAGGCACCTGCCCC................................... 271.000.00-1.00--------------------------------------------------------------
......................................................................................................................................................................TTCTCCAGCTTCAGCCTCCGC............................................................... 211.000.00-1.00--------------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCACGCCACGCG................................................................................ 291.000.001.00---------------------------------------------------------------
............................................................................................................................................................................................................GCACCTGCCACCACGCCCGGCTACG..................... 251.000.001.00---------------------------------------------------------------
...............................................................................................................................................ATGGCGTGAACCTGGGAGGCGGAG................................................................................... 2401.001.00-----1.00----------------------------------------------------------
..........................................................................................................................................GCAAGCTCCGCCTCCCAGGTTCCCC....................................................................................... 251.000.00-1.00--------------------------------------------------------------
............................................................................................................................................................................................................GCACCTGCCACCACGCCCGGCTACGT.................... 261.000.001.00---------------------------------------------------------------
.............................................................................................................................................................................CAGCTACTCGGGAGGCTGAAGC....................................................... 2201.001.00-----------1.00----------------------------------------------------
..............................................................................................................................................................................................................ACCTGCCACCACGCCCGGCTAATTCCGT................ 281.000.00-1.00--------------------------------------------------------------
.............................................................................................................................................................TTCACGCCATTCTCCATTTT......................................................................... 201.000.00---------------------------------------------------1.00------------
.................................................................................................................................................CCGCCTCCCAGGTTCACGCCATTTAA............................................................................... 261.000.00---------------------------------------------------------1.00------
..............................................................................................CTCCCTCTGTCGCCCATA.......................................................................................................................................... 181.000.00----------------------------------1.00-----------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTTAGTC....................................................................................... 261.000.00-1.00--------------------------------------------------------------
...........................................................................................................................................CAAGCTCCGCCTCCCAGGTTGAGA....................................................................................... 241.000.00---------------------------1.00------------------------------------
............................................................................................................................................................................................................CCGGGCGTGGTGGCAGGTGC.......................... 2001.001.00-------------------------1.00--------------------------------------
............................................................................................................................................................................................................GCACCTGCCACCACGCCCGGCTTCG..................... 251.000.001.00---------------------------------------------------------------
............................................................................................................................................................................................................CGGGCGTGGTGGCAGGTGC........................... 1901.001.00-----------1.00----------------------------------------------------
..........................................................................................................................................GCAAGCTCCGCCTCCCAGGTTTGCG....................................................................................... 251.000.00-1.00--------------------------------------------------------------
.............................................................................................................................................................................GCTTCAGCCTCCCGAGTAGCTGGGAG................................................... 261.000.00-----------1.00----------------------------------------------------
...................................................................................................................................................................................GCCTCCCGAGTAGCTGGGACTACAGGCACGGA....................................... 321.000.00---------1.00------------------------------------------------------
................................................................................................................................................GCGTGAACCTGGGAGGCGGA...................................................................................... 2001.001.00---------1.00------------------------------------------------------
........................................................................................................................................................CCAGGTTCACGCCATTCTTTTT............................................................................ 221.000.00------------------------------1.00---------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGGAG.......................................................................................... 191.000.00----------------------------------------1.00-----------------------
...............................................................................................TCCCTCTGTCGCCCAGGCTGA...................................................................................................................................... 211.000.00-------------1.00--------------------------------------------------
............................................................................................................................................................................GCTACTCGGGAGGCTGAAGCT......................................................... 2101.001.00--------------1.00-------------------------------------------------
...............................................................................................................................................................................................GCTGGGACTACAGGCACCTACTC.................................... 231.000.001.00---------------------------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACGCCACCGC................................................................................ 281.000.00-1.00--------------------------------------------------------------
................................................................................................................................................................................................CTGGGACTACAGGCACCTGCCAGA.................................. 241.000.00------------------------------------1.00---------------------------
.................................................................................................................................................GGCGTGAACCTGGGAGGCGG..................................................................................... 2001.001.00-----1.00----------------------------------------------------------
...............................................................................................................................................................................CCCAGCTACTCGGGAGGCTGAA..................................................... 2201.001.00------------------1.00---------------------------------------------
..........................................................................................GAGTCTCCCTCTGTCGCCCAGGGACG...................................................................................................................................... 261.000.00-1.00--------------------------------------------------------------
......................................................................................................................................GAGGCGGAGCTTGCGGTG.................................................................................................. 1801.001.00--------------1.00-------------------------------------------------
..................................................................................................................................................CGTGAACCTGGGAGGCG....................................................................................... 1701.001.00-----1.00----------------------------------------------------------
.........................................................................................................................................................................TCCAGCTTCAGCCTCCATAC............................................................. 201.000.00---------------------------------1.00------------------------------
........................................................................................................................................................................................CCGAGTAGCTGGGACTACAGC............................................. 211.000.00----------------1.00-----------------------------------------------
.........................................................................................GGAGTCTCCCTCTGTCGCCCAGGCTGGAGTTC................................................................................................................................. 321.000.00-1.00--------------------------------------------------------------
...........................................................................................................................................................................................................GGCACCTGCCACCACGCCCGGCTAT...................... 251.000.001.00---------------------------------------------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAAGC............................................................................................ 211.000.00-1.00--------------------------------------------------------------
..................................................................................................................................................CGCCTCCCAGGTTCACGCCATTCAT............................................................................... 251.000.00-------------------------------1.00--------------------------------
.............................................................................................................................................................................................TAGCTGGGACTACAGGCACGAGC...................................... 231.000.00------------------------1.00---------------------------------------
.....................................................................................................................................................................................CTCCCGAGTAGCTGGGACTACAGGCACGC........................................ 291.000.00-------------------------------------------------------1.00--------
.....................................................................................................................................................................................................TGGTGGCAGGTGCCTGTAGT................................. 2001.001.00--------------------1.00-------------------------------------------
........................................................................................................................................................................CTCCAGCTTCAGCCTCCCGAGACC.......................................................... 241.000.001.00---------------------------------------------------------------
....................................................................................................................................GCGGAGCTTGCGGTGAG..................................................................................................... 1701.001.00-----1.00----------------------------------------------------------
...........................................................................................................................................................................................................GGCACCTGCCACCACGCCCGGCTAACGC................... 281.000.001.00---------------------------------------------------------------
..........................................................................................................................................GCAAGCTCCGCCTCCCAGGTTCGC........................................................................................ 241.000.00-1.00--------------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCACGCCATTAA................................................................................ 291.000.00----------------------------------------------------1.00-----------
...............................................................................................................................................................................................GCTGGGACTACAGGCACCTGACTC................................... 241.000.00--------1.00-------------------------------------------------------
.............................................................................................................................................CGTGAACCTGGGAGGCGGAGCT....................................................................................... 2201.001.00-------1.00--------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCCGG....................................................................................... 221.000.001.00---------------------------------------------------------------
...............................................................................................................................................................................TCCCAGCTACTCGGGAGGCTGAA.................................................... 2301.001.00-----------1.00----------------------------------------------------
................................................................................................................................................TCCGCCTCCCAGGTTCACGCTCA................................................................................... 231.000.00----------------------------------------------------------1.00-----
................................................................................................................................................GGCGTGAACCTGGGAGGCGGA..................................................................................... 2101.001.00--------------------------1.00-------------------------------------
......................................................................................................................................CACCGCAAGCTCCGCCTGGCG............................................................................................... 211.000.00---------------1.00------------------------------------------------
..........................................................................................GAGTCTCCCTCTGTCGCCCAAGGC........................................................................................................................................ 241.000.001.00---------------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCAGCGG..................................................................................... 241.000.001.00---------------------------------------------------------------
...............................................................................................................................................TGGCGTGAACCTGGGAGGCGGAG.................................................................................... 2301.001.00------------------1.00---------------------------------------------
...............................................................................................................................................CGTGAACCTGGGAGGCGGAG....................................................................................... 2001.001.00------------------1.00---------------------------------------------
.................................................................................................................................................CCGCCTCCCAGGTTCACGCCATTCGCC.............................................................................. 271.000.001.00---------------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTGCG......................................................................................... 201.000.00-1.00--------------------------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACTCC..................................................................................... 231.000.00-1.00--------------------------------------------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTTCAAGC...................................................................................... 271.000.001.00---------------------------------------------------------------
..........................................................................................................................................GCAAGCTCCGCCTCCCAGGTTCACGC...................................................................................... 261.000.00---------1.00------------------------------------------------------
.........................................................................................................................................................................................................................CGCCCGGCTAATTTTTTTGAA............ 211.000.00---------------------------------------------1.00------------------
..................................................................................................................................................................................................GGGACTACAGGCACCTGTCTG................................... 2101.000.00-------------------------------------1.00--------------------------
..............................................................................................................................................................................CCCAGCTACTCGGGAGGCTGAAG..................................................... 2301.001.00--------------------1.00-------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACAA...................................................................................... 221.000.00--------------------------------------------------------1.00-------
..............................................................................................................................................................................................................ACCTGCCACCACGCCCGGCTAATTTGCT................ 281.000.00-1.00--------------------------------------------------------------
..................................................................................................................................................................................................GTGGTGGCAGGTGCCTGTAGTCCC................................ 2401.001.00---------1.00------------------------------------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTTCAAGCC..................................................................................... 281.000.00-1.00--------------------------------------------------------------
...................................................................................TGAGACGGAGTCTCCCTCTGTCAG............................................................................................................................................... 241.000.00----1.00-----------------------------------------------------------
.................................................................................................................................................CCGCCTCCCAGGTTCACGCGGG................................................................................... 221.000.00---------------------1.00------------------------------------------
....................................................................................................................................................................................................GACTACAGGCACCTGCCACCACGTCTG........................... 271.000.00------------------------------------------------1.00---------------
.....................................................................................................................................................................................................ACTACAGGCACCTGCT..................................... 161.000.00-------1.00--------------------------------------------------------
...................................................................................................................................................................................................GGACTACAGGCACCTGCCACCACGCCCTCTG........................ 311.000.00------------------------1.00---------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTGCGG....................................................................................... 221.000.001.00---------------------------------------------------------------
............................................................................................GTCTCCCTCTGTCGCCCAGA.......................................................................................................................................... 201.000.00--------------------------1.00-------------------------------------
..............................................................................................CTCCCTCTGTCGCCCAGGCTGGACG................................................................................................................................... 251.000.00-1.00--------------------------------------------------------------
........................................................................................................................................................CCAGGTTCACGCCATTCTTTT............................................................................. 211.000.00-----------------------------1.00----------------------------------
.......................................................................................................................................................................................CCCGAGTAGCTGGGACTACCCG............................................. 221.000.00-----------------------------------------1.00----------------------
.................................................................................................................................................GCGTGAACCTGGGAGGCGG...................................................................................... 1901.001.00----------------1.00-----------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCACGCCACC.................................................................................. 271.000.001.00---------------------------------------------------------------
................................................................................................................................................TCCGCCTCCCAGGTTCACTTAA.................................................................................... 221.000.00------------------------------------------1.00---------------------
.............................................................................................TCTCCCTCTGTCGCCCAGAGCC....................................................................................................................................... 221.000.00--------------------------------------1.00-------------------------
...................................................................................................................................................................................................................CCACCACGCCCGGCTAATAAGT................. 221.000.00-1.00--------------------------------------------------------------
..........................................................................................................................................ATGGCGTGAACCTGGGAGGCGGAGCTTGC................................................................................... 2901.001.00---------1.00------------------------------------------------------
............................................................................................................................................................................................GTAGCTGGGACTACAGGCACCTGCCACCGC................................ 301.000.00-1.00--------------------------------------------------------------
...................................................................................................................................................................................GGTGCCTGTAGTCCCAGCTACTCGGGAGGC......................................... 3001.001.00-----1.00----------------------------------------------------------
.............................................................................................................................................................................................TAGCTGGGACTACAGGCACCTGCCACCAGCC.............................. 311.000.001.00---------------------------------------------------------------
.......................................................................................................................................................................................................TACAGGCACCTGCCACCACGCCCGGCTCCCC.................... 311.000.001.00---------------------------------------------------------------
............................................................................................................................................................................AGCTTCAGCCTCCCGAGTACTG........................................................ 221.000.00--------------------------------------------1.00-------------------
....................................................................................GGGCGACAGAGGGAGACTCCGTCTC............................................................................................................................................. 2501.001.00-----------------1.00----------------------------------------------
.................................................................................................CCTCTGTCGCCCAGGCTTCTG.................................................................................................................................... 211.000.00-----------------------------------------------------1.00----------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTAGCC........................................................................................ 251.000.001.00---------------------------------------------------------------
.............................................................................................................................................................................GCTTCAGCCTCCCGAGTGATC........................................................ 211.000.00----------------------------1.00-----------------------------------
.........................................................................................................................................CGCAAGCTCCGCCTCCCAGGTAG.......................................................................................... 231.000.00-1.00--------------------------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACTT...................................................................................... 221.000.00-1.00--------------------------------------------------------------
..............................................................................................................................................................................................................ACCTGCCACCACGCCCGGCTCCTG.................... 241.000.001.00---------------------------------------------------------------
...........................................................................................................................................TGGCGTGAACCTGGGAGGCGGAGCTTG.................................................................................... 2701.001.00-------1.00--------------------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCAAA....................................................................................... 211.000.00-1.00--------------------------------------------------------------
.........................................................................................GGAGTCTCCCTCTGTCGCCCAGGCTGGATCC.................................................................................................................................. 311.000.001.00---------------------------------------------------------------
.........................................................................................GGAGTCTCCCTCTGTCGCCCAGGCTTTTC.................................................................................................................................... 291.000.001.00---------------------------------------------------------------
........................................................................................................................................................................................................................ACGCCCGGCTAATTTTTTTGAGTA.......... 241.000.00----------1.00-----------------------------------------------------
...............................................................................................................................................GAGAATGGCGTGAACCTGGGAGGCGGAG............................................................................... 2801.001.00-----------1.00----------------------------------------------------
................................................................................................................................................TGGCGTGAACCTGGGAGGCGGA.................................................................................... 2201.001.00-----------1.00----------------------------------------------------
.............................................................................................................................................................................GCTTCAGCCTCCCGAGTGGCG........................................................ 211.000.00-1.00--------------------------------------------------------------
................................................................................................................................................................................................TGGTGGCAGGTGCCTGTAGTCCCAG................................. 2501.001.00-------------------------------------------------1.00--------------
...........................................................................................................................................CAAGCTCCGCCTCCCAGGTTCACGA...................................................................................... 251.000.00-----------------1.00----------------------------------------------
..................................................................................................................................................................GCCATTCTCCAGCTTCAAG..................................................................... 191.000.00---------------1.00------------------------------------------------
...........................................................................................................................................CAAGCTCCGCCTCCCAGGTTCACGCCAGCGT................................................................................ 311.000.00-1.00--------------------------------------------------------------
.................................................................................................CCTCTGTCGCCCAGGCTCGAC.................................................................................................................................... 211.000.00-1.00--------------------------------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCACGCCATTGCGG.............................................................................. 311.000.001.00---------------------------------------------------------------
........................................................................................................................CAGTGGTGCGATCTCACCGGAC............................................................................................................ 221.000.00---------------------------1.00------------------------------------
.............................................................................................................................................AGCTCCGCCTCCCAGGTTCACGCCAGCC................................................................................. 281.000.00-1.00--------------------------------------------------------------
......................................................................................................................................CACCGCAAGCTCCGCCTT.................................................................................................. 181.000.00---------------1.00------------------------------------------------
.......................................................................................................................................................................................CCCGAGTAGCTGGGACTACACGGC........................................... 241.000.00---------1.00------------------------------------------------------
...................................................................................................................................................GCCTCCCAGGTTCACGCCATTGT................................................................................ 231.000.00-----------------------------------1.00----------------------------
....................................................................................................................................................CCTCCCAGGTTCACGCCATTGAGG.............................................................................. 241.000.00------------------------------------------------------1.00---------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACTGA..................................................................................... 231.000.00--------------------------------1.00-------------------------------
...............................................................................................................................................................................................GCTGGGACTACAGGCACGCTC...................................... 211.000.00-1.00--------------------------------------------------------------
...........................................................................................................................................CAAGCTCCGCCTCCCAGGTTCACGCCAAAAA................................................................................ 311.000.00---------------------1.00------------------------------------------
..............................................................................................................................................GCTCCGCCTCCCAGGTTCACGCCACAG................................................................................. 271.000.00-1.00--------------------------------------------------------------
...................................................................................................................................CCTGGGAGGCGGAGCTTGCGGTGAGA............................................................................................. 2620.500.50-----------------------------------------------------------0.50----
........................................................................................................................................................................AGTCCCAGCTACTCGGGAGGCTGAAGCTGGAG.................................................. 3270.140.14-0.14--------------------------------------------------------------