ID: uc003tqo.2_intron_0_0_chr7_55250171_r.5p
GENE: (1)
chr7:55256350-55256599-


(27)
B-CELL
(12)
BRAIN
(3)
BREAST
(15)
CELL-LINE
(4)
LIVER
(2)
OTHER
(1)
SKIN

Sense strand
CCAAAGGCGTGGGAAAGGGCAGAGAGCACAGGACATATTCTGGAATTCAGGTAATCAGTTGGAGGGTTTTAAGTCAGAGACAGCTTTGGGACAAGGAGAGAATCCCATGTGAACTTAGAGGAGACTTGACGCATGGGTCTCCGTCCCACTGCCGGCACATTTGAAAGGACAACTCTGTGCCTGGCGCAGTTATGCTTTAACTGGTCCCCAAAGATAAGAGCTGCGATACGGCCTGTGAGCTCCCAGGGTC
...................................................................................................((..((((((((......(((....)))..))))))))..)).((((....................))))................................................................................
...................................................................................................100.......................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
TAX577744(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
.......................................................................................................................................................CCGGCACATTTGAAATAC.................................................................................18286.002.004.506.50-6.505.007.00-7.00--4.502.501.50-1.503.001.003.001.502.501.001.002.001.501.001.500.501.001.50--1.001.001.001.00-0.501.501.001.50-0.50-1.001.000.50--1.00--1.00---0.500.500.500.50-0.500.500.500.50-
.......................................................................................................................................................CCGGCACATTTGAAATA..................................................................................17238.502.005.502.00-3.503.00-7.00-----1.50-2.00-1.00--0.502.00--1.001.00-1.50---1.50-0.500.50-1.000.50---1.00--------1.00----0.50----0.50-----
.......................................................................................................................................................CCGGCACATTTGAAATACC................................................................................19216.002.001.001.50-1.000.50------2.001.00--0.500.50-1.50--1.500.50--0.50-0.50---0.50--0.50-0.50----0.50---0.50-------0.50----------0.50
.......................................................................................................................................................CCGGCACATTTGAAA....................................................................................1522.002.00-----------------------------1.50-----0.50-----------------------------
.......................................................................................................................................................CCGGCACATTTGAAAGAC.................................................................................181.000.00-1.00---------------------------------------------------------------
........................................................................................................CCATGTGAACTTAGAGGAGACTTGA.........................................................................................................................2511.001.00--------1.00--------------------------------------------------------
..................................................................................................................TTAGAGGAGACTTGACGC......................................................................................................................1811.001.00--------1.00--------------------------------------------------------
.......................................................................................................................................................CCGGCACATTTGAAAAA..................................................................................1721.002.000.50---------------0.50------------------------------------------------
..............................................................................................................................................................ATTTGAAAGGACAACTCTGTG.......................................................................2111.001.00----------------------------------------------------1.00------------
......................................................................................................................................................................................................AACTGGTCCCCAAAGACCCG................................201.000.00--1.00--------------------------------------------------------------
..AAAGGCGTGGGAAAGGGCA.....................................................................................................................................................................................................................................1911.001.00-------------1.00---------------------------------------------------
........GTGGGAAAGGGCAGAATTG...............................................................................................................................................................................................................................191.000.00--------------------------------------------------1.00--------------
..AAAGGCGTGGGAAAGGGCAGAG..................................................................................................................................................................................................................................2211.001.00---------1.00-------------------------------------------------------
.......................................................................................GGGACAAGGAGAGAATAC.................................................................................................................................................181.000.00-------------1.00---------------------------------------------------
..........................................................................................................ATGTGAACTTAGAGGTGGA.............................................................................................................................191.000.00------------------------------------------1.00----------------------
..............................................TCAGGTAATCAGTTGAC...........................................................................................................................................................................................171.000.00----------------------------------------------1.00------------------
.......................................................................................................................................................CCGGCACATTTGAAACAC.................................................................................1820.502.00---------------------------0.50-------------------------------------
.......................................................................................................................................................CCGGCACATTTGAAAAC..................................................................................1720.502.000.50----------------------------------------------------------------
.......................................................................................................................................................CCGGCACATTTGAAATTC.................................................................................1820.502.00-0.50---------------------------------------------------------------
.......................................................................................................................................................CCGGCACATTTGAAATGCC................................................................................1920.502.00--------------------------------------0.50--------------------------

Antisense strand
CCAAAGGCGTGGGAAAGGGCAGAGAGCACAGGACATATTCTGGAATTCAGGTAATCAGTTGGAGGGTTTTAAGTCAGAGACAGCTTTGGGACAAGGAGAGAATCCCATGTGAACTTAGAGGAGACTTGACGCATGGGTCTCCGTCCCACTGCCGGCACATTTGAAAGGACAACTCTGTGCCTGGCGCAGTTATGCTTTAACTGGTCCCCAAAGATAAGAGCTGCGATACGGCCTGTGAGCTCCCAGGGTC
...................................................................................................((..((((((((......(((....)))..))))))))..)).((((....................))))................................................................................
...................................................................................................100.......................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
TAX577744(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
...................................................................................................................................................................AAAGGACAACTCTGTGTG..................................................................... 188.000.00--7.00--------------------------------------------1.00-----------------
...................................................................................................................................................................AAAGGACAACTCTGTGTC..................................................................... 182.000.00--2.00--------------------------------------------------------------
..............................................................................................................................................................................................TTGGGGACCAGTTAAAGCATA....................................... 2112.002.00---------2.00-------------------------------------------------------
..........................CACAGGACATATTCTATC.............................................................................................................................................................................................................. 181.000.00-------------1.00---------------------------------------------------
.........................................................................................................................................TCTCCGTCCCACTGCCGGCA............................................................................................. 201.000.00--------1.00--------------------------------------------------------
.........................................................................................................................................TGCCGGCAGTGGGACGGAGA............................................................................................. 2011.001.00--------1.00--------------------------------------------------------
........................................................................................................................................CGGCAGTGGGACGGAGAC................................................................................................ 1811.001.00--------1.00--------------------------------------------------------
.........................................................................................................................................GCCGGCAGTGGGACGGAGA.............................................................................................. 1911.001.00--------1.00--------------------------------------------------------
..................................................................................................................................................CTTTCAAATGTGCCGGCAGTG................................................................................... 2111.001.00---------1.00-------------------------------------------------------
........................................................................................................................................GCCGGCAGTGGGACGGAGAC.............................................................................................. 2011.001.00--------1.00--------------------------------------------------------
.......................AGAATATGTCCTGTGCTC................................................................................................................................................................................................................. 1811.001.00-------------1.00---------------------------------------------------
............................................................................CTCCTTGTCCCAAAGCTGTCTC........................................................................................................................................................ 2211.001.00---------1.00-------------------------------------------------------
...................................................................................................................................................................AAAGGACAACTCTGTGCTG.................................................................... 191.000.00--1.00--------------------------------------------------------------