ID: uc003tqh.2_intron_2_0_chr7_55211182_f.3p
GENE: (3)
chr7:55214099-55214348+


(3)
BREAST 		(2)
CELL-LINE 		(1)
CERVIX 		(3)
LIVER 		(2)
OTHER 		(6)
SKIN

Sense strand
AAAACCCTAGCTCCTCCATGGCACCATCATTAACAATTTTATCTGGCCGCCCCCCGGGAAGTTCACTGGGCTAATTGCGGGACTCTTGTTCGCACCATGGCATCTCTTTAGCAGAACATAAATGCGAAGAGCACATGCATCCTTCATGGGAATTTAAAGGAGCTGGAAAGAGTGCTCACCGCAGTTCCATTCTCCCGCAGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAAC
................................................................................................................((((......((((..((((((.....((((....))))...........((....)).))))))..))))......)))).........................................................
.......................................................................................................104........................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040029(GSM532914)
G026T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
............................................................................................................TAGCAGAACATAAATATTG...........................................................................................................................1998.000.0094.002.00----1.001.00---------
............................................................................................................TAGCAGAACATAAATATTA...........................................................................................................................1911.000.0011.00----------------
............................................................................................................TAGCAGAACATAAATATCG...........................................................................................................................198.000.005.003.00---------------
............................................................................................................TAGCAGAACATAAATAATG...........................................................................................................................198.000.007.001.00---------------
............................................................................................................TAGCAGAACATAAATACTG...........................................................................................................................197.000.006.001.00---------------
............................................................................................................TAGCAGAACATAAATTTTG...........................................................................................................................194.000.003.001.00---------------
............................................................................................................TAGCAGAACATAAATATT............................................................................................................................182.000.002.00----------------
............................................................................................................TAGCAGAACATAAATGTTG...........................................................................................................................192.000.002.00----------------
............................................................................................................TAGCAGAACATAAATTTTA...........................................................................................................................192.000.002.00----------------
............................................................................................................TAGCAGAACATAAATGTCG...........................................................................................................................192.000.001.001.00---------------
............................................................................................................TAGCAGAACATAAATATGG...........................................................................................................................192.000.002.00----------------
............................................................................................................TAGCAGAACATAAATATTT...........................................................................................................................192.000.002.00----------------
............................................................................................................TAGCAGAACATAAATACAG...........................................................................................................................191.000.001.00----------------
....................................................................................................................................................................................................................................CAACAACCCTGCCCTGT.....1711.001.00----------1.00------
...................................................................................................................................................................................................................................GCAACAACCCTGCCCTGTGCA..2111.001.00------------1.00----
............................................................................................................TAGCAGAACATAAATATCA...........................................................................................................................191.000.001.00----------------
.......TAGCTCCTCCATGGCACCATA..............................................................................................................................................................................................................................211.000.00--1.00--------------
........................................ATCTGGCCGCCCCCCGGCCT..............................................................................................................................................................................................201.000.00-----1.00-----------
............................................................................................................TAGCAGAACATAAATTCTG...........................................................................................................................191.000.001.00----------------
............................................................................................................TAGCAGAACATAAATATG............................................................................................................................181.000.001.00----------------
............................................................................................................TAGCAGAACATAAATGCTG...........................................................................................................................191.000.00-1.00---------------
..............................................................................................................................................................................CTCACCGCAGTTCCATT...........................................................1711.001.00---1.00-------------
.........................................................................ATTGCGGGACTCTTGTTCGCACC..........................................................................................................................................................2311.001.00--1.00--------------
............................................................................................................TAGCAGAACATAAATTTTT...........................................................................................................................191.000.001.00----------------
...............................................................................................................................................................................................................................TTCAGCAACAACCCTGCCCTGTGCAA.2611.001.00----1.00------------
............................................................................................................TAGCAGAACATAAATAGAG...........................................................................................................................191.000.00-1.00---------------
.................................................................................................................GAACATAAATGCGAAG.........................................................................................................................1611.001.00---------1.00-------
............................................................................................................TAGCAGAACATAAATAGAA...........................................................................................................................191.000.001.00----------------
............................................GGCCGCCCCCCGGGA...............................................................................................................................................................................................1550.400.40-------------0.20-0.20-
............................................GGCCGCCCCCCGGGAGC.............................................................................................................................................................................................1750.200.40--------------0.20--
............................................GGCCGCCCCCCGGGAG..............................................................................................................................................................................................1650.200.40----------------0.20

Antisense strand
AAAACCCTAGCTCCTCCATGGCACCATCATTAACAATTTTATCTGGCCGCCCCCCGGGAAGTTCACTGGGCTAATTGCGGGACTCTTGTTCGCACCATGGCATCTCTTTAGCAGAACATAAATGCGAAGAGCACATGCATCCTTCATGGGAATTTAAAGGAGCTGGAAAGAGTGCTCACCGCAGTTCCATTCTCCCGCAGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAAC
................................................................................................................((((......((((..((((((.....((((....))))...........((....)).))))))..))))......)))).........................................................
.......................................................................................................104........................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040029(GSM532914)
G026T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
......................................................................................................................................................................................AGTTCCATTCTCCCGCTG.................................................. 181.000.00---1.00-------------
.......................................................................................................................................TGCATCCTTCATGGGAATG................................................................................................ 191.000.00--------1.00--------
...............CCATGGCACCATCATTTTT........................................................................................................................................................................................................................ 191.000.00-----------1.00-----