ID: uc003tph.3_intron_6_0_chr7_50680537_r.3p
GENE: GRB10(9)
chr7:50680487-50680736-


(11)
BREAST
(7)
CELL-LINE
(2)
HEART
(1)
HELA
(1)
KIDNEY
(2)
LIVER
(2)
OTHER
(11)
SKIN
(1)
TESTES

Sense strand
GTAGGCACTTAATAAAGTCTTGTCAGGAAGGTGGATGAATGAACGCTTAACACACAGGTGTGTGTGTATCTGCTGTGCTCCTTGCTAGGGGGATCTCCAGCTGGTTGTCTCTGGTTTGTGTCAGATGCAGCCCTGCCTTGACAGAAGCTGTTTCTGACTCCCTGTGTAACACTAACAGGACTTTCTTTTACCTCCTGTAGCCAAACAAAGTCAGGAATGAAACTAAAGAGCTGAGGTTGCTCTGTGCAGA
.............................................................................................................................................((((((...))))))....(((((.........))))).......................................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
TAX577738(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
..............................................................................................................................................................................ACAGGACTTTCTTTTACAGA........................................................2033.000.0019.008.001.003.00-----1.00-----------------1.00----------
...............................................................................................................................................................................CAGGACTTTCTTTTACAGA........................................................1933.000.0020.007.003.001.00-----1.00--------------------1.00-------
...............................................................................................................................................................................CAGGACTTTCTTTTACAG.........................................................188.000.006.002.00------------------------------------
.............................................................................................................................................CAGAAGCTGTTTCTGAGC...........................................................................................187.000.00----2.001.00------1.001.00-------1.00----1.00-----------
..............................................................................................................................................................................ACAGGACTTTCTTTTACA..........................................................186.000.006.00-------------------------------------
..............................................................................................................................................................................ACAGGACTTTCTTTTACAG.........................................................194.000.003.001.00------------------------------------
..............................................................................................................................................................................ACAGGACTTTCTTTTACAGAA.......................................................214.000.004.00-------------------------------------
................................................................................................................................................................................AGGACTTTCTTTTACAGA........................................................183.000.003.00-------------------------------------
.............................................................................................................................................................................AACAGGACTTTCTTTTACAGA........................................................213.000.001.002.00------------------------------------
..............................................................................................................................................AGAAGCTGTTTCTGAGC...........................................................................................173.000.00----1.00---------1.00----------1.00------------
...........................................................................................................................................................................................................................AAACTAAAGAGCTGAGGTTGCT.........2212.002.00----------2.00---------------------------
...............................................................................................................................................................................CAGGACTTTCTTTTACAGAA.......................................................202.000.002.00-------------------------------------
.............................................................................................................................................................................AACAGGACTTTCTTTTACA..........................................................192.000.002.00-------------------------------------
................................................................................................................................................................................................................AGTCAGGAATGAAACTAAAGAGC...................2312.002.00-------2.00------------------------------
..........................................................................................................................................................................................................AAACAAAGTCAGGAATGAAACTAAAGAGCTTAGT..............341.000.00------1.00-------------------------------
...................................................................................................................................................................GTGTAACACTAACAGGACTTTCT................................................................2311.001.00--------------------------------1.00-----
......................................................................................AGGGGGATCTCCAGCTGGTTGT..............................................................................................................................................2211.001.00--------1.00-----------------------------
..............................................................................................................................................................................ACAGGACTTTCTTTTACAGC........................................................201.000.001.00-------------------------------------
......................TCAGGAAGGTGGATGTT...................................................................................................................................................................................................................171.000.00----------------------1.00---------------
..............................................................................................................................................AGAAGCTGTTTCTGAGCTA.........................................................................................191.000.00-------------------------------1.00------
................................................................................................................................................................................AGGACTTTCTTTTACCTG........................................................181.000.00------------------------1.00-------------
..............................................................................................................................................AGAAGCTGTTTCTGAGCTG.........................................................................................191.000.00-----1.00--------------------------------
........................................................................................................................................................................................................................ATGAAACTAAAGAGCTGAGGTTGCT.........2511.001.00--------1.00-----------------------------
....................................................................................................................................................................................................................................AGCTGAGGTTGCTCTGGACA..201.000.00----------------------------------1.00---
.....................................................................................................................................................................................................................GGAATGAAACTAAAGAGCTGAGGA.............241.000.00---------------------------------1.00----
.............................................................................................................................................CAGAAGCTGTTTCTGAGCTG.........................................................................................201.000.00----------------1.00---------------------
.......................................................................................................GTTGTCTCTGGTTTGCTCT................................................................................................................................191.000.00----------------------------1.00---------
.......................................................................................................................................................................AACACTAACAGGACTTTCTTTTACC..........................................................2511.001.00-------------------1.00------------------
....................................................................................................................................................................................................................AGGAATGAAACTAAAGAGCTGAGGT.............2511.001.00---------------1.00----------------------
..............................................................................................................................................AGAAGCTGTTTCTGAGCT..........................................................................................181.000.00-----1.00--------------------------------
....................................................................................................................................................................................................................................AGCTGAGGTTGCTCTGTG....1811.001.00-----------1.00--------------------------
...................................................................................................................................................................................................................................GAGCTGAGGTTGCTCTGTG....1911.001.00------------------1.00-------------------
................................................................................................................................................................................AGGACTTTCTTTTACAG.........................................................171.000.001.00-------------------------------------
......................................................................................................................................................................................................AGCCAAACAAAGTCAGGAATGAAACTAAAGAGC...................3311.001.00------1.00-------------------------------
.................................................................................................................................................................................................................GTCAGGAATGAAACTAAAGAGCTGAGG..............2711.001.00-----------------1.00--------------------
..........................................................................................................................................................................................................AAACAAAGTCAGGAATGTT.............................191.000.00--------------------1.00-----------------
........................................................................................................................TCAGATGCAGCCCTGCCGC...............................................................................................................191.000.00-----------------------------------1.00--
...................................................................................................................................................................................................TGTAGCCAAACAAAGTCAGGAATGAAA............................2711.001.00-----------------------------1.00--------
...................TTGTCAGGAAGGTGGATG.....................................................................................................................................................................................................................1820.500.50------------------------------------0.50-
.......................................................................................................................................................................................................................................TGAGGTTGCTCTGTGC...1620.500.50-------------------------------------0.50

Antisense strand
GTAGGCACTTAATAAAGTCTTGTCAGGAAGGTGGATGAATGAACGCTTAACACACAGGTGTGTGTGTATCTGCTGTGCTCCTTGCTAGGGGGATCTCCAGCTGGTTGTCTCTGGTTTGTGTCAGATGCAGCCCTGCCTTGACAGAAGCTGTTTCTGACTCCCTGTGTAACACTAACAGGACTTTCTTTTACCTCCTGTAGCCAAACAAAGTCAGGAATGAAACTAAAGAGCTGAGGTTGCTCTGTGCAGA
.............................................................................................................................................((((((...))))))....(((((.........))))).......................................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
TAX577738(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
...................................................................................................................................................................................................................CAGGAATGAAACTAAAG...................... 171.000.00-----------------------1.00--------------