| (3) B-CELL | (4) BREAST | (11) CELL-LINE | (1) CERVIX | (1) HEART | (6) OTHER | (10) SKIN | (1) UTERUS |
| CGGACCGCATGGGCTTCCCGCCCGGGGCCGCGCAGGCCTTGGTGCTGCAGGTGAGGCGGGCGGGCCTGCGGTCTGGGGAGCCGCCGCCCCCGGCCTGCCCTGACTCCTGGCGCCCGCTCCTCCAAGCTCTCCCAGCCTGTTTCCTCCTTTTCCTGGTGTCCTGGGGTTGAGCTTGTGAGAATGGCTTCAGTAATTTGAAGCGCGGATTGGATGTCAGCTTATTCCGCTGAGGTGTTCGCTCCGGACGTCC ..........................................................................((((.((....)))))).(((.((((........)).))......((((((((((((((((.......((..........))....))))))..))))))).)))...)))................................................................. ..........................................................................75...............................................................................................................188............................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR189787 | SRR189784 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | TAX577579(Rovira) total RNA. (breast) | SRR189782 | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | TAX577580(Rovira) total RNA. (breast) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | TAX577746(Rovira) total RNA. (breast) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | GSM532874(GSM532874) G699T. (cervix) | SRR189785 | GSE20417(GSM514985) Colon and lung cancer pool. | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189786 | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR444059(SRX128907) Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin) | SRR191552(GSM715662) 42genomic small RNA (size selected RNA from t. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR444041(SRX128889) Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR444053(SRX128901) Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................GCCGCCGCCCCCGGCGGCG........................................................................................................................................................ | 19 | 54.00 | 0.00 | 31.00 | 23.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................GGGGTTGAGCTTGTGAGAATGG.................................................................. | 22 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....CCGCATGGGCTTCCCGCCCGGGG............................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................CTGGGGAGCCGCCGCCCCCCCA............................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................GCCGCCGCCCCCGGCGGGG........................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................AGGTGTTCGCTCCGGACGTCCGAGG | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CCCAGCCTGTTTCCTCCTAT.................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................GCCTTGGTGCTGCAGTGGC.................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................GGGAGCCGCCGCCCCCGCCGG.......................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................GCCGCCGCCCCCGGCGATC........................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................GCCCGGGGCCGCGCAGGCG.................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................AAGCGCGGATTGGATG..................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................CCCGCCCGGGGCCGCGGT........................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................CCCGCCCGGGGCCGCCCCC....................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................GCAGGTGAGGCGGGCGAG.......................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................GCCGCCGCCCCCGGCGGGC........................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................CCCGCCCGGGGCCGCGGGG....................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................GGTGAGGCGGGCGGGGGG....................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................GCAGGCCTTGGTGCTGCAGGTGAGGCG................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................GTGCTGCAGGTGAGGCTT............................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................GCCGCCGCCCCCGGCGCCG........................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................GCAGGTGAGGCGGGCGG........................................................................................................................................................................................... | 17 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................GGTGAGGCGGGCGGGC......................................................................................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - |
| ..................................................GTGAGGCGGGCGGGC......................................................................................................................................................................................... | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - |
| CGGACCGCATGGGCTTCCCGCCCGGGGCCGCGCAGGCCTTGGTGCTGCAGGTGAGGCGGGCGGGCCTGCGGTCTGGGGAGCCGCCGCCCCCGGCCTGCCCTGACTCCTGGCGCCCGCTCCTCCAAGCTCTCCCAGCCTGTTTCCTCCTTTTCCTGGTGTCCTGGGGTTGAGCTTGTGAGAATGGCTTCAGTAATTTGAAGCGCGGATTGGATGTCAGCTTATTCCGCTGAGGTGTTCGCTCCGGACGTCC ..........................................................................((((.((....)))))).(((.((((........)).))......((((((((((((((((.......((..........))....))))))..))))))).)))...)))................................................................. ..........................................................................75...............................................................................................................188............................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR189787 | SRR189784 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | TAX577579(Rovira) total RNA. (breast) | SRR189782 | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | TAX577580(Rovira) total RNA. (breast) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | TAX577746(Rovira) total RNA. (breast) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | GSM532874(GSM532874) G699T. (cervix) | SRR189785 | GSE20417(GSM514985) Colon and lung cancer pool. | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189786 | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR444059(SRX128907) Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin) | SRR191552(GSM715662) 42genomic small RNA (size selected RNA from t. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR444041(SRX128889) Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR444053(SRX128901) Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................GCCTGTTTCCTCCTTTAGGC................................................................................................ | 20 | 6.00 | 0.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GGCGGGCGGGCCTGCCG................................................................................................................................................................................... | 17 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................CCGCCGCCCCCGGCCA.......................................................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................CTCCCCAGACCGCAGGCCCGC.......................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TTCAGTAATTTGAAGACAG.............................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................CCCCGGCCTGCCCTGACTC................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................GGGGAGCCGCCGCCCCCGT............................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................GCTCTCCCAGCCTGTATG........................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................GGGGAGCCGCCGCCCCCCG............................................................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................GGGGAGCCGCCGCCCGGGG............................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................CAGGCTGGGAGAGCTTGGAGGAGCGGGCGCCAGG............................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TTCCCGCCCGGGGCCGC........................................................................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCCCCCGGCCTGCCCTAT................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCCCCCGGCCTGCCCTAAG.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................GCCTCACCTGCAGCACCA................................................................................................................................................................................................. | 18 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............GCTTCCCGCCCGGGGCCGGGGC........................................................................................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................CTCACCTGCAGCACCA................................................................................................................................................................................................... | 16 | 9 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | 0.22 | - | - | - | 0.11 | 0.11 |
| .......................................................................................................................AGGCTGGGAGAGCTTGGAG................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................CAGGAAAAGGAGGAAACA............................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ................GCGCGGCCCCGGGCGGG......................................................................................................................................................................................................................... | 17 | 4 | 0.25 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................CCTCACCTGCAGCACCA.................................................................................................................................................................................................. | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - |
| .........................................................................................................................AGGCTGGGAGAGCTTGG................................................................................................................ | 17 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - |
| ...............................................................................................................................AGGAAACAGGCTGGGAGA......................................................................................................... | 18 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - |