ID: uc003tgt.2_intron_6_0_chr7_38469178_r
GENE: (6)
chr7:38469128-38469491-


(1)
BRAIN
(6)
CELL-LINE
(1)
HEART
(1)
LIVER
(5)
OTHER
(2)
SKIN
(1)
UTERUS

Sense strand
TGTTACTATTTTCTTTACCCATACAGACAAGCACTGATTTGGTACAGCCGGTAGGTAAATATCCAGATCATTCTGGATTTTTTTGGTATTTGATATGCATTACATACATAGTATATTTTCTAGAATGAACTGTTTCCCCATGGCATTGCTAGTCATAGATTTAAACCTTAAGCCAATGAATGTAATCACTTTCCAGTTTGGTTTTACTGGTGCTACTCGCCTGAAGAGCTTTGTGTTTCTCATCAAATCTTACCATGTTCTGTTTCATCTTTTGTTTTTGTTTTTTTTCCTTTGCTCTTCTGCATACTTTAAAGACTGACTCTTCAGAAAGTCTTTCCTTGTGTAACCTGATCATGGAGGAAAC
..........................................................................................................................................................................................................................((..(((((((..............((((.......(((........)))........)))).............))))))).)).............................................................
.......................................................................................................................................................................................................................216...............................................................................................314................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR343335SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................................................................................................................CTGAAGAGCTTTGTGTAGGG............................................................................................................................206.000.00--6.00--------------
...................................................................................................................................................................................................................................................................................TTTTGTTTTTTTTCCGGG.......................................................................184.000.00-4.00---------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCCGGG.......................................................................244.000.002.002.00---------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTTCGGG........................................................................253.000.002.001.00---------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTCGC............................................................................213.000.003.00----------------
........................................................................................................................................................................................................................................................................TCATCTTTTGTTTTTGTTTTTTGTC...........................................................................252.000.00-2.00---------------
.....................................................................................GTATTTGATATGCATTCC.....................................................................................................................................................................................................................................................................182.000.00----2.00------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCCTTTCGCG...................................................................282.000.00-2.00---------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTTTTGG........................................................................262.000.002.00----------------
..............................................................................................................................................................................................................................................................................TTTGTTTTTGTTTTTTTTCCGGG.......................................................................232.000.00-2.00---------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTTGG..........................................................................222.000.002.00----------------
..............................................................................................................................................................................................................................................................................TTTGTTTTTGTTTTTTTTCGGG........................................................................222.000.002.00----------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCGGG........................................................................232.000.001.001.00---------------
.......................................................................................................................................................................................................................................................................................................TCTTCTGCATACTTTTTG...................................................181.000.00------1.00----------
.................................................................................................................................................................................................................................................................................GTTTTTGTTTTTTTTCCTCCT......................................................................211.000.001.00----------------
...............................................................................................................................................................................................................................................................................TTGTTTTTGTTTTTTTTCCTTTTG.....................................................................241.000.00-1.00---------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTTCCGGGT......................................................................261.000.00-1.00---------------
.........................................................................................................................................................................................................................................................................................TTTTTTTCCTTTGCTCTGTGG..............................................................211.000.001.00----------------
..................................................................................................................................................................................................................................................................................TTTTTGTTTTTTTTCCTTGT......................................................................201.000.00---1.00-------------
..................................................................................................................................................................................................................................................................................TTTTTGTTTTTTTTCCTTTGCC....................................................................221.000.001.00----------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTTCGA.........................................................................251.000.001.00----------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCCGGGT......................................................................251.000.001.00----------------
.................................................................................................................................................................................................................................................................................GTTTTTGTTTTTTTTCGGG........................................................................191.000.001.00----------------
.......................................................................................................................................................................................................................................................................TTCATCTTTTGTTTTGTC...................................................................................181.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTCGGG...........................................................................221.000.00-1.00---------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCCTTTTGCG...................................................................281.000.00---1.00-------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTTCATCT.......................................................................251.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTGTGG.........................................................................241.000.00-1.00---------------
............................................................................................................................................................................................................................CTGAAGAGCTTTGTGTCGGC............................................................................................................................201.000.00------------1.00----
.............................................................................................................................................................................................TTTCCAGTTTGGTTTTGTTA...........................................................................................................................................................201.000.00---1.00-------------
....................................................................................................................................................................................................................................................................................TTTGTTTTTTTTCCTTTGCTTGG.................................................................231.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTGAGC.........................................................................241.000.00-1.00---------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTTCCGGG.......................................................................261.000.00-1.00---------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTCTCC.........................................................................251.000.001.00----------------
................................................................................................................................................................................................................................................................................TGTTTTTGTTTTTTTTCGGG........................................................................201.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTTCGT.........................................................................241.000.001.00----------------
......................................................................................................................................................................................................................................................................................TGTTTTTTTTCCTTTGATA...................................................................191.000.001.00----------------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCGGGT.......................................................................241.000.00-1.00---------------
...................................................................................................................................................................................................................................................................................TTTTGTTTTTTTTCCTGGAG.....................................................................201.000.001.00----------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTCGG..........................................................................221.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTCTTC.........................................................................241.000.00-1.00---------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTTCCGGGT......................................................................281.000.001.00----------------
.............................................................................................................................................................................................................................TGAAGAGCTTTGTGTAGGG............................................................................................................................191.000.00--1.00--------------
...................................................................................................................................................................................................................................................................................TTTTGTTTTTTTTCCTTTGCTCACTG...............................................................261.000.00---1.00-------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTTCTTC........................................................................251.000.00-1.00---------------
..........................................................................................................................................................................................................................................................................................................TCTGCATACTTTAAACTTT...............................................191.000.00----1.00------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTCTTC.........................................................................231.000.00-1.00---------------
........................................................................................................................................................................................................................................................................................TTTTTTTTCCTTTGCTCG..................................................................181.000.00---1.00-------------
..............................................................................................................................................................................................................................................................................TTTGTTTTTGTTTTTTTTCCGGGT......................................................................241.000.00-1.00---------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTTTC..........................................................................241.000.001.00----------------
............................................................................ATTTTTTTGGTATTTGGG..............................................................................................................................................................................................................................................................................181.000.00----------1.00------
.............................................................................................................................................................................................................................................................................TTTTGTTTTTGTTTTTTTTCCGGGC......................................................................251.000.001.00----------------
...........................................................................................................................................................................................................................................................................TCTTTTGTTTTTGTTTTTTTTCGAG........................................................................251.000.00-1.00---------------
...............................................................................................................................................................................................................................................................................TTGTTTTTGTTTTTTTTCGGG........................................................................211.000.001.00----------------
..........................................................................................................................................................................................................................................................................ATCTTTTGTTTTTGTTTTTTTGGGG.........................................................................251.000.001.00----------------
.....................................................................................................................................................................................................................................................................................................................................AGAAAGTCTTTCCTTGTCT....................191.000.00--------------1.00--
................................................................................................................................................................................................................................................................................TGTTTTTGTTTTTTTTCGTT........................................................................201.000.00-1.00---------------
........................................................................................................................................................................................................................................................................TCATCTTTTGTTTTTTCAT.................................................................................191.000.00-------1.00---------
..........................................................................................................................................................................................................................................................................................................TCTGCATACTTTAAATTTT...............................................191.000.00----1.00------------
............................................................................................................................................................................................................................................................................CTTTTGTTTTTGTTTTTTTTCATC........................................................................241.000.001.00----------------
...................................................................................................................................................................................................................................................................................TTTTGTTTTTTTTCCTTTG......................................................................1970.710.710.29--0.29-----------0.14-
...............................................................................................................................................................................................................................................................................TTGTTTTTGTTTTTTTTCCTTTG......................................................................2330.670.670.330.33---------------

Antisense strand
TGTTACTATTTTCTTTACCCATACAGACAAGCACTGATTTGGTACAGCCGGTAGGTAAATATCCAGATCATTCTGGATTTTTTTGGTATTTGATATGCATTACATACATAGTATATTTTCTAGAATGAACTGTTTCCCCATGGCATTGCTAGTCATAGATTTAAACCTTAAGCCAATGAATGTAATCACTTTCCAGTTTGGTTTTACTGGTGCTACTCGCCTGAAGAGCTTTGTGTTTCTCATCAAATCTTACCATGTTCTGTTTCATCTTTTGTTTTTGTTTTTTTTCCTTTGCTCTTCTGCATACTTTAAAGACTGACTCTTCAGAAAGTCTTTCCTTGTGTAACCTGATCATGGAGGAAAC
..........................................................................................................................................................................................................................((..(((((((..............((((.......(((........)))........)))).............))))))).)).............................................................
.......................................................................................................................................................................................................................216...............................................................................................314................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR343335SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................................................................................................................................................TGTTTCATCTTTTGTTTTA..................................................................................... 191.000.00-------------1.00---
..................................................................................................................................................................................AATGTAATCACTTTCGAAG....................................................................................................................................................................... 191.000.00-----------1.00-----
.......................................................................................................................................................................................................................CTCGCCTGAAGAGCTGATC.................................................................................................................................. 191.000.00---------1.00-------
...........................................................................GATTTTTTTGGTATTGGC............................................................................................................................................................................................................................................................................... 181.000.00--------1.00--------
..................................................................................TTGGTATTTGATATGTCTG....................................................................................................................................................................................................................................................................... 191.000.00-----1.00-----------
........................................................................ATACCAAAAAAATCCAG................................................................................................................................................................................................................................................................................... 1730.330.33-----0.33-----------
...............................................................................................................................................................................................................................................................AAGATGAAACAGAACA............................................................................................. 1690.110.11----------------0.11