uc003tff.2_intron_1_0_chr7_36436029

ACAGCCACTTTCAGAAGCAAGTAACCAGCAGCCCCTCTCTGGTGGTGAAGGTAAAAGACTTTGTGGGGAAAAATAACATTTACTTTTTTTTTCTTTTGAAGGAGACAAGCCCCAAACATTTCATTAGCATATAGAAGAACCAAGCTCTTTGGGAGACAAATGTAACAGCCTCTGGGGGAAATAACAGCCTTCTATTCTATTTCAGAGTTATTATATTAGGCCTAGAACCTATAGGGTTGGAACGGTTTCT ..................................................................................(((..(((((((..((...((((.............)))).....))...)))))))..))).......................................................................................................... ........................................................................73.........................................................................148....................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189784	GSM532877(GSM532877) G691N. (cervix)	SRR189782	TAX577740(Rovira) total RNA. (breast)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	SRR060169(GSM565979) 5-8F_cytoplasm. (cell line)	SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................ATTTACTTTTTTTTTCTTTTAAG......................................................................................................................................................	23		5.00	0.00	3.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTTAAG........................................................................................................................................................	21		3.00	0.00	-	-	3.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTTAAG..........................................................................................................................................................	21		3.00	0.00	-	-	-	1.00	2.00	-	-	-	-	-	-	-	-	-
................................................................................TACTTTTTTTTTCTTTTGCTC.....................................................................................................................................................	21		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTTTTG..........................................................................................................................................................	21		3.00	0.00	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTAAG...........................................................................................................................................................	20		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTTTTCAAG.....................................................................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTAAG.........................................................................................................................................................	20		2.00	0.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................TGGTGGTGAAGGTAAACAA................................................................................................................................................................................................	19		2.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	1.00	-	-
............................................................................CATTTACTTTTTTTTTCTGG..........................................................................................................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................TTTACTTTTTTTTTCTTTTAAAG.....................................................................................................................................................	23		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTTTTCTTTTGAAGGAGACAAGCCCC.........................................................................................................................................	26	1	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................CATTTACTTTTTTTTTCTTTTAATG.....................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................CATTTACTTTTTTTTTCTTTTCTTG.....................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................CATTTACTTTTTTTTTCTTTTCG.......................................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................CATTTACTTTTTTTTTCTTTCTTG......................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...GCCACTTTCAGAAGCAAGTAACCAGCAGCCC........................................................................................................................................................................................................................	31	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
............................................................................CATTTACTTTTTTTTTCTTTTAACG.....................................................................................................................................................	25		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00
..............AAGCAAGTAACCAGCGCTC.........................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...............................................................................TTACTTTTTTTTTCTTTTACG......................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................TTACTTTTTTTTTCTTTTGACGG....................................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................TTACTTTTTTTTTCTTTTAATC.....................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................TTTACTTTTTTTTTCTTTAACG......................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................AACATTTACTTTTTTTTTTG............................................................................................................................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................CTTTTTTTTTCTTTTGACTC....................................................................................................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCACA..........................................................................................................................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTTAT...........................................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................ACCTATAGGGTTGGAACGGTTTCTCCTA	28		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTTCGAG.......................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................TAGCATATAGAAGAACTTAG..........................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTCTAAGG........................................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................ACCAGCAGCCCCTCTCGCG................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
..............................................................................TTTACTTTTTTTTTCTTTTATG......................................................................................................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................CTTTTTTTTTCTTTTGACGTA...................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
...............................................................................TTACTTTTTTTTTCTTTCTTG......................................................................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTTTAAG.......................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................AACATTTACTTTTTTTTTTAAG..........................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................ATTTACTTTTTTTTTCTTTTAAA......................................................................................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...........................................................................ACATTTACTTTTTTTTTCTAAG.........................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................TTACTTTTTTTTTCTTTTAAAA.....................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................TTTACTTTTTTTTTCTTTTATTG.....................................................................................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-

ACAGCCACTTTCAGAAGCAAGTAACCAGCAGCCCCTCTCTGGTGGTGAAGGTAAAAGACTTTGTGGGGAAAAATAACATTTACTTTTTTTTTCTTTTGAAGGAGACAAGCCCCAAACATTTCATTAGCATATAGAAGAACCAAGCTCTTTGGGAGACAAATGTAACAGCCTCTGGGGGAAATAACAGCCTTCTATTCTATTTCAGAGTTATTATATTAGGCCTAGAACCTATAGGGTTGGAACGGTTTCT
..................................................................................(((..(((((((..((...((((.............)))).....))...)))))))..)))..........................................................................................................
........................................................................73.........................................................................148....................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189784

GSM532877(GSM532877)
G691N. (cervix)

SRR189782

TAX577740(Rovira)
total RNA. (breast)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.............................................................................ATTTACTTTTTTTTTCTTTTAAG......................................................................................................................................................

5.00

0.00

3.00

1.00

.............................................................................ATTTACTTTTTTTTTCTTAAG........................................................................................................................................................

3.00

0.00

3.00

...........................................................................ACATTTACTTTTTTTTTTAAG..........................................................................................................................................................

3.00

0.00

1.00

2.00

................................................................................TACTTTTTTTTTCTTTTGCTC.....................................................................................................................................................

3.00

0.00

3.00

...........................................................................ACATTTACTTTTTTTTTTTTG..........................................................................................................................................................

3.00

0.00

1.00

...........................................................................ACATTTACTTTTTTTTTAAG...........................................................................................................................................................

2.00

0.00

2.00

.............................................................................ATTTACTTTTTTTTTCTTTTCAAG.....................................................................................................................................................

2.00

0.00

2.00

.............................................................................ATTTACTTTTTTTTTCTAAG.........................................................................................................................................................

2.00

0.00

1.00

.......................................TGGTGGTGAAGGTAAACAA................................................................................................................................................................................................

2.00

0.00

1.00

............................................................................CATTTACTTTTTTTTTCTGG..........................................................................................................................................................

1.00

0.00

1.00

..............................................................................TTTACTTTTTTTTTCTTTTAAAG.....................................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTTTTCTTTTGAAGGAGACAAGCCCC.........................................................................................................................................

1.00

............................................................................CATTTACTTTTTTTTTCTTTTAATG.....................................................................................................................................................

1.00

0.00

1.00

............................................................................CATTTACTTTTTTTTTCTTTTCTTG.....................................................................................................................................................

1.00

0.00

1.00

............................................................................CATTTACTTTTTTTTTCTTTTCG.......................................................................................................................................................

1.00

0.00

1.00

............................................................................CATTTACTTTTTTTTTCTTTCTTG......................................................................................................................................................

1.00

0.00

1.00

...GCCACTTTCAGAAGCAAGTAACCAGCAGCCC........................................................................................................................................................................................................................

1.00

............................................................................CATTTACTTTTTTTTTCTTTTAACG.....................................................................................................................................................

1.00

0.00

1.00

..............AAGCAAGTAACCAGCGCTC.........................................................................................................................................................................................................................

1.00

0.00

1.00

...............................................................................TTACTTTTTTTTTCTTTTACG......................................................................................................................................................

1.00

0.00

1.00

...............................................................................TTACTTTTTTTTTCTTTTGACGG....................................................................................................................................................

1.00

0.00

1.00

...............................................................................TTACTTTTTTTTTCTTTTAATC.....................................................................................................................................................

1.00

0.00

1.00

..............................................................................TTTACTTTTTTTTTCTTTAACG......................................................................................................................................................

1.00

0.00

1.00

..........................................................................AACATTTACTTTTTTTTTTG............................................................................................................................................................

1.00

0.00

1.00

..................................................................................CTTTTTTTTTCTTTTGACTC....................................................................................................................................................

1.00

0.00

1.00

.............................................................................ATTTACTTTTTTTTTCACA..........................................................................................................................................................

1.00

0.00

1.00

...........................................................................ACATTTACTTTTTTTTTTAT...........................................................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................................ACCTATAGGGTTGGAACGGTTTCTCCTA

1.00

0.00

1.00

.............................................................................ATTTACTTTTTTTTTCTTCGAG.......................................................................................................................................................

1.00

0.00

1.00

............................................................................................................................TAGCATATAGAAGAACTTAG..........................................................................................................

1.00

0.00

1.00

...........................................................................ACATTTACTTTTTTTTTCTAAGG........................................................................................................................................................

1.00

0.00

1.00

.......................ACCAGCAGCCCCTCTCGCG................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................TTTACTTTTTTTTTCTTTTATG......................................................................................................................................................

1.00

0.00

1.00

..................................................................................CTTTTTTTTTCTTTTGACGTA...................................................................................................................................................

1.00

0.00

1.00

...............................................................................TTACTTTTTTTTTCTTTCTTG......................................................................................................................................................

1.00

0.00

1.00

.............................................................................ATTTACTTTTTTTTTCTTTAAG.......................................................................................................................................................

1.00

0.00

1.00

..........................................................................AACATTTACTTTTTTTTTTAAG..........................................................................................................................................................

1.00

0.00

1.00

.............................................................................ATTTACTTTTTTTTTCTTTTAAA......................................................................................................................................................

1.00

0.00

1.00

...........................................................................ACATTTACTTTTTTTTTCTAAG.........................................................................................................................................................

1.00

0.00

1.00

...............................................................................TTACTTTTTTTTTCTTTTAAAA.....................................................................................................................................................

1.00

0.00

1.00

..............................................................................TTTACTTTTTTTTTCTTTTATTG.....................................................................................................................................................

1.00

0.00

1.00