| (9) B-CELL | (1) BRAIN | (3) BREAST | (12) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (1) HEART | (3) HELA | (1) LIVER | (1) OTHER | (3) SKIN | (4) UTERUS | (1) XRN.ip |
| CCGGGGTGACAAAACAAGACCTCATCTCTAAAAAAGTAATAACAAAATAAATAAACGGTAATTTGATGTGGTGGCTTGCTTTTTAAAAATAATGCCTTAATATTTTTATGTCTTTAAATAAGACAGGTTTCTGCTTGGTATCAAAGGAACCTGGGGAAAGAAGAATGAAAACTAATTAATTAATTTTCTTTTACTTTTAGATGCCAGAATTCCAGAAAAGTTCAGTTCGAATCAAGAACCCTACAAGAGT ................................................................(((((...(((..................)))...)))))...................(((((((((..(((....))))))))))))..(((((.((((.(((((.(((....))).))))))))).))))).................................................... ............................................................61.........................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | TAX577743(Rovira) total RNA. (breast) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189785 | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | GSM359177(GSM359177) hela_nucl_a. (hela) | GSM532872(GSM532872) G652T. (cervix) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR029129(GSM416758) SW480. (cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR191488(GSM715598) 14genomic small RNA (size selected RNA from t. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................ATGTGGTGGCTTGCTTTT....................................................................................................................................................................... | 18 | 1 | 34.00 | 34.00 | 3.00 | 5.00 | - | 1.00 | 2.00 | - | 3.00 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................ATGTGGTGGCTTGCTTT........................................................................................................................................................................ | 17 | 1 | 14.00 | 14.00 | - | - | - | 4.00 | 2.00 | 4.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CTTGGTATCAAAGGAACCTGGGGAAAGAAGAATGAAAACTAATTAATTAATTTTCTTTTACTTTTAGATGC.............................................. | 71 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................ATGTGGTGGCTTGCTTTTAA..................................................................................................................................................................... | 20 | 1 | 4.00 | 34.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................ATGTGGTGGCTTGCTTTA....................................................................................................................................................................... | 18 | 1 | 4.00 | 14.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................ATGTGGTGGCTTGCTTTTA...................................................................................................................................................................... | 19 | 1 | 2.00 | 34.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTAATTAATTTTCTTTTTTG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CTAATTAATTAATTTTCTTTTACTTT..................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................TCAAAGGAACCTGGGGAAAGAAGAA..................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTAATTAATTTTCTTTTACTTTTAG.................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................GTTCGAATCAAGAACTCTG....... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTAATTAATTTTCTATCG......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................CGAATCAAGAACCCTACAAGAGT | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AGTTCAGTTCGAATCAAGAACCCT........ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................ATGTGGTGGCTTGCTTG........................................................................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................ATGTGGTGGCTTGCTGTTA...................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................AATTTTCTTTTACTTTGCAA................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................CAGAATTCCAGAAAAGTTCAGTTCGAATC................. | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..........................................................................................................................................................................................................GCCAGAATTCCAGAAAAGTTCAGTTC...................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ............................................................................................................................................................................................................................TTCAGTTCGAATCAAG.............. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ................................................................................................................................................................................................................ATTCCAGAAAAGTTCAGTT....................... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| CCGGGGTGACAAAACAAGACCTCATCTCTAAAAAAGTAATAACAAAATAAATAAACGGTAATTTGATGTGGTGGCTTGCTTTTTAAAAATAATGCCTTAATATTTTTATGTCTTTAAATAAGACAGGTTTCTGCTTGGTATCAAAGGAACCTGGGGAAAGAAGAATGAAAACTAATTAATTAATTTTCTTTTACTTTTAGATGCCAGAATTCCAGAAAAGTTCAGTTCGAATCAAGAACCCTACAAGAGT ................................................................(((((...(((..................)))...)))))...................(((((((((..(((....))))))))))))..(((((.((((.(((((.(((....))).))))))))).))))).................................................... ............................................................61.........................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | TAX577743(Rovira) total RNA. (breast) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189785 | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | GSM359177(GSM359177) hela_nucl_a. (hela) | GSM532872(GSM532872) G652T. (cervix) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR029129(GSM416758) SW480. (cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR191488(GSM715598) 14genomic small RNA (size selected RNA from t. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................GGGAAAGAAGAATGAAAAAATT........................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................TAAACGGTAATTTGAA....................................................................................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................AATAAATAAACGGTAAATTC......................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........CAAAACAAGACCTCAGC................................................................................................................................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......TGACAAAACAAGACCTCAGGTA.............................................................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................AAAAAAGTAATAACAAACCGT........................................................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |