ID: uc003tdi.2_intron_4_0_chr7_33060970_r.5p
GENE: (5)
chr7:33061465-33061714-


(1)
AGO2.ip 		(2)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(2)
LIVER 		(8)
OTHER 		(1)
RRP40.ip 		(20)
SKIN

Sense strand
TAGATATCATTGACAACTGTAAGCTGGTTACAGATGAATGTAGAAAAAAGGTAAACACTAACAACAATCTATAGTCACTCAAAGACTTCATTACCCTTTTTGCCTGAGAATTTCTTCAGGTGCATTCACAGAAGTAAGAATGGATGTAAAGTGCTTACAGCCATACCTGGCACATAGTAAGCACTCAGTAAATAGTAGGTTTGCTGTATGAATTACACATTCAAAACATATTTTAAAGATAAAAATTCAC
..................................................((((.((((.(((.((.(((..((((.......))))..............(((((((......)))))))...............))).))..)))..)))).))))............................................................................................
..................................................51....................................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189786SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189785SRR343335SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR189783GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
..................................................................................................................................................TAAAGTGCTTACAGCGCAG.....................................................................................1950.000.0022.0012.004.002.00-5.002.00-2.001.00--------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGC.......................................................................................179.000.00--3.006.00--------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCAGGTA...................................................................................217.000.00--7.00---------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCCG.....................................................................................194.000.001.001.00---2.00------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCTTC.....................................................................................193.000.00------2.00-1.00---------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCA......................................................................................183.000.00----3.00-------------------------------------------
.....ATCATTGACAACTGTAAGC..................................................................................................................................................................................................................................1912.002.00-------1.00--------------------------1.00-------------
..................................................................................................................................................TAAAGTGCTTACAGCAGGT.....................................................................................192.000.00--1.001.00--------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCAA.....................................................................................192.000.001.00--1.00--------------------------------------------
.....................AGCTGGTTACAGATGAATGTAGAAA............................................................................................................................................................................................................2512.002.00----------2.00-------------------------------------
....................AAGCTGGTTACAGATGAATGTAGA..............................................................................................................................................................................................................2412.002.00-----------------2.00------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCTCAG.....................................................................................192.000.00-2.00----------------------------------------------
....................................AATGTAGAAAAAAGGTAAACACTAACAACAATCT....................................................................................................................................................................................3412.002.00-------------2.00----------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGGAT.....................................................................................192.000.00--1.00-1.00-------------------------------------------
...................................................................................................................................................AAAGTGCTTACAGCCAAA.....................................................................................182.000.00----2.00-------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCAT.....................................................................................192.000.00-1.00---1.00------------------------------------------
.............................ACAGATGAATGTAGAAAAAAG........................................................................................................................................................................................................2121.501.50-----------1.00---------------------------0.50--------
..............................CAGATGAATGTAGAAAAA..........................................................................................................................................................................................................1821.501.50-------------------------------------------0.50--0.500.50
.................................ATGAATGTAGAAAAAAG........................................................................................................................................................................................................1731.331.33------------------0.33--------------------0.33--0.67-----
........ATTGACAACTGTAAGCTGGT..............................................................................................................................................................................................................................2011.001.00---------------------------------1.00--------------
...............................AGATGAATGTAGAAAAAAG........................................................................................................................................................................................................1921.001.00------------------0.50-------------------------0.50---
....TATCATTGACAACTGTAAGCTGGT..............................................................................................................................................................................................................................2411.001.00------------------------1.00-----------------------
..................................................................................................................................................TAAAGTGCTTACAGCCCAAG....................................................................................201.000.00------1.00-----------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCCC.....................................................................................191.000.001.00-----------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCAGGGA...................................................................................211.000.00--1.00---------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGCTG.....................................................................................191.000.00-1.00----------------------------------------------
........ATTGACAACTGTAAGCTG................................................................................................................................................................................................................................1811.001.00----------1.00-------------------------------------
.........................GGTTACAGATGAATGTAGA..............................................................................................................................................................................................................1911.001.00--------------------------1.00---------------------
.....................................................AACACTAACAACAATGACA..................................................................................................................................................................................191.000.00--------------1.00---------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCCAGG....................................................................................201.000.00---1.00--------------------------------------------
.....................AGCTGGTTACAGATGAATGTAGA..............................................................................................................................................................................................................2311.001.00--------------------------------1.00---------------
.........TTGACAACTGTAAGCTGGA..............................................................................................................................................................................................................................191.000.00-----------------------------1.00------------------
..............................................................................................................................CACAGAAGTAAGAATGGATGTAAAGTGCT...............................................................................................2911.001.00---------------1.00--------------------------------
..................GTAAGCTGGTTACAGATGAATGTAG...............................................................................................................................................................................................................2511.001.00----------------------1.00-------------------------
...................................GAATGTAGAAAAAAGGTAAACACTA..............................................................................................................................................................................................2511.001.00-------------------------------------1.00----------
..................................................................................................................................................TAAAGTGCTTACAGCCAAAT....................................................................................201.000.00---1.00--------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGGC......................................................................................181.000.001.00-----------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCGGAG.....................................................................................191.000.00-1.00----------------------------------------------
.........................................................................................................................GCATTCACAGAAGTAAG................................................................................................................1711.001.00-------------------1.00----------------------------
........................TGGTTACAGATGAATGTAGAAAAAAG........................................................................................................................................................................................................2611.001.00------------1.00-----------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCAGAT.....................................................................................191.000.001.00-----------------------------------------------
.................................ATGAATGTAGAAAAATGGT......................................................................................................................................................................................................191.000.00----------------------------1.00-------------------
.................................ATGAATGTAGAAAAAAGGTAAACAC................................................................................................................................................................................................2511.001.00------------------------------------1.00-----------
....................................................AAACACTAACAACAATGACA..................................................................................................................................................................................201.000.00----------------1.00-------------------------------
...................................GAATGTAGAAAAAAGGTAAATA.................................................................................................................................................................................................221.000.00---------------------1.00--------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCAGGG....................................................................................201.000.00---1.00--------------------------------------------
............ACAACTGTAAGCTGGTTACA..........................................................................................................................................................................................................................2011.001.00-----------------------------------1.00------------
..............................CAGATGAATGTAGAAAAAA.........................................................................................................................................................................................................1921.001.00-------0.50-------------------------------------0.50--
...............................AGATGAATGTAGAAAAA..........................................................................................................................................................................................................1731.001.00----------------------------------------0.670.33------
........................TGGTTACAGATGAATGTAGAAAA...........................................................................................................................................................................................................2311.001.00-------1.00----------------------------------------
......................GCTGGTTACAGATGAATGTAGAAAAAAGGT......................................................................................................................................................................................................3011.001.00--------------------1.00---------------------------
..................................................................................................................................................TAAAGTGCTTACAGCTC.......................................................................................171.000.00---1.00--------------------------------------------
...................................................................................................................................................AAAGTGCTTACAGCCCAG.....................................................................................181.000.00----1.00-------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCTA......................................................................................181.000.00----1.00-------------------------------------------
..........................GTTACAGATGAATGTAGA..............................................................................................................................................................................................................1811.001.00-------1.00----------------------------------------
..............................CAGATGAATGTAGAAAAAAGGTA.....................................................................................................................................................................................................2311.001.00------------1.00-----------------------------------
..........................GTTACAGATGAATGTAGAAAAAAG........................................................................................................................................................................................................2411.001.00-------------------------------1.00----------------
..................................................................................................................................................TAAAGTGCTTACAGCTTCG.....................................................................................191.000.00-1.00----------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCAGGT....................................................................................201.000.00---1.00--------------------------------------------
..................................................................................................................................................................................................................AATTACACATTCAAAACATATTTAAAG.............271.000.00-----------------------1.00------------------------
..............AACTGTAAGCTGGTTAC...........................................................................................................................................................................................................................1711.001.00---------------------------1.00--------------------
.....ATCATTGACAACTGTAAG...................................................................................................................................................................................................................................1811.001.00--------------------------------------1.00---------
...................................................................................................................................................AAAGTGCTTACAGCCCAA.....................................................................................181.000.00----1.00-------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCG........................................................................................161.000.00---1.00--------------------------------------------
...........GACAACTGTAAGCTGGTTA............................................................................................................................................................................................................................1911.001.00------------------------------1.00-----------------
........ATTGACAACTGTAAGCTGG...............................................................................................................................................................................................................................1911.001.00---------------1.00--------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCCCA......................................................................................181.000.00----1.00-------------------------------------------
..................................................................................................................................................TAAAGTGCTTACAGCTCA......................................................................................181.000.00----1.00-------------------------------------------
...............................AGATGAATGTAGAAAAAA.........................................................................................................................................................................................................1830.330.33-------------------0.33----------------------------
............ACAACTGTAAGCTGGT..............................................................................................................................................................................................................................1630.330.33-----------------------------------------0.33------
..................................TGAATGTAGAAAAAAG........................................................................................................................................................................................................1680.250.25-------0.12----------0.12-----------------------------
...............................AGATGAATGTAGAAAA...........................................................................................................................................................................................................1680.250.25-------0.12-----------0.12----------------------------
.............................ACAGATGAATGTAGAAA............................................................................................................................................................................................................1740.250.25------------------0.25-----------------------------
..........................GTTACAGATGAATGT.................................................................................................................................................................................................................1540.250.25------------------0.25-----------------------------

Antisense strand
TAGATATCATTGACAACTGTAAGCTGGTTACAGATGAATGTAGAAAAAAGGTAAACACTAACAACAATCTATAGTCACTCAAAGACTTCATTACCCTTTTTGCCTGAGAATTTCTTCAGGTGCATTCACAGAAGTAAGAATGGATGTAAAGTGCTTACAGCCATACCTGGCACATAGTAAGCACTCAGTAAATAGTAGGTTTGCTGTATGAATTACACATTCAAAACATATTTTAAAGATAAAAATTCAC
..................................................((((.((((.(((.((.(((..((((.......))))..............(((((((......)))))))...............))).))..)))..)))).))))............................................................................................
..................................................51....................................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189786SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189785SRR343335SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR189783GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
....................................AATGTAGAAAAAAGGAAG.................................................................................................................................................................................................... 182.000.00-2.00----------------------------------------------
.........................................................CTAACAACAATCTATCAGT.............................................................................................................................................................................. 192.000.00--------------1.00-1.00-------------------------------
...............................................................................................................................................................................................................ATGAATTACACATTCAACA........................ 192.000.00---------2.00--------------------------------------
....................................................................................................................................................AAGTGCTTACAGCCACGAC................................................................................... 192.000.00-----------1.00-------------1.00----------------------
............................TACAGATGAATGTAGAAAAACTG....................................................................................................................................................................................................... 231.000.00--1.00---------------------------------------------