ID: uc003sxn.1_intron_7_0_chr7_25208085_r.5p
GENE: C7orf31(2)
chr7:25218594-25218843-


(1)
AGO2.ip
(3)
B-CELL
(2)
BRAIN
(2)
BREAST
(13)
CELL-LINE
(2)
CERVIX
(1)
HELA
(4)
LIVER
(1)
OTHER
(6)
SKIN

Sense strand
TTGCACAACCCCCTCCAGACGGTTACTCGCCCAACTGCCTCAGAGGACAGGTAAAACAAAAACTAGAAAAAGCAAACAAGAAAAAGCAGTTTTAATGTATTCGTGTATTTTATTATGTGAGGAAAAACATTTATTGTTCTGGGGCTCTTCTGTTTCTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACGGTGTCTCGCTCTGTCGCCCAGGCTGGAGTGTAGTGGTGCGATCTCGGCTCACTGGGACCT
............................................................................................................................(((((..((.......(((((......))))).....))..)))))................................................................................
............................................................................................................................125............................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTCTCG..................................................................244.000.002.002.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTCTTC......................................................................263.000.003.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTGG.....................................................................293.000.001.001.001.00---------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTCCT.........................................................................233.000.00-3.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTCTTG.................................................................313.000.00--3.00---------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTCT.......................................................................273.000.003.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGAGGC...........................................................................253.000.003.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTAGAG..................................................................303.000.003.00-----------------------------------
...............................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTCG..................................................................252.000.00-2.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGAAG........................................................................262.000.00-2.00----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTCTG.....................................................................262.000.001.001.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTTCTG....................................................................292.000.001.00-1.00---------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTC.........................................................................232.000.00-2.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTTTA.....................................................................282.000.00-2.00----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGGAC....................................................................272.000.00-2.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTCTC....................................................................282.000.002.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTCTTG.....................................................................262.000.00-2.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTCT.......................................................................252.000.002.00-----------------------------------
................................................................................................................................................................................TTGTTTTTGAGACGGTGTCTCGCTGC................................................262.000.001.001.00----------------------------------
.........................................................................................................................................................................................................TGTCGCCCAGGCTGGAGTGTAGCGCC.......................262.000.001.001.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTC.........................................................................242.000.001.00-1.00---------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTGTC.....................................................................292.000.002.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTCAT.........................................................................252.000.00-2.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTCTCC......................................................................262.000.002.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTTTT.........................................................................272.000.001.001.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTTTGG................................................................322.000.001.001.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTCTTC......................................................................282.000.002.00-----------------------------------
............................................................................................................................................................................................................................TAGTGGTGCGATCTCGGCTCACAGC.....252.000.002.00-----------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGTTTGTTCG.......................................................................282.000.002.00-----------------------------------
...............................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCCTT..................................................................252.000.002.00-----------------------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGTTTTG..........................................................................282.000.00-2.00----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGCGAG.......................242.000.00-2.00----------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGTTTGTTTGG......................................................................292.000.001.001.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTCTC.....................................................................272.000.002.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTGG...........................................................................232.000.00-2.00----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTTTAG........................................................................282.000.00-2.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTCCT.......................................................................272.000.002.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTCCG..................................................................292.000.002.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTCTT.........................................................................252.000.002.00-----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGCGAC.......................242.000.002.00-----------------------------------
...........................................................................................................................................TGGGGCTCTTCTGTTTGACG...........................................................................................202.000.00------2.00-----------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTCT........................................................................252.000.002.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTCAC..................................................................292.000.002.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTT........................................................................2851.201.20-1.20----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGTGGTGCCT...................281.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGCTTG...................................................................291.000.00--1.00---------------------------------
.............................................................................................................................................................................................................................AGTGGTGCGATCTCGGAAA..........191.000.00---------------------------1.00--------
....................................................................................................................................................................................................................CTGGAGTGTAGTGGTGCGATCTCGGGCT..........281.000.001.00-----------------------------------
.......................................................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGTAGCGAC.......................281.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTCTTG......................................................................261.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTTACC................................................................321.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTTCC.................................................................311.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTC.....................................................................271.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTGAG.......................................................................261.000.001.00-----------------------------------
.............................................................................................................................................................................................................GCCCAGGCTGGAGTGTAGTGGTGCTATA.................281.000.00----1.00-------------------------------
...................................................................................................................................................................................TTTTTGAGACGGTGTCCCGC...................................................201.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTC........................................................................251.000.00-1.00----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTAAC.........................................................................271.000.00-1.00----------------------------------
.....................................................................................................................................................................................................................TGGAGTGTAGTGGTGCGATCTCGGCTCAG........291.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTCCCC.....................................................................261.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTAG.....................................................................291.000.00--1.00---------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGTTTGTTTGTTG....................................................................311.000.00-1.00----------------------------------
............................................................................................................................................................................................................CGCCCAGGCTGGAGTGTAGTGGTGCTGAT.................291.000.00----1.00-------------------------------
........................................................................................................................................................................................................................AGTGTAGTGGTGCGATCTCGGTA...........231.000.00------------------------------1.00-----
.................................................................................................................................................................................................................AGGCTGGAGTGTAGTGGTGATTG..................231.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTACG.....................................................................291.000.00-1.00----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTCGT..................................................................291.000.001.00-----------------------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGTTTGAG.........................................................................2911.001.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTCGTT.....................................................................271.000.00-1.00----------------------------------
.................................................................................................................................................................................................................AGGCTGGAGTGTAGTGGTGCTATA.................241.000.00--------1.00---------------------------
..................................................................................................................................................................................................................GGCTGGAGTGTAGTGGTTATC...................211.000.00-------------------------1.00----------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTAG..................................................................301.000.00-1.00----------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTCTTG............................................................................231.000.001.00-----------------------------------
.....................................................................................................................................................................................TTTGAGACGGTGTCTCGCTGG................................................211.000.00-1.00----------------------------------
...............................................................................................................................................................................................................CCAGGCTGGAGTGTAGTGGTTTC....................231.000.00---1.00--------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTCGG.....................................................................261.000.001.00-----------------------------------
....................................................................................................................................................................................................................CTGGAGTGTAGTGGTGCTATA.................211.000.00--------1.00---------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTTTA.........................................................................271.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTGC............................................................................201.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTAGC.......................................................................241.000.001.00-----------------------------------
................................................................................................................................................................................TTGTTTTTGAGACGGTGTCTGG....................................................221.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTCTC.......................................................................251.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTCG.....................................................................291.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGCTG........................................................................241.000.00--1.00---------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTCTTC......................................................................251.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGGCT....................................................................281.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGGC.........................................................................251.000.001.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTGT............................................................................241.000.00-1.00----------------------------------
.................................ACTGCCTCAGAGGACAGGTA.....................................................................................................................................................................................................2011.001.00-----1.00------------------------------
...............................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTAC..................................................................251.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTAGAG................................................................321.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTAGG..................................................................291.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTCTG....................................................................301.000.001.00-----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGTGGTGCTACC.................301.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTGG.....................................................................271.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTCGAG........................................................................261.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTCCT......................................................................261.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTCC.....................................................................271.000.001.00-----------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTCCT..............................................................................211.000.00-1.00----------------------------------
.......................................................................................................................................................................TTTGTTTGTTTGTTTTTGAGACGGTAATA......................................................291.000.00-------------1.00----------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGCCTG...................................................................281.000.00--1.00---------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTGGGAC...................................................................301.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTCGGC.........................................................................251.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTCGAG....................................................................271.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTCC......................................................................271.000.00-1.00----------------------------------
.............................................................................................................................................................................................................GCCCAGGCTGGAGTGTAGTGGAAAG....................251.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTCTCC........................................................................251.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTCT.....................................................................291.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTGAG.......................................................................241.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTCTG....................................................................281.000.00--1.00---------------------------------
...................................................................................................................................................................................................................GCTGGAGTGTAGTGGTGCGACCGT...............241.000.00----------------------------1.00-------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTCTGG.............................................................................221.000.001.00-----------------------------------
.....................................................................................................................................................CTGTTTCTTGTTTGTTTGTTTCC..............................................................................231.000.001.00-----------------------------------
.........................................................................................................................................................................................................TGTCGCCCAGGCTGGAGTGTAGCGAC.......................261.000.001.00-----------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGTTTGTTTTATT....................................................................311.000.00-1.00----------------------------------
.....................................................................................................................................................................TGTTTGTTTGTTTGTTTTTGAGAAGGA..........................................................271.000.00---------------1.00--------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTTC..................................................................301.000.00-1.00----------------------------------
.................................................................................................................................................................................................................AGGCTGGAGTGTAGTGGTGCGACA.................2401.001.00-------------------1.00----------------
..................................................................................................................................................................................................................GGCTGGAGTGTAGTGGTGCTGG..................221.000.00---1.00--------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTCCT.........................................................................241.000.00-1.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTCT......................................................................271.000.00-1.00----------------------------------
................................................................................................................................................................................................................CAGGCTGGAGTGTAGTGGTGCGATCTC...............2701.001.00-----------1.00------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTTGCT....................................................................291.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTTA.....................................................................291.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTGTGT..........................................................................241.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTCCGT.....................................................................291.000.001.00-----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGCGCC.......................241.000.001.00-----------------------------------
...................................................................................................................................................................................................................GCTGGAGTGTAGTGGTGCGACCCT...............241.000.00---------1.00--------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTCTGA....................................................................301.000.001.00-----------------------------------
.................................................................................................................................................................................................................AGGCTGGAGTGTAGTGGTGCGATTTTT..............271.000.00-------1.00----------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTGGT..........................................................................231.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTTCC.....................................................................291.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTCTG.......................................................................251.000.00-1.00----------------------------------
...........................................................................................................................................................................................................TCGCCCAGGCTGGAGTGTAGTGTCCC.....................261.000.001.00-----------------------------------
..............................................................................................................................................................................................................CCCAGGCTGGAGTGTAGTGGTTTTT...................251.000.00----------------------------------1.00-
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTGGC......................................................................251.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTCGG.........................................................................241.000.001.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTAGAG.........................................................................271.000.00-1.00----------------------------------
.......................................................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGTAGCGCC.......................281.000.001.00-----------------------------------
............................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTTTTCGGG...............................................................311.000.00-1.00----------------------------------
..................................................................................................................................................................................................CTCGCTCTGTCGCCCAGGCTGT..................................221.000.00------------------1.00-----------------
................................................................................................................................................................................TTGTTTTTGAGACGGTGTCTCGCTG.................................................251.000.00--1.00---------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTTACT.................................................................301.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTCGG.........................................................................231.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTCG.......................................................................271.000.00--1.00---------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTCTG......................................................................271.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTAG...................................................................281.000.00-1.00----------------------------------
................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTTTGAGGAAG...........................................................311.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTCCTT..........................................................................221.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTTTCCTC................................................................321.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTAGAG......................................................................251.000.001.00-----------------------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGAGAC...........................................................................271.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTCCTG....................................................................301.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTCCGC....................................................................271.000.001.00-----------------------------------
............................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCCGC..................................................................281.000.001.00-----------------------------------
...............................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTTTGAACA.............................................................301.000.00--1.00---------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTCG.......................................................................241.000.001.00-----------------------------------
..................................................................................................................................................................................................................GGCTGGAGTGTAGTGGTGCGATCGCC..............261.000.00-----------------------1.00------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTGAG.......................................................................251.000.001.00-----------------------------------
.....................................................................................................................................................................................................................TGGAGTGTAGTGGTGCGGA..................191.000.00----------1.00-------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTACG.....................................................................271.000.001.00-----------------------------------
.........................................................................................................................................................................................................TGTCGCCCAGGCTGGAGTGTAGCGTC.......................261.000.001.00-----------------------------------
............................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCTCG..................................................................281.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTCGGC.....................................................................261.000.00-1.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTTGG.....................................................................281.000.00-1.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGGAG........................................................................251.000.00-1.00----------------------------------
............................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTTTTCGGC...............................................................311.000.001.00-----------------------------------
.................................................................................................................................TTTATTGTTCTGGGGCTCTTCTGT.................................................................................................2411.001.00--------------------------1.00---------
.............................................................................................................................................................................................................GCCCAGGCTGGAGTGTAGTGGTCTG....................251.000.00----1.00-------------------------------
...................................................................................................................................................................................................................GCTGGAGTGTAGTGGTTAAA...................201.000.00-----1.00------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTCAT...........................................................................221.000.00-1.00----------------------------------
.............................................................................................................................................................................................................GCCCAGGCTGGAGTGTATTTG........................211.000.00--------------1.00---------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGTTTGTTTT.......................................................................311.000.001.00-----------------------------------
.............................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTCTGC..................................................................271.000.00-1.00----------------------------------
..........................................................................................................................................................................................................................TGTAGTGGTGCGATCTCGGCTCACAGC.....271.000.00-1.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTGTTT.....................................................................281.000.00-1.00----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTGTTTGAC.................................................................301.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTGTTTTGC.................................................................321.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTGTTCTG..................................................................321.000.00--1.00---------------------------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGGT.............................................................................221.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTCACA........................................................................251.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTCTTG......................................................................271.000.001.00-----------------------------------
................................................................................................................................................................................................................CAGGCTGGAGTGTAGTGGTTGAC...................231.000.00-------1.00----------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTCTTA......................................................................271.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTCTGG.........................................................................241.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTGTCTT...................................................................291.000.00-1.00----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTAGT.....................................................................261.000.00-1.00----------------------------------
.........................................................................................................................................................................................................TGTCGCCCAGGCTGGAGTGTAGCGCG.......................261.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTCTTT......................................................................281.000.00-1.00----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTGTCG..........................................................................231.000.00--1.00---------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTCTG......................................................................261.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTAAC....................................................................281.000.00-1.00----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTCTTC....................................................................281.000.00-1.00----------------------------------
..................................................................................................................................................................................................................GGCTGGAGTGTAGTGGTGAAGT..................221.000.00---1.00--------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTATG.....................................................................291.000.00-1.00----------------------------------
.......ACCCCCTCCAGACGGC...................................................................................................................................................................................................................................161.000.00------------------------1.00-----------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGAGGC.......................................................................261.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTTTGGT....................................................................281.000.00-1.00----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTCTG..........................................................................261.000.001.00-----------------------------------
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTG........................................................................251.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTGTG.....................................................................291.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTCT........................................................................261.000.001.00-----------------------------------
....................................................................................................................................................................................................................CTGGAGTGTAGTGGTTATC...................191.000.00--------------------1.00---------------
.......................................................................................................................................................GTTTCTTGTTTGTTTGTTTGTTTGGG.........................................................................261.000.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTGAG.......................................................................271.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTAATT........................................................................261.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTTTGTTTTC..................................................................321.000.001.00-----------------------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGTTCTG..........................................................................281.000.001.00-----------------------------------
..........................................................................................................................................................TCTTGTTTGTTTGTTTGTTTGTTC........................................................................241.000.001.00-----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTCTTT........................................................................261.000.00-1.00----------------------------------
.................................................................................................................................................................................................................AGGCTGGAGTGTAGTGGTGCGA...................2201.001.00----------------------1.00-------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGTTTGTTTG...........................................................................2711.001.00-1.00----------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGTCTG.......................................................................271.000.00--1.00---------------------------------
........................................................................................................................................................TTTCTTGTTTGTTTGTTTGTTTGAGTG.......................................................................271.000.00-1.00----------------------------------
............................................................................................................................................................................................................CGCCCAGGCTGGAGTGTAGTGCGCA.....................251.000.001.00-----------------------------------
...........................................................................................................................................................CTTGTTTGTTTGTTTGTTTGTTTTCC.....................................................................261.000.001.00-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTG...........................................................................2560.670.670.500.17----------------------------------
..........................................................................AACAAGAAAAAGCAGTT...............................................................................................................................................................1720.500.50-----------------------------------0.50
.........................................................................................................................................................TTCTTGTTTGTTTGTTTGTTTGTTTGTTTTTG.................................................................3260.500.500.170.33----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGT..........................................................................2650.400.400.200.20----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTTTTTG....................................................................3250.401.200.200.20----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTT.........................................................................2750.400.40-0.40----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTTT.......................................................................2950.401.200.40-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGAGAC.......................................................................2960.330.670.33-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTTGTT.....................................................................3140.250.250.25-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTCGT......................................................................3050.200.400.20-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTTTG......................................................................3050.201.20-0.20----------------------------------
....................................................................................................................................................TCTGTTTCTTGTTTGTTTGT..................................................................................2050.200.200.20-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGTTTTGC.....................................................................3150.201.200.20-----------------------------------
......................................................................................................................................................TGTTTCTTGTTTGTTTGTTTGTTTGC..........................................................................2660.170.670.17-----------------------------------

Antisense strand
TTGCACAACCCCCTCCAGACGGTTACTCGCCCAACTGCCTCAGAGGACAGGTAAAACAAAAACTAGAAAAAGCAAACAAGAAAAAGCAGTTTTAATGTATTCGTGTATTTTATTATGTGAGGAAAAACATTTATTGTTCTGGGGCTCTTCTGTTTCTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACGGTGTCTCGCTCTGTCGCCCAGGCTGGAGTGTAGTGGTGCGATCTCGGCTCACTGGGACCT
............................................................................................................................(((((..((.......(((((......))))).....))..)))))................................................................................
............................................................................................................................125............................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................................CGCTCTGTCGCCCAGGCTGGAGTGTCTG.......................... 283.000.002.001.00----------------------------------
.............................................................................................................................................................................................GGTGTCTCGCTCTGTCGCCCAGGCTCCCC................................ 291.000.001.00-----------------------------------
.............................................................................................................................................................................................GGTGTCTCGCTCTGTCGCCCAGGCTGGAATCC............................. 321.000.00-1.00----------------------------------
..............................................................................................................................................................................................................CCCAGGCTGGAGTGTAGTGGTGCGATCTGAC............. 311.000.00-1.00----------------------------------
..............................................ACAGGTAAAACAAAAATCCA........................................................................................................................................................................................ 201.000.00------------1.00-----------------------
..........................................................................................................................................................................................GACGGTGTCTCGCTCTGTACAC.......................................... 221.000.00-1.00----------------------------------
...................................................................................................................................................................................................TCGCTCTGTCGCCCAGGCTGGAGTGTCACC......................... 301.000.00-1.00----------------------------------
........................................................................................................................................................................................GAGACGGTGTCTCGCTCTA............................................... 191.000.00-----------------------------1.00------
............................................................................................................................................................................................................................TAGTGGTGCGATCTCGAAT........... 191.000.00--------------------------------1.00---
.......................................................ACAAAAACTAGAAAAAGCAC............................................................................................................................................................................... 201.000.00--1.00---------------------------------
........................................................................................................................................................................................................................AGTGTAGTGGTGCGATCTGTC............. 211.000.00-----------------1.00------------------
.........................................................................................................................................................................................AGACGGTGTCTCGCTATTA.............................................. 191.000.00-------------------------------1.00----
................................................................................................................................................................................................GTCTCGCTCTGTCGCCCAGGCTGGAGTGTCTG.......................... 321.000.001.00-----------------------------------
.....................................................................................................................................................................................................GCTCTGTCGCCCAGGCTGGAGTGTCTC.......................... 271.000.00-1.00----------------------------------
..............................................................................................................................................................................................GTGTCTCGCTCTGTCGCCCAGGCAGG.................................. 261.000.00----------------1.00-------------------
.............................................................................................................................................................................................GGTGTCTCGCTCTGTCGCCCAACCC.................................... 251.000.001.00-----------------------------------
............................................................................................................................................................................................CGGTGTCTCGCTCTGTCGCCCAGGCTCCC................................. 291.000.001.00-----------------------------------
.........................................................................................................................................................................................AGACGGTGTCTCGCTATTC.............................................. 191.000.00---------------------------------1.00--
.....................................................................................................................................................................................................................AGATCGCACCACTACACTCCA................ 2101.001.00---------------------1.00--------------
................................................................................................................................................................................................GTCTCGCTCTGTCGCCCAGGCTGGAGTGTCCAG......................... 331.000.001.00-----------------------------------
.......................................................................GCTTTTTCTTGTTTGC................................................................................................................................................................... 1690.110.110.11-----------------------------------