ID: uc003svo.1_intron_1_0_chr7_23143937_r.3p
GENE: AK054880(1)
chr7:23143887-23144136-


(1)
AGO1.ip OTHER.mut 		(3)
B-CELL 		(1)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(1)
OTHER 		(2)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
TCTTCTATTAATCTAGAGGTTCTCAGATGTGCCTCTATTTTAACTAGTTGATTTGGGGATTTCAGGTGAACCCTGGCAATAGGAATAATTTATTGTTAATAAAATTATAAATGAGAAAATTTTTCATTCACTTTATTAAATGACCCAGGACACTGAAGAAAAACGGAATAAATTTTTTTCTTTTTTTTTTAATTGAAAAGAAGTAGAAATCTGTCTTCTAACTCTAAGGCCTTGGGAGATGAAGGATCCG
.........................................................................................................................................................((((((((((.((((........)))).))))))))))...........................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532874(GSM532874)
G699T. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)
............................................................................................................................................................................TTTTTTTCTTTTTTTTTTAATTCTG.....................................................257.000.00-2.001.00--2.00-2.00------------
.............................................................................................................................................................................TTTTTTCTTTTTTTTTTACG.........................................................203.000.00-3.00------------------
........................................................................................................................................................................TAAATTTTTTTCTTTTTTTTTAAG..........................................................243.000.00-2.00-1.00----------------
........................................................................................................................................................................TAAATTTTTTTCTTTTTTTTTTAAG.........................................................253.000.00-1.001.001.00----------------
........................................................................................................................................................................TAAATTTTTTTCTTTTTTTTTTTAAG........................................................263.000.00--1.001.00---1.00------------
....................................................................................................................................................GACACTGAAGAAAAACGGAAT.................................................................................2112.002.00---------2.00----------
........................................................................................................................................................................TAAATTTTTTTCTTTTTTTTTGGTC.........................................................252.000.002.00-------------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAATATTT.....................................................272.000.002.00-------------------
.................................................................................................................................................CAGGACACTGAAGAACGC.......................................................................................182.000.00--------------1.00-1.00---
.............................................................................................................................................................................TTTTTTCTTTTTTTTTTAATTG.......................................................2261.171.17-----0.50-0.67------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAATTTG......................................................261.000.00--1.00-----------------
........................................................................................................................................................................TAAATTTTTTTCTTTTTTTTTTTGAG........................................................261.000.00------1.00-------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTACCAG.......................................................211.000.00--1.00-----------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTACGGG.......................................................241.000.001.00-------------------
.......................................................................................................................................................................ATAAATTTTTTTCTTTTTTTG..............................................................211.000.00-1.00------------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAAACTG......................................................251.000.00-----1.00--------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAAACTG......................................................261.000.00-----1.00--------------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTAAAG...........................................................221.000.00-----1.00--------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTACACA.......................................................211.000.00---1.00----------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAACTTT......................................................261.000.00--1.00-----------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAATTTAAG....................................................271.000.00--1.00-----------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTATTTG.......................................................251.000.00-1.00------------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAGTG........................................................241.000.001.00-------------------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTTTTGGC.........................................................241.000.001.00-------------------
..........................................................................................................................................................................................................................................GGAGATGAAGGATCCGAGCC201.000.00-----------1.00--------
............................................................................................................................................TGACCCAGGACACTGCGT............................................................................................181.000.00------------1.00-------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTTAATTAACA....................................................281.000.00--1.00-----------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTCAAG.........................................................231.000.00--1.00-----------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAATTTAGG....................................................271.000.001.00-------------------
......................................................................................................................................................................................................AGAAGTAGAAATCTGGGCC.................................191.000.00-------------1.00------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTACG.........................................................191.000.00---1.00----------------
......................................................................................................................ATTTTTCATTCACTTTATTACG..............................................................................................................221.000.00--------1.00-----------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTTTTTGCC........................................................251.000.001.00-------------------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTTTTTGC.........................................................241.000.001.00-------------------
..........................................................................................................................................................................AATTTTTTTCTTTTTTTTTGCTG.........................................................231.000.001.00-------------------
............................................................................................................................................................................TTTTTTTCTTTTTTTTTTAAATAG......................................................241.000.00---1.00----------------
.....................................................................................................................................................ACACTGAAGAAAAACGAAAC.................................................................................201.000.00------1.00-------------
................................................TGATTTGGGGATTTCACATG......................................................................................................................................................................................201.000.00----------1.00---------
.............................................................................................................................................................................TTTTTTCTTTTTTTTTTAAAATG......................................................231.000.00---1.00----------------
.......................................................................................................................................................................ATAAATTTTTTTCTTTTTTTTTCTT..........................................................251.000.00---1.00----------------
...............................................................................................................................................................................TTTTCTTTTTTTTTTAATTATAG....................................................231.000.00-----1.00--------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTACAG........................................................231.000.00------1.00-------------
.........AATCTAGAGGTTCTCCCGC..............................................................................................................................................................................................................................191.000.001.00-------------------
...........................................................................................................................................................................................................TAGAAATCTGTCTTCTAACTCTAAGGCC...................2811.001.00---------------1.00----
.................................................................................................................................................CAGGACACTGAAGAAAAACGG....................................................................................2111.001.00------------------1.00-
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAATTTAG.....................................................261.000.00------1.00-------------
................................................................................................................................................................................TTTCTTTTTTTTTTAATTGTTAG...................................................231.000.00------1.00-------------
............................................................................................................................................................................TTTTTTTCTTTTTTTTTTAATTCAAG....................................................261.000.00-1.00------------------
......................................................................................................................................................................AATAAATTTTTTTCTTTTTTTTTTCT..........................................................261.000.00---1.00----------------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTTTTATG.........................................................2420.500.50-0.50------------------
.........................................................................................................................................................................AAATTTTTTTCTTTTTTTTTTA...........................................................2220.500.500.50-------------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTAATTG.......................................................2180.500.50-0.12---0.12-0.25------------
............................................................................................................................................................................TTTTTTTCTTTTTTTTTTAATTG.......................................................2340.250.25-------0.25------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAAT.........................................................2280.120.12-----0.12--------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTAATTGTTT....................................................2480.120.50---0.12----------------
...........................................................................................................................................................................ATTTTTTTCTTTTTTTTTTAATGG.......................................................2480.120.12-----0.12--------------

Antisense strand
TCTTCTATTAATCTAGAGGTTCTCAGATGTGCCTCTATTTTAACTAGTTGATTTGGGGATTTCAGGTGAACCCTGGCAATAGGAATAATTTATTGTTAATAAAATTATAAATGAGAAAATTTTTCATTCACTTTATTAAATGACCCAGGACACTGAAGAAAAACGGAATAAATTTTTTTCTTTTTTTTTTAATTGAAAAGAAGTAGAAATCTGTCTTCTAACTCTAAGGCCTTGGGAGATGAAGGATCCG
.........................................................................................................................................................((((((((((.((((........)))).))))))))))...........................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532874(GSM532874)
G699T. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)
.....TATTAATCTAGAGGTCT.................................................................................................................................................................................................................................... 177.000.00----7.00---------------
......................................................................CCCTGGCAATAGGAACTTT................................................................................................................................................................. 191.000.00-----------------1.00--
....................................................................................................................................................................................TTTTTTTTTTAATTGAAAAGATA............................................... 231.000.00--1.00-----------------
....................................................................AACCCTGGCAATAGGAATGCC................................................................................................................................................................. 211.000.00-------------------1.00
..........................................................................................................................................................................................TTTTAATTGAAAAGAAGTTAAG.......................................... 221.000.00--------1.00-----------