| (2) BREAST | (8) CELL-LINE | (1) FIBROBLAST | (2) HEART | (1) LIVER | (3) OTHER | (1) SKIN |
| AGATTTCATAAAAATAATTGCAATATTTGCCTGTTTCATTAATGTAGAGTCAATGCCTCATTTATGTGCTTGGGTTTTTCATTTGAGAATGAGAATGGACCAAGAAAAGGGTGAGACTTTTTTTTTTTTTAACACATGAGCAATTGGCTCTCTATTTTTTTAATTTTTATCTATTTTTTTTTTTTTGTCTCAATCCCCAGCCTCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAAAGTGGCA ............................................................................................................((((((((.....................((((.....))))..((......))..)))))))).............................................................................. ............................................................................................................109.............................................................173........................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | TAX577588(Rovira) total RNA. (breast) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR191434(GSM715544) 171genomic small RNA (size selected RNA from . (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................CTCTCTATTTTTTTAATTTAAG................................................................................. | 22 | 101.00 | 0.00 | 66.00 | 29.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....................................................................................................................................................TCTCTATTTTTTTAATTTAAG................................................................................. | 21 | 6.00 | 0.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................AGACTTTTTTTTTTTTTAGTGG................................................................................................................... | 22 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACAAAAG.............................................................................................................. | 25 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................TTTATCTATTTTTTTTTTTTTTGCC............................................................ | 25 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................GTTTTTCATTTGAGAATGAGAATGGACC..................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CTCTCTATTTTTTTAATTTAGG................................................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................TGAGACTTTTTTTTTTTCACA...................................................................................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................AGACTTTTTTTTTTTTTAAAGGG.................................................................................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTATCTATTTTTTTTTTTTTCTTG............................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTATCTATTTTTTTTTATAT................................................................ | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................CTTTTTTTTTTTTTAACACCAAG............................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................CTTTTTTTTTTTTTAACACTCG................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ......................................................................................................................................................................TTATCTATTTTTTTTTTTTCTAG............................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACAG................................................................................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACG.................................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACACCAG.............................................................................................................. | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACAATAA.............................................................................................................. | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TTTTTTTTTTTGTCTCAACAA...................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTATCTATTTTTTTTTTTTCTTG............................................................. | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTTTTTTTTTTGTCTCAATTCAC.................................................... | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................TTTTAATTTTTATCTATTTTTG....................................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................TATTTTTTTTTTTTTGTCTCACCCT...................................................... | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................AGACTTTTTTTTTTTTTACTCC................................................................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTTTGTCTCAACACC..................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................AGACTTTTTTTTTTTTTAACAGGGC................................................................................................................ | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................TTTATCTATTTTTTTTTTTTTTCG............................................................. | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTTTTTTTTTTTGTCGGCT......................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTTTTTTTTTTGTCTCAATGGG..................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................TCTATTTTTTTTTTTTTGTGGTC.......................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACACAACAC.............................................................................................................. | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................CTCTCTATTTTTTTAATTTAA.................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ACTTTTTTTTTTTTTAACAATTG................................................................................................................ | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................TATCTATTTTTTTTTTTTTCCG............................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................CTCTCTATTTTTTTAATTTAAT................................................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTTTTGTCTCAATCCCCAGCCTC.............................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................CTTTTTTTTTTTTTAACACCCAA............................................................................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................GTGCTTGGGTTTTTCATTTAAA................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .....................................................................................................................................................................TTTATCTATTTTTTTTTTTTCTTG............................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................TTTATCTATTTTTTTTTTTTAGA.............................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................AGAATGAGAATGGACCA.................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| AGATTTCATAAAAATAATTGCAATATTTGCCTGTTTCATTAATGTAGAGTCAATGCCTCATTTATGTGCTTGGGTTTTTCATTTGAGAATGAGAATGGACCAAGAAAAGGGTGAGACTTTTTTTTTTTTTAACACATGAGCAATTGGCTCTCTATTTTTTTAATTTTTATCTATTTTTTTTTTTTTGTCTCAATCCCCAGCCTCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAAAGTGGCA ............................................................................................................((((((((.....................((((.....))))..((......))..)))))))).............................................................................. ............................................................................................................109.............................................................173........................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | TAX577588(Rovira) total RNA. (breast) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR191434(GSM715544) 171genomic small RNA (size selected RNA from . (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................AATCCCCAGCCTCTGTTTT........................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ............................................................................................................................................................................................CTCAATCCCCAGCCTCTTAGG......................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGCCTCTGAGCCCAACTG.................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .........AAAAATAATTGCAATATTG.............................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...........................................................................................................................................................................TATTTTTTTTTTTTTGTCAAAC......................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |