| (1) AGO2.ip | (1) BREAST | (11) CELL-LINE | (3) HEART | (6) HELA | (4) OTHER | (3) SKIN |
| TAGTTAATGAGGATTTCCTGTGGAACAACTACATTCCAGACAGCATCCAGGTTGACAAATTACAACACTAATACTGCAAGTGAAGCTTTAAGAAGAAATGTGTATTTTATCATTATGTCTTATAAACTTTTTATGTAAAAAATTTTTTGGTAAATTAGTTTTTAAATGATTCAATTTTCAATAACTATGATAAAAACAATAATTAATTGAAAGTTTGTTGAGATTGCTAAGCAATTTTTTATATATCACTAAATATAATTAATGGTAATATTTACCAAAAATATCTTTGCTTTTAAGATCAAAGTAAAGGATGTCCCAACTGCTTACTGCTATACATTTACTGACCC ......................................................................................................................................................................((((..((((((((((((.(((..........))).))).)))))))))....((((((((...))))))))......))))..............(((((.....)))))...................................................................... ....................................................................................................................................................................165....................................................................................................................284............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR037935(GSM510473) 293cand3. (cell line) | SRR189784 | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR343335 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | GSM359173(GSM359173) hela_10_1. (hela) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM359174(GSM359174) hela_5_1. (hela) | SRR029129(GSM416758) SW480. (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | SRR189785 | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR444057(SRX128905) Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM359177(GSM359177) hela_nucl_a. (hela) | SRR029127(GSM416756) A549. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................TTAAATGATTCAATTTTCAATAACTATGATA........................................................................................................................................................... | 31 | 1 | 28.00 | 28.00 | 13.00 | 9.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TTTAAATGATTCAATTTTCAATAACTATGATA........................................................................................................................................................... | 32 | 1 | 24.00 | 24.00 | 12.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................CTGTGGAACAACTACATTCCAGA................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTCAATTTTCAATAACTATGATA........................................................................................................................................................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TTTAAATGATTCAATTTTCAATAACT................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................TTCAATTTTCAATAACTATGATAAAA........................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................TTAAATGATTCAATTTTCAATAACTATGAT............................................................................................................................................................ | 30 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GATTTCCTGTGGAACTCTG............................................................................................................................................................................................................................................................................................................................. | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................................................TGGTAATATTTACCAACC................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................ATTTTCAATAACTATGATA........................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....AATGAGGATTTCCTGTGGAAC................................................................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................AAAAACAATAATTAATTTTT........................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................ATAATTAATTGAAAGGGGT.................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................AGGATGTCCCAACTGCTTACTGCTACAC............ | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................TTAAATGATTCAATTTTCAATAACTA................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TTTAAATGATTCAATTTTCAATAACTATGCTA........................................................................................................................................................... | 32 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TTCAATAACTATGATAAAA........................................................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ..........GGATTTCCTGTGGAAC................................................................................................................................................................................................................................................................................................................................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ............................................................TACAACACTAATACT................................................................................................................................................................................................................................................................................ | 15 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TAGTTAATGAGGATTTCCTGTGGAACAACTACATTCCAGACAGCATCCAGGTTGACAAATTACAACACTAATACTGCAAGTGAAGCTTTAAGAAGAAATGTGTATTTTATCATTATGTCTTATAAACTTTTTATGTAAAAAATTTTTTGGTAAATTAGTTTTTAAATGATTCAATTTTCAATAACTATGATAAAAACAATAATTAATTGAAAGTTTGTTGAGATTGCTAAGCAATTTTTTATATATCACTAAATATAATTAATGGTAATATTTACCAAAAATATCTTTGCTTTTAAGATCAAAGTAAAGGATGTCCCAACTGCTTACTGCTATACATTTACTGACCC ......................................................................................................................................................................((((..((((((((((((.(((..........))).))).)))))))))....((((((((...))))))))......))))..............(((((.....)))))...................................................................... ....................................................................................................................................................................165....................................................................................................................284............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR037935(GSM510473) 293cand3. (cell line) | SRR189784 | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR343335 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | GSM359173(GSM359173) hela_10_1. (hela) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM359174(GSM359174) hela_5_1. (hela) | SRR029129(GSM416758) SW480. (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | SRR189785 | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR444057(SRX128905) Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM359177(GSM359177) hela_nucl_a. (hela) | SRR029127(GSM416756) A549. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................................................ATTAATGGTAATATTCAG........................................................................ | 18 | 3.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................AGTTTGTTGAGATTGCCC...................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........AGGATTTCCTGTGGAAAATA.............................................................................................................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................AAAATTTTTTGGTAAATAG.............................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................CTGCTTACTGCTATACATCG........ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |