| (2) BREAST | (7) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (2) HEART | (2) HELA | (1) LIVER | (2) OTHER | (2) SKIN | (1) TESTES | (1) XRN.ip |
| TTCATTAGACTTTGGGCTTCTTGGGTGGGCCTGTGTCCTGAGGACACTTCTGTCTTGCAAAGAGAAGTCCACACAGGTTTAATGACTTCCCTAGAGGCCTACTCTCTTGGCCCAGAATAGGCAGATTAATATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCCTAGGCACAGTACCACCTGATGCTGCACATCCAGATGCAGCTGTGTGAGCTCTC ...............................................................................................((((.........)))).....((((.(((...((((.((.(((((...........((((.....))))...........))))).))..))))..)))))))................................................... ..................................................................................83...................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR040037(GSM532922) G243T. (cervix) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR553576(SRX182782) source: Testis. (testes) | TAX577738(Rovira) total RNA. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | TAX577743(Rovira) total RNA. (breast) | SRR343334 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................TATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCCTAG.................................................. | 71 | 1 | 12.00 | 12.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................TATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCC..................................................... | 68 | 1 | 12.00 | 12.00 | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GATGGGAGCCATCACTGTGTCCTCTCCTAG.................................................. | 30 | 1 | 8.00 | 8.00 | - | - | - | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCCT.................................................... | 69 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................AATATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTC...................................................... | 69 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCCTA................................................... | 64 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................AGATGGGAGCCATCACTGTGTCCTC........................................................ | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................AGATGCAGCTGTGTGAGCTCTC | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TCCCTAGAGGCCTACGATC................................................................................................................................................ | 19 | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....................................................................................................................................................................................................................................AGATGCAGCTGTGTGAGCTCT. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGGGCTTCTTGGGTGGGCCTGTGCCC.................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................AGATGCAGCTGTGTGAGCTC.. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TCCCTAGAGGCCTACTGGC................................................................................................................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................AGATGCAGCTGTGTGAG..... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................CCAGATGCAGCTGTGTGAGC.... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................TCCCTAGAGGCCTACGAGC................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ...............................................................................................................................AATATTTGTTGGCTAAATGAATAATGCTAG............................................................................................. | 30 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................GTGAATCGTGCAAAGATGGGAGCA...................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ................................................................................................................................................................................................................................ATCCAGATGCAGCTGTGTGAGCT... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................TCCCTAGAGGCCTACGGTT................................................................................................................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TCCCTAGAGGCCTACTGTT................................................................................................................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...ATTAGACTTTGGGCTTCTTGGGTGGGC............................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................GTGAATCGTGCAAAGATGGGAGCC...................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................TCCCTAGAGGCCTACAGTT................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| TTCATTAGACTTTGGGCTTCTTGGGTGGGCCTGTGTCCTGAGGACACTTCTGTCTTGCAAAGAGAAGTCCACACAGGTTTAATGACTTCCCTAGAGGCCTACTCTCTTGGCCCAGAATAGGCAGATTAATATTTGTTGGCTAAATGAATAATGCGAGTGAATCGTGCAAAGATGGGAGCCATCACTGTGTCCTCTCCTAGGCACAGTACCACCTGATGCTGCACATCCAGATGCAGCTGTGTGAGCTCTC ...............................................................................................((((.........)))).....((((.(((...((((.((.(((((...........((((.....))))...........))))).))..))))..)))))))................................................... ..................................................................................83...................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR040037(GSM532922) G243T. (cervix) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR553576(SRX182782) source: Testis. (testes) | TAX577738(Rovira) total RNA. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | TAX577743(Rovira) total RNA. (breast) | SRR343334 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................CACTGTGTCCTCTCCGCCC................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................CCTCTCCTAGGCACAGTTCAG....................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................AGATGGGAGCCATCACTGTGTCTG......................................................... | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TCTTTGCAAGACAGAA........................................................................................................................................................................................... | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |