ID: uc003sna.1_intron_6_0_chr7_4795015_f.3p
GENE: FOXK1(7)
chr7:4796425-4796674+


(1)
AGO2.ip 		(4)
B-CELL 		(1)
BRAIN 		(3)
BREAST 		(1)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(1)
LIVER 		(7)
OTHER 		(5)
SKIN 		(1)
TESTES

Sense strand
GCGGTGTCAAATTTTGATAGGAATGACCTGCCCTGTGCCTCGGTGCTGCTCCCGTGAGGCCCAGCCAGCACAGCACCAAGGGCTCTGCACAGAGGGACGGCCTCCCCTCACCCTGGTCCCGCATCTGCTGCAGATTTGAGGTGGGTGGGACTCATTTTCTGATTTGCTGGTGATGGGTGAATATCTCTGCTTCCCTGCAGAATTCTATCCGGCACAACCTCTCTTTGAACCGTTACTTTATCAAAGTCCC
...........................................................................................((((.....))))..(((((((....((((.(((((...))))).)).)).))))))).....................................................................................................
......................................................................................87............................................................149...................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343334SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)
..............................................................................................................................GCTGCAGATTTGAGGAAGC.........................................................................................................1999.000.0034.0031.0024.006.00----2.00--------------1.00-1.00-
....................................................................................................................................................................................................................CACAACCTCTCTTTGAACCGTTACTTA...........272.000.00---2.00-----------------------
......................................................................................................................................................................................................................................CGTTACTTTATCAAAG....1612.002.00---2.00-----------------------
.......................................................................................................................................................................................................GAATTCTATCCGGCACAACCTCTCTTTG.......................2811.001.00----1.00----------------------
........................................................................................................................................................................................................AATTCTATCCGGCACAACCTCTCTCTG.......................271.000.00---1.00-----------------------
........................................................................................................................................................................................................AATTCTATCCGGCACAACCTCTCTTT........................2611.001.00---------------1.00-----------
................................................................................................................................................................................................................................TTGAACCGTTACTTTATCAAAGTCCC2611.001.00--------------------1.00------
.............................................................................................................................................................................................................TATCCGGCACAACCTCTCTTTG.......................2211.001.00---------1.00-----------------
...............................................................................................................................................................................................................................TTTGAACCGTTACTTTATC........1911.001.00-------------1.00-------------
.................................................................................................................................................................................................................................TGAACCGTTACTTTATCAAAG....2111.001.00--1.00------------------------
...................................................................................................................................................................................................TGCAGAATTCTATCCTCC.....................................181.000.00-----1.00---------------------
...................................................................................................................................................................................................................................AACCGTTACTTTATCAAAG....1911.001.00--1.00------------------------
....................................................................................................................................................................................................GCAGAATTCTATCCGGCA....................................1811.001.00------------------1.00--------
....................................................................................................................................................................................................GCAGAATTCTATCCGGCACAACCT..............................2411.001.00----1.00----------------------
...........................................................................................GAGGGACGGCCTCCCGCC.............................................................................................................................................181.000.00----------------1.00----------
.............................................................................AAGGGCTCTGCACAGGTG...........................................................................................................................................................181.000.00----------1.00----------------
.......................................................................................................................................................................................................................AACCTCTCTTTGAACTCTG................191.000.00------1.00--------------------
..............................................................................................................................................................................................TTCCCTGCAGAATTCTATCCGGCACA..................................2611.001.00----------------------1.00----
....................................................................................................................................................................TGCTGGTGATGGGTGTCT....................................................................181.000.00------------1.00--------------
...............................................................................................................................................................................................................TCCGGCACAACCTCTCTTTGA......................2111.001.00----1.00----------------------
..................................................................................................................................................................................................................GGCACAACCTCTCTTTGAACCG..................2211.001.00----1.00----------------------
.......................................................................................................................................................................................................GAATTCTATCCGGCACAACCTCTC...........................2411.001.00----1.00----------------------
.....................................................................................................................................................................................................CAGAATTCTATCCGGCACAACC...............................2211.001.00------------------------1.00--
.............................................................................AAGGGCTCTGCACAGAG............................................................................................................................................................1711.001.00------1.00--------------------
.................................................................................................................................................................................................................CGGCACAACCTCTCTTTGAACC...................2211.001.00----1.00----------------------
....................................................................................................................................................................................................GCAGAATTCTATCCGGCACA..................................2011.001.00------1.00--------------------
.....................................................................................................................................................................................................CAGAATTCTATCCGGCA....................................1711.001.00-------------------1.00-------
.........................................................................................................................................................................GTGATGGGTGAATATCTCTG.............................................................2011.001.00-----------1.00---------------
......................................................................................................................................................................................................AGAATTCTATCCGGCAC...................................1711.001.00-----------------1.00---------
..................................................................AGCACAGCACCAAGGGCTCTGCACAGAGGGACG.......................................................................................................................................................3311.001.00---------------------1.00-----
.......................................................................................................................................................................................................GAATTCTATCCGGCACAACCTCTCT..........................2511.001.00---------1.00-----------------
...........................CTGCCCTGTGCCTCGGT..............................................................................................................................................................................................................1750.200.20-----0.20---------------------

Antisense strand
GCGGTGTCAAATTTTGATAGGAATGACCTGCCCTGTGCCTCGGTGCTGCTCCCGTGAGGCCCAGCCAGCACAGCACCAAGGGCTCTGCACAGAGGGACGGCCTCCCCTCACCCTGGTCCCGCATCTGCTGCAGATTTGAGGTGGGTGGGACTCATTTTCTGATTTGCTGGTGATGGGTGAATATCTCTGCTTCCCTGCAGAATTCTATCCGGCACAACCTCTCTTTGAACCGTTACTTTATCAAAGTCCC
...........................................................................................((((.....))))..(((((((....((((.(((((...))))).)).)).))))))).....................................................................................................
......................................................................................87............................................................149...................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343334SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)
...........................................................................................................TCACCCTGGTCCCGCAAACG........................................................................................................................... 201.000.00-----1.00---------------------
..........................................................................................................CTCACCCTGGTCCCGCATGGT........................................................................................................................... 211.000.00-----1.00---------------------
...............................................................................................................................................................................................TCCCTGCAGAATTCTTGTG........................................ 191.000.00--1.00------------------------
..........................................................................................................CTCACCCTGGTCCCGCATGGG........................................................................................................................... 211.000.00--------------------------1.00
....................................................................................................................................................................TGCTGGTGATGGGTGATTTG.................................................................. 201.000.00-------1.00-------------------
...........................................................................................................TCACCCTGGTCCCGCAACAG........................................................................................................................... 201.000.00--------------1.00------------
...........................................................CCCAGCCAGCACAGCAGGCG........................................................................................................................................................................... 201.000.00-------1.00-------------------