ID: uc003qxo.1_intron_5_0_chr6_170667407_f.5p
GENE: FAM120B(6)
chr6:170667357-170667606+


(1)
AGO2.ip
(9)
BRAIN
(9)
BREAST
(7)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
LIVER
(1)
OTHER
(4)
SKIN
(1)
XRN.ip

Sense strand
AGGCCTTGTGCCTCCAAGGAAAATCCACCTCGCAGCTTGTAAATCTACAGGTACAGACGTGACCAGTTAGTTGTCACTGCCCGGAAGACAGCTGTGCAGTCCAGCCTTCTCTTTCCCATTATAGTTGAAGTTTCACAGAAAAGATCAGGAAGGTATTTTAGTCAGGATCTTTTCGTGATGCAGTAGTTTGTCTTCGTCTCTTTAATGGCTCTGGGATGAGCAGCCAGATGAGGTACTAATAGGTGCTGCC
.........................................................................................................................................(((((((((..((...........))..)))))))))..((((.((........)).))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577742(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334SRR189784SRR037937(GSM510475)
293cand2. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577580(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR343335SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
...............................................................................................................................................................................TGATGCAGTAGTTTGTACAG.......................................................2041.000.0037.00--2.00-1.00----1.00-------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATAG.......................................................209.000.008.00-------------1.00---------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTATTT.....................................................224.000.00--1.001.00-------1.00------------------------1.00-----
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTAGTT.....................................................224.000.00-1.001.00-----------1.00------------1.00--------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTAAAG.......................................................203.000.003.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTTTAG.......................................................203.000.003.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTACAT.......................................................203.000.003.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATAA.......................................................202.000.002.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTACA........................................................192.000.001.00-1.00---------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTACAA.......................................................202.000.002.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTGGTT.....................................................222.000.00----------1.00------------------------1.00------
...............................................................................................................................................................................TGATGCAGTAGTTTGACGG........................................................192.000.00----2.00-------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTCGTT.....................................................221.000.00-1.00----------------------------------------
.............................TCGCAGCTTGTAAATACGG..........................................................................................................................................................................................................191.000.001.00-----------------------------------------
.............................................................................................................................................AGATCAGGAAGGTATTTTAGCCAG.....................................................................................241.000.00--------------------------1.00---------------
..................................................................................................................................................................CAGGATCTTTTCGTGATGC.....................................................................1911.001.00---------------1.00--------------------------
..................................................................................................................................................................................................................................GATGAGGTACTAATAGG.......1711.001.00----------------------------1.00-------------
.................................................................................................................................................CAGGAAGGTATTTTAGTCAGGATC.................................................................................2411.001.00------------------------------1.00-----------
.....................................................................................................................................................................................................CTCTTTAATGGCTCTAATA..................................191.000.00-----1.00------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTGATT.....................................................221.000.00---1.00--------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGCAG.......................................................201.000.001.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTCGT......................................................211.000.00-1.00----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCCGCT......................................................211.000.00-----------------1.00------------------------
..............................................................................................TGCAGTCCAGCCTTCTCTTTCCCACT..................................................................................................................................261.000.00-------------------------1.00----------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTGGTA.....................................................221.000.00------------1.00-----------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTAGT......................................................211.000.00---------1.00--------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGTGT.......................................................201.000.00-1.00----------------------------------------
................................................................................................................................AGTTTCACAGAAAAGATCAGGAAGTAG...............................................................................................271.000.00-----------------------------1.00------------
.............................TCGCAGCTTGTAAATATTG..........................................................................................................................................................................................................191.000.00-----1.00------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGCTT.......................................................201.000.001.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGCCG.......................................................201.000.001.00-----------------------------------------
...........................................TCTACAGGTACAGACGTG.............................................................................................................................................................................................1811.001.00-------1.00----------------------------------
.GGCCTTGTGCCTCCAAGGCTA....................................................................................................................................................................................................................................211.000.00------1.00-----------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGTA........................................................191.000.00-------------1.00----------------------------
.............................TCGCAGCTTGTAAATAGG...........................................................................................................................................................................................................181.000.00------1.00-----------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGCCTA........................................................191.000.00-1.00----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTACCT.......................................................201.000.001.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATAT.......................................................201.000.001.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTGTTT.....................................................221.000.00--------------------------------1.00---------
..........................................................................................................................................................................................................TAATGGCTCTGGGATACT..............................181.000.00---------------------1.00--------------------
............................................................................CTGCCCGGAAGACAGCTGTG..........................................................................................................................................................2011.001.00----------------------------------1.00-------
...............................................................................................................................................................................TGATGCAGTAGTTTGTGCT........................................................191.000.00--1.00---------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCCCA.......................................................201.000.001.00-----------------------------------------
...................................................................................................................................................................................................GTCTCTTTAATGGCTCTGGGATGAGCAGCC.........................3011.001.00------------------1.00-----------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTAGGT.....................................................221.000.00---------------------------------1.00--------
................................................................................CCGGAAGACAGCTGTGAGGG......................................................................................................................................................201.000.00-----------------------1.00------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATAC.......................................................201.000.001.00-----------------------------------------
.....................................................................................................................................................................................AGTAGTTTGTCTTCGTCTCTTT...............................................2211.001.00--------------------1.00---------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGGACC........................................................191.000.00----------------------1.00-------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTGGAT.....................................................221.000.00------------1.00-----------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTTTGG.......................................................201.000.00--------1.00---------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATGG.......................................................201.000.00--------1.00---------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTAG.......................................................201.000.001.00-----------------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTCG.......................................................201.000.00----------------------------------------1.00-
...............................................................................................................................................................................TGATGCAGTAGTTTGTCTTGTT.....................................................221.000.00-------1.00----------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTATCG.......................................................201.000.001.00-----------------------------------------
...........................................................................................................................................AAAGATCAGGAAGGTATTT............................................................................................1911.001.00-----------------------------------------1.00
...............................................................................................................................................................................................................GCTCTGGGATGAGCAGCCAGATG....................2311.001.00-------------------------------------1.00----
.................................................................................CGGAAGACAGCTGTGCAGT......................................................................................................................................................1911.001.00----------------1.00-------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTCCAGT......................................................211.000.00-----------1.00------------------------------
...............................................................................................................................................................................TGATGCAGTAGTTTGTACG........................................................191.000.001.00-----------------------------------------
.........................................................................................................................................................TATTTTAGTCAGGATC.................................................................................1611.001.00--------------------------------------1.00---

Antisense strand
AGGCCTTGTGCCTCCAAGGAAAATCCACCTCGCAGCTTGTAAATCTACAGGTACAGACGTGACCAGTTAGTTGTCACTGCCCGGAAGACAGCTGTGCAGTCCAGCCTTCTCTTTCCCATTATAGTTGAAGTTTCACAGAAAAGATCAGGAAGGTATTTTAGTCAGGATCTTTTCGTGATGCAGTAGTTTGTCTTCGTCTCTTTAATGGCTCTGGGATGAGCAGCCAGATGAGGTACTAATAGGTGCTGCC
.........................................................................................................................................(((((((((..((...........))..)))))))))..((((.((........)).))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577742(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334SRR189784SRR037937(GSM510475)
293cand2. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577580(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR343335SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
...................................................................................................................................................................................GCAGTAGTTTGTCTTCGA..................................................... 181.000.00---------1.00--------------------------------
...................................................................................................................................................................................GCAGTAGTTTGTCTTCGAA.................................................... 191.000.00-------------1.00----------------------------
......................ATCCACCTCGCAGCTTA................................................................................................................................................................................................................... 171.000.00-------------------1.00----------------------
..................................................................................................................................................AGGAAGGTATTTTAGACAG..................................................................................... 191.000.00----1.00-------------------------------------
........................................................................................................................................AGAAAAGATCAGGAAGGTATTT............................................................................................ 221.000.00------1.00-----------------------------------
...........................................................................................................................................................................................................................GCAGCCAGATGAGGTACG............. 181.000.00------------------------1.00-----------------
...................................................................................................................................................................................GCAGTAGTTTGTCTTGA...................................................... 171.000.00-------------------------------1.00----------
........................................................................................................CCTTCTCTTTCCCATGAT................................................................................................................................ 181.000.00-------1.00----------------------------------
.......................CAAGCTGCGAGGTGGA................................................................................................................................................................................................................... 1611.001.00---------------------------------------1.00--