ID: uc003qxm.2_intron_9_0_chr6_170598897_r
GENE: (1)
chr6:170598847-170599223-


(2)
AGO2.ip
(1)
B-CELL
(3)
BRAIN
(16)
BREAST
(11)
CELL-LINE
(26)
CERVIX
(2)
FIBROBLAST
(4)
HEART
(1)
HELA
(2)
OTHER
(44)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GCAGTCGGTGCGCGCTGGCCCTGGCGGTGCTCTCGGCCTTGCTGTGTCAGGTAGGCGGGCAGGTGGGGGCGCCGCGGCCCCGCGGGGTCTCACGGGTAGCCGGGGCGCGGGGCAGGAGCGCGCGGGGAGGGGCGGACAGCGGCACGGGCCGCGCCAGCCACGGCCCGGAAGATGAATCCCGGGGGCGACGACCCCAGCGCCGGCCGTGCAGCGAGCGCGCTCGGCCCCTGAGCCCTTCCAGGCTCTCCGCACACCCCCCACCCAGGCCTCACGCCCCCTAGCTCGGGCGGGACCCGCGTCCTCACGCCCCCGCCCTCCCCCGTGCAGGTCTGGAGCTCTGGGGTGTTCGAACTGAAGCTGCAGGAGTTCGTCAACAA
.....................................................................................................................................................................................................................................(((((......)))))...((((............(((.....))).........(((((((....((((....)))).)))))))......))))....................................................
...................................................................................................................................................................................................................................228................................................................................................327................................................
SizePerfect hitTotal NormPerfect NormSRR040032(GSM532917)
G603N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
SRR040018(GSM532903)
G701N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040040(GSM532925)
G612N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040015(GSM532900)
G623T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532881(GSM532881)
G696N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR189783GSM532880(GSM532880)
G659T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040006(GSM532891)
G601N. (cervix)
SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCCCG....................................................1949.000.008.007.00-5.004.003.00--2.003.00-3.00-3.00-2.00----2.00---2.001.00--------1.00-1.00-------------------1.00-1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCCGG....................................................192.000.00-1.00------1.00----------------------------------------------------------------------------------------------------------
............................................TGTCAGGTAGGCGGGCGGCC.........................................................................................................................................................................................................................................................................................................................202.000.00------------2.00------------------------------------------------------------------------------------------------------
....................................................................GCGCCGCGGCCCCGCGGACGC................................................................................................................................................................................................................................................................................................212.000.00------2.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCCCA....................................................191.000.00-------------------------------------------------------------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................GCTCTGGGGTGTTCGAACTGAAG....................2311.001.00-----------------1.00-------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGA.................................................................................................................................................................................................................................................................................................161.000.00--1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................GAATCCCGGGGGCGAGGG..........................................................................................................................................................................................181.000.00---------------------------------------------------1.00---------------------------------------------------------------
.............................................................................CCCCGCGGGGTCTCACC...........................................................................................................................................................................................................................................................................................171.000.00--------------1.00----------------------------------------------------------------------------------------------------
............CGCTGGCCCTGGCGGAG............................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................AACTGAAGCTGCAGGAGTTCGTC.....2311.001.00-------------------1.00-----------------------------------------------------------------------------------------------
.................GCCCTGGCGGTGCTCTGCT.....................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................ACCCCCCACCCAGGCCTGGAG........................................................................................................211.000.00------------1.00------------------------------------------------------------------------------------------------------
..................................................GTAGGCGGGCAGGTGGGGGTAAG................................................................................................................................................................................................................................................................................................................231.000.00----------------------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................GCTCTGGGGTGTTCGAACTGAAGCTGCAGG.............3011.001.00-----------------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCCAC....................................................191.000.00--1.00----------------------------------------------------------------------------------------------------------------
......................................................................................................................CGCGCGGGGAGGGGCGGGGGC..............................................................................................................................................................................................................................................211.000.00--1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................GGGGAGGGGCGGACAATT............................................................................................................................................................................................................................................181.000.00------------------------------------------------------------1.00------------------------------------------------------
................GGCCCTGGCGGTGCTTCA.......................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................................................................................................ACGCCCCCGCCCTCCCTC........................................................181.000.00--------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCCTG....................................................191.000.001.00------------------------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGGCGC..............................................................................................................................................................................................................................................................................................191.000.00---------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCCACG....................................................191.000.00-----1.00-------------------------------------------------------------------------------------------------------------
....................................................................GCGCCGCGGCCCCGCGCGCG.................................................................................................................................................................................................................................................................................................201.000.00--1.00----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................GTGTTCGAACTGAAGCTGC................1911.001.00-----------------------------------------1.00-------------------------------------------------------------------------
......GGTGCGCGCTGGCCCCTG.................................................................................................................................................................................................................................................................................................................................................................181.000.00----------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................CCCCGCCCTCCCCCG.......................................................1501.001.00----------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................CCCCGCCCTCCCCCGTC.....................................................171.000.00--------------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................GAAGCTGCAGGAGTTCG.......1721.001.00---------------------------0.50---------------------------------------------0.50-----------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................GCAGGAGTTCGTCAACAA1811.001.00----------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................................................................................................................................CCCGCCCTCCCCCGTCCGC..................................................191.000.00--------------------------------------------1.00----------------------------------------------------------------------
...........................................................................................................CGGGGCAGGAGCGCGCC.............................................................................................................................................................................................................................................................171.000.00--------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CCAGGCCTCACGCCCCATAC................................................................................................201.000.00---------------------------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................GCCCCCGCCCTCCCCTGGA.....................................................191.000.00--1.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................GAGCTCTGGGGTGTTCGAACTGAAGCTGCAGGA............3311.001.00-------------------1.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................ACGGGCCGCGCCAGCGTGG.......................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------1.00-------------------------------------------------
...............TGGCCCTGGCGGTGCG..........................................................................................................................................................................................................................................................................................................................................................161.000.00------1.00------------------------------------------------------------------------------------------------------------
.....................................CTTGCTGTGTCAGGTAGGG.................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................CCCACCCAGGCCTCACCCCC.....................................................................................................201.000.00-----------------------------------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CGAACTGAAGCTGCAGGAGTTCG.......2311.001.00------------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................TGAAGCTGCAGGAGTTCGTCA....2111.001.00-------------------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................GCCCCCGCCCTCCCCCCCCG....................................................201.000.00------------------1.00------------------------------------------------------------------------------------------------
...........................................................................GGCCCCGCGGGGTCTCTC............................................................................................................................................................................................................................................................................................181.000.00------------------------------------------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................GGTGTTCGAACTGAAGCTGCAGGAGTTA........281.000.00----------------------------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGGGGCGACGACCCATTC...................................................................................................................................................................................191.000.00--------------------------------1.00----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................GTGTTCGAACTGAAGC...................1620.500.50------------------------------------------------------------------------0.50------------------------------------------
...........................................................................................................................................................................................................................................................................................................CCTCACGCCCCCGCCC..............................................................1630.330.33-----------------------------------------------------------------------------0.33-------------------------------------
......................................................................GCCGCGGCCCCGCGGGG..................................................................................................................................................................................................................................................................................................1730.330.33--0.33----------------------------------------------------------------------------------------------------------------
.......................................................................CCGCGGCCCCGCGGG...................................................................................................................................................................................................................................................................................................1580.250.25--0.12---0.12------------------------------------------------------------------------------------------------------------
..............................................................................................................................GAGGGGCGGACAGCGGC..........................................................................................................................................................................................................................................1780.120.12-------------------------------------------------------------------------------0.12-----------------------------------

Antisense strand
GCAGTCGGTGCGCGCTGGCCCTGGCGGTGCTCTCGGCCTTGCTGTGTCAGGTAGGCGGGCAGGTGGGGGCGCCGCGGCCCCGCGGGGTCTCACGGGTAGCCGGGGCGCGGGGCAGGAGCGCGCGGGGAGGGGCGGACAGCGGCACGGGCCGCGCCAGCCACGGCCCGGAAGATGAATCCCGGGGGCGACGACCCCAGCGCCGGCCGTGCAGCGAGCGCGCTCGGCCCCTGAGCCCTTCCAGGCTCTCCGCACACCCCCCACCCAGGCCTCACGCCCCCTAGCTCGGGCGGGACCCGCGTCCTCACGCCCCCGCCCTCCCCCGTGCAGGTCTGGAGCTCTGGGGTGTTCGAACTGAAGCTGCAGGAGTTCGTCAACAA
.....................................................................................................................................................................................................................................(((((......)))))...((((............(((.....))).........(((((((....((((....)))).)))))))......))))....................................................
...................................................................................................................................................................................................................................228................................................................................................327................................................
SizePerfect hitTotal NormPerfect NormSRR040032(GSM532917)
G603N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
SRR040018(GSM532903)
G701N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040040(GSM532925)
G612N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040015(GSM532900)
G623T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532881(GSM532881)
G696N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR189783GSM532880(GSM532880)
G659T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040006(GSM532891)
G601N. (cervix)
SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
........................................................................CGCGGCCCCGCGGGGCCGG.............................................................................................................................................................................................................................................................................................. 1912.110.00-0.110.22-0.11-0.222.56------0.33-0.56--------0.780.67-0.110.220.110.11-0.110.110.110.110.11-0.110.11-------------------------0.220.33-0.22-0.56----0.44-0.44--0.330.110.330.22----0.110.11-0.110.22-----0.110.110.110.110.110.11---0.110.110.110.110.110.110.11
..................................................................GGGCGCCGCGGCCCCGCCG.................................................................................................................................................................................................................................................................................................... 192.000.00---------------------2.00---------------------------------------------------------------------------------------------
.......................................................................................................GGCGCGGGGCAGGAGTT................................................................................................................................................................................................................................................................. 172.000.00-----------------------2.00-------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGCCG............................................................................................................................................................................................................................................................................................... 181.560.00-------0.670.11-----0.22---------------0.110.11--------------------------------------------------0.11-0.11---------------------0.11--------
.....................................................................................................................GCGCGCGGGGAGGGGCGGGCC............................................................................................................................................................................................................................................... 211.500.00---------------0.50--------------------------------------------------0.50-0.50----------------------------------------------
.......................................................................CCCGCGGGGCCGCGG................................................................................................................................................................................................................................................................................................... 1581.501.50--0.38---0.12---------0.12-------------0.12-0.12----------------------------------0.25-0.12----------------0.12-----------0.12----------------
.......................................................................CCCCGCGGGGCCGCGG.................................................................................................................................................................................................................................................................................................. 1641.501.50------0.25---------------------0.25--------------------------------------0.25-----------0.250.25------0.25---------------------------
...................................................................................................................................................................................................................................................................................................................................GCAGGTCTGGAGCTCTGGGCAT................................ 221.000.00---------------------------------------------1.00---------------------------------------------------------------------
................................................................GGGGGCGCCGCGGCCCCGGGG.................................................................................................................................................................................................................................................................................................... 211.000.00------------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................CGCCCTCCCCCGTGCAATA................................................ 191.000.00--------------------------------------------------1.00----------------------------------------------------------------
.....................................................................CCCCGCGGGGCCGCGGCG.................................................................................................................................................................................................................................................................................................. 1811.001.00-------------------------------------------1.00-----------------------------------------------------------------------
...................................................................CCCGCGGGGCCGCGGCGCC................................................................................................................................................................................................................................................................................................... 1911.001.00----------------1.00--------------------------------------------------------------------------------------------------
.....................................................................CGCCGCGGCCCCGCGGGGCTG............................................................................................................................................................................................................................................................................................... 211.000.00---------------------------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGGACCCGCGTCCTCGCG....................................................................... 191.000.00------------------------------------------------------1.00------------------------------------------------------------
.....................................................................................................................GCGCGCGGGGAGGGGCGGAG................................................................................................................................................................................................................................................ 201.000.00----------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................CCTCACGCCCCCGCCCCA............................................................ 1831.000.00----------------------------------------------1.00--------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGTCCGG............................................................................................................................................................................................................................................................................................. 201.000.00------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTCCAGGCTCTCCGCACCCG.......................................................................................................................... 211.000.00----------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................GCGCGCGGGGAGGGGCGGAGCAG............................................................................................................................................................................................................................................. 231.000.00----------1.00--------------------------------------------------------------------------------------------------------
....................................CCTTGCTGTGTCAGGAG.................................................................................................................................................................................................................................................................................................................................... 171.000.00-------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................GCCCCCGCCCTCCCCCGCC..................................................... 191.000.00--------------------------------------------------------------1.00----------------------------------------------------
..................................................................................CGGGGTCTCACGGGTGCCG.................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CCCCCGCCCTCCCCCGTG..................................................... 181.000.00----------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................GACCCCAGCGCCGGCAGAA......................................................................................................................................................................... 191.000.00-----------------------------------------------------------1.00-------------------------------------------------------
.................................................................GGGGCGCCGCGGCCCCG....................................................................................................................................................................................................................................................................................................... 171.000.00--1.00----------------------------------------------------------------------------------------------------------------
.....................................................................CGCCGCGGCCCCGCGGGGGG................................................................................................................................................................................................................................................................................................ 201.000.00-----------------------------1.00-------------------------------------------------------------------------------------
..................................................................GGGCGCCGCGGCCCCGGGG.................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................CGCCCCTCCCCGCGCGC................................................................................................................................................................................................................................................... 1760.500.50-------------------------------------------------------------------------------------0.170.17---------0.17------------------
........................AGGCCGAGAGCACCG.................................................................................................................................................................................................................................................................................................................................................. 1520.500.50---------------------------------------------------------------------------0.50---------------------------------------
.....................................................................................................................CCGCCCCTCCCCGCGCGC.................................................................................................................................................................................................................................................. 1820.500.50--------------------------------------------------------------------------0.50----------------------------------------
.......................................................................CCGCGGCCCCGCGGGGGC................................................................................................................................................................................................................................................................................................ 180.500.00----------------0.25-------------------------------------------------0.25------------------------------------------------
.....................................................................................................................GCGCGCGGGGAGGGGCGGGCCG.............................................................................................................................................................................................................................................. 220.500.00----------------0.50--------------------------------------------------------------------------------------------------
.......................................................................CCGCGGCCCCGCGGGT.................................................................................................................................................................................................................................................................................................. 1680.380.00-----------------------------0.12-------------------------------------------------------0.12----0.12------------------------
...................................................................CGGGGCCGCGGCGCC....................................................................................................................................................................................................................................................................................................... 1590.330.33--------------------------------------0.11-----------------------------------------0.11----------0.11-----------------------
......................................................................................................................CCGCCCCTCCCCGCGCG.................................................................................................................................................................................................................................................. 1730.330.33----------------------------------------------------------------------0.33--------------------------------------------
.......................................................................CCGCGGCCCCGCGGGTT................................................................................................................................................................................................................................................................................................. 1780.250.00---------------------------------------------------------------------0.25---------------------------------------------
.......................................................................CCGCGGCCCCGCGGGGGG................................................................................................................................................................................................................................................................................................ 180.250.00----------------------------------------------------------------------0.25--------------------------------------------
.......................................................................CCGCGGCCCCGCGGGGC................................................................................................................................................................................................................................................................................................. 1780.250.00-------------------------------------------------------------------------------------------0.120.12----------------------
...............................................................................................................................................................................................................................................................................................................GGGGGAGGGCGGGGGCGT........................................................ 1840.250.25----------------------------------------------------------------------------------------0.25--------------------------
........................................................................CCCCGCGGGGCCGCG.................................................................................................................................................................................................................................................................................................. 1590.220.22-------------------------------------------------------------------0.11---------0.11-------------------------------------
...................................................................................................................................................................................................................................................................GCGTGAGGCCTGGGT....................................................................................................... 1550.200.20----------------------------------------------------------------------------------------------0.20--------------------
.....................................................................................................................GCGCGCGGGGAGGGGCGCGAC............................................................................................................................................................................................................................................... 210.170.00-----------------------------------------------------------------------------------------------0.17-------------------
.......................................................................CCGCGGCCCCGCGGGTTC................................................................................................................................................................................................................................................................................................ 1880.120.00-------------------------------------------------------------------------------------------------0.12-----------------
.......................................................................CCGCGGCCCCGCGGGGG................................................................................................................................................................................................................................................................................................. 1780.120.00-----------------------------------------------------------------------------------------0.12-------------------------
.......................................................................CCGCGGCCCCGCGGGGGGG............................................................................................................................................................................................................................................................................................... 1980.120.00--0.12----------------------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGCCGT.............................................................................................................................................................................................................................................................................................. 190.110.00---------------------------------------------------------------------------------------------------------0.11---------
........................................................................CGCGGCCCCGCGGGGCCAG.............................................................................................................................................................................................................................................................................................. 190.110.00--0.11----------------------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGCACG.............................................................................................................................................................................................................................................................................................. 190.110.00-----------------------------------------------------------------------------------------------------------0.11-------
........................................................................CGCGGCCCCGCGGGGACG............................................................................................................................................................................................................................................................................................... 180.110.00--------------0.11----------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGCCCG.............................................................................................................................................................................................................................................................................................. 190.110.00--------------0.11----------------------------------------------------------------------------------------------------
........................................................................CGCGGCCCCGCGGGGACGG.............................................................................................................................................................................................................................................................................................. 190.110.00--------------------------------------------------------------------0.11----------------------------------------------
........................................................................CGCGGCCCCGCGGGGCCGC.............................................................................................................................................................................................................................................................................................. 190.110.00----------------------------------------------------------------------------------0.11--------------------------------