uc003qxg.1_intron_0_0_chr6_170151760

CATATTTGAGAACATTTATGTAAATTATCTTTAATATTTAATCACTATGTTTTAATCATACAGCTCTCACGATATCCAGAAAGCATGTTAACAGCAACTATACCTGAGTGCATTCAGTTCTTAAGAGATGTGTCTGAAATATATAATACTCTATTTTTCTTTCTGTTAAGCAGTGCCTTTTATTTTATTTTATTTTTTAGGTATTAATAGGGGACCCTATTACCACATGTCTTTCTCCCTCAGTGTATGA .............................................................................((((.((((.(((((((.........(((((....)))))......((((((((((.....))))))....))))..........)))))))...)))).))))..................................................................... ........................................................57.............................................................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line)	SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line)	SRR553576(SRX182782) source: Testis. (testes)	TAX577744(Rovira) total RNA. (breast)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTTAG.................................................	26		11.00	0.00	4.00	3.00	3.00	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTAG..................................................	25	1	7.00	7.00	4.00	-	2.00	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTAG..................................................	24		6.00	0.00	2.00	1.00	-	-	3.00	-	-	-	-	-	-	-	-	-
....................TAAATTATCTTTAATATTTAATCACTATG.........................................................................................................................................................................................................	29	1	5.00	5.00	1.00	-	3.00	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCCAG................................................	26		3.00	0.00	2.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTATG.................................................	25		3.00	0.00	1.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTTAGG.................................................	31	1	2.00	2.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTCTAG....................................................	22		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTCC......................................................	20		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTCCAG....................................................	22		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTTAG..................................................	30	1	2.00	2.00	-	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTTTTG................................................	27		2.00	0.00	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTCAG..................................................	30		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................AGCTCTCACGATATCCAGAAAGCA.....................................................................................................................................................................	24	1	1.00	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTATTG...................................................	24		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................TATTTTTCTTTCTGTTAAGCAG.............................................................................	22	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTCG...................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCTT..................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTCTG.....................................................	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTCTTG..................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................AATATATAATACTCTATTTTTCTTTCCG.....................................................................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................ATATATAATACTCTATTTTTCTTTCTG.....................................................................................	27	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCAAG................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................AGAGATGTGTCTGAAATATATAAT.......................................................................................................	24	1	1.00	1.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...............................................TGTTTTAATCATACAGCTCTCACGATATA..............................................................................................................................................................................	29		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTA....................................................	28		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTAAGCAGTGCCTTTTATTTTA...............................................................	22	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTCCA.....................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCACT................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................ATGTTTTAATCATACAGCTCTCA.....................................................................................................................................................................................	23	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCAG..................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTCCG....................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTTG..................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................GTGTCTGAAATATATAATACTCTATT...............................................................................................	26	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.......................................................................................................................................................TATTTTTCTTTCTGTTATTT...............................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTCTAA..................................................	30		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................TTTTATTTTATTTTTTAGGGACT.............................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTCATA...................................................	26		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTAAGCAGTGCCTTTTATTTTATTTTATT........................................................	29	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTATGA................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTAG.....................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................GCCTTTTATTTTATTTTATTTTTTTG..................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTCAGG.................................................	26		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ACCACATGTCTTTCTCAC...........	18		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
...............................................................................................................................................................................CCTTTTATTTTATTTTATTTCCTT...................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTTATTG..................................................	27		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTTTCAGG.................................................	28		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.................................................................................................................................................ATACTCTATTTTTCTTTCTTG....................................................................................	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CAGTGCCTTTTATTTTA...............................................................	17	3	0.67	0.67	-	-	-	0.67	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................TGTCTGAAATATATAATACT....................................................................................................	20	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	0.50
................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTAG..................................................	24	3	0.33	0.33	-	-	0.33	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................AGTGCCTTTTATTTTAT..............................................................	17	5	0.20	0.20	-	-	-	0.20	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTATTTTATTTTATTTTTTAGG.................................................	23	7	0.14	0.14	-	-	-	-	-	0.14	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................TTTTATTTTTTAGGTATT.............................................	18	8	0.12	0.12	-	-	-	0.12	-	-	-	-	-	-	-	-	-	-

CATATTTGAGAACATTTATGTAAATTATCTTTAATATTTAATCACTATGTTTTAATCATACAGCTCTCACGATATCCAGAAAGCATGTTAACAGCAACTATACCTGAGTGCATTCAGTTCTTAAGAGATGTGTCTGAAATATATAATACTCTATTTTTCTTTCTGTTAAGCAGTGCCTTTTATTTTATTTTATTTTTTAGGTATTAATAGGGGACCCTATTACCACATGTCTTTCTCCCTCAGTGTATGA
.............................................................................((((.((((.(((((((.........(((((....)))))......((((((((((.....))))))....))))..........)))))))...)))).)))).....................................................................
........................................................57.............................................................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR553576(SRX182782)
source: Testis. (testes)

TAX577744(Rovira)
total RNA. (breast)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTTAG.................................................

11.00

0.00

4.00

3.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTAG..................................................

7.00

4.00

2.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTAG..................................................

6.00

0.00

2.00

1.00

3.00

....................TAAATTATCTTTAATATTTAATCACTATG.........................................................................................................................................................................................................

5.00

1.00

3.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCCAG................................................

3.00

0.00

2.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTATG.................................................

3.00

0.00

1.00

2.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTTAGG.................................................

2.00

................................................................................................................................................................................CTTTTATTTTATTTTATTCTAG....................................................

2.00

0.00

2.00

................................................................................................................................................................................CTTTTATTTTATTTTATTCC......................................................

2.00

0.00

2.00

................................................................................................................................................................................CTTTTATTTTATTTTATTCCAG....................................................

2.00

0.00

2.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTTAG..................................................

2.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTTTTTG................................................

2.00

0.00

2.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTCAG..................................................

2.00

0.00

1.00

.............................................................AGCTCTCACGATATCCAGAAAGCA.....................................................................................................................................................................

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTATTG...................................................

1.00

0.00

1.00

.......................................................................................................................................................TATTTTTCTTTCTGTTAAGCAG.............................................................................

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTCG...................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCTT..................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTCTG.....................................................

1.00

0.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTCTTG..................................................

1.00

0.00

1.00

.........................................................................................................................................AATATATAATACTCTATTTTTCTTTCCG.....................................................................................

1.00

0.00

1.00

..........................................................................................................................................ATATATAATACTCTATTTTTCTTTCTG.....................................................................................

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCAAG................................................

1.00

0.00

1.00

...........................................................................................................................AGAGATGTGTCTGAAATATATAAT.......................................................................................................

1.00

...............................................TGTTTTAATCATACAGCTCTCACGATATA..............................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTTA....................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTAAGCAGTGCCTTTTATTTTA...............................................................

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTCCA.....................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTCACT................................................

1.00

0.00

1.00

..............................................ATGTTTTAATCATACAGCTCTCA.....................................................................................................................................................................................

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCAG..................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTCCG....................................................

1.00

0.00

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTTG..................................................

1.00

0.00

1.00

.................................................................................................................................GTGTCTGAAATATATAATACTCTATT...............................................................................................

1.00

.......................................................................................................................................................TATTTTTCTTTCTGTTATTT...............................................................................

1.00

0.00

1.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTATTTTATTTTCTAA..................................................

1.00

0.00

1.00

......................................................................................................................................................................................TTTTATTTTATTTTTTAGGGACT.............................................

1.00

0.00

1.00

.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTCATA...................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTAAGCAGTGCCTTTTATTTTATTTTATT........................................................

1.00

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTATGA................................................

1.00

0.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTAG.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................GCCTTTTATTTTATTTTATTTTTTTG..................................................

1.00

0.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTTTCAGG.................................................

1.00

0.00

1.00

.............................................................................................................................................................................................................................ACCACATGTCTTTCTCAC...........

1.00

0.00

1.00

...............................................................................................................................................................................CCTTTTATTTTATTTTATTTCCTT...................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTTATTG..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGCCTTTTATTTTATTTTATTTTTCAGG.................................................

1.00

0.00

1.00

.................................................................................................................................................ATACTCTATTTTTCTTTCTTG....................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................CAGTGCCTTTTATTTTA...............................................................

0.67

..................................................................................................................................TGTCTGAAATATATAATACT....................................................................................................

0.50

................................................................................................................................................................................CTTTTATTTTATTTTATTTTTTAG..................................................

0.33

...........................................................................................................................................................................AGTGCCTTTTATTTTAT..............................................................

0.20

..................................................................................................................................................................................TTTATTTTATTTTATTTTTTAGG.................................................

0.14

...........................................................................................................................................................................................TTTTATTTTTTAGGTATT.............................................

0.12