ID: uc003qvi.1_intron_2_0_chr6_167356578_r.3p
GENE: RNASET2(1)
chr6:167356528-167356777-


(5)
B-CELL 		(1)
BRAIN 		(7)
BREAST 		(6)
CELL-LINE 		(10)
CERVIX 		(2)
HEART 		(4)
LIVER 		(2)
OTHER 		(8)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
TTTATGATTACTCAAATTGCACTTGTAGATATATCTTAACAAACACTTCATACAAAATAAGCATAGGATTATTTTATTCACCAAAGTATTGTTAATTAGCAGAGCTCAATTCTTTGGTGTCAGTTTATCAAATTTACCTTCTAGGTTTTGAGTTTATTATTAAGAACCTGCGTAGACTTATTTTATTTTTTAATGCATAGGATCTTTTGCCAGAAATGAGGGCATACTGGCCTGACGTAATTCACTCGTT
.....................................................(((((((........)))))))...((((((((.((((......(((...))))))).))))))))...................................................................................................................................
..................................................51.......................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR189784SRR040025(GSM532910)
G613T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................TGTCAGTTTATCAAATACC..................................................................................................................1923.000.005.003.00-3.00------2.001.00---2.00--------1.001.00--1.00-1.00--1.00---1.00-1.00-------
.....................................................................................................................TGTCAGTTTATCAAATACCC.................................................................................................................208.000.002.002.00-1.00-------1.00--------------1.00--1.00-----------------
........................................................................TTTATTCACCAAAGTAGCTG..............................................................................................................................................................205.000.00--3.00-------------2.00------------------------------
.............................................................................................................................................................................................................................GCATACTGGCCTGACGTA...........1814.004.00-----2.00--------2.00--------------------------------
...............................................................................................................................................................................................................................ATACTGGCCTGACGTAAT.........1813.003.00-------3.00---------------------------------------
.......................................................................................................................................................................CTGCGTAGACTTATTT...................................................................1612.002.00-----------------2.00-----------------------------
...............ATTGCACTTGTAGATATATCTT.....................................................................................................................................................................................................................2212.002.00------------------2.00----------------------------
..............................................................................................................................................................................................................................CATACTGGCCTGACGTAATT........2012.002.00------2.00----------------------------------------
..................................................................................................................................................................AGAACCTGCGTAGACTTATTT...................................................................2112.002.00---------2.00-------------------------------------
............................................................................................................................................................................................................................GGCATACTGGCCTGACGTAATTCACT....2611.001.00--------------------1.00--------------------------
......................................................................................................................GTCAGTTTATCAAATACCC.................................................................................................................191.000.00-----------------------------------1.00-----------
.............AAATTGCACTTGTAGATA...........................................................................................................................................................................................................................1811.001.00-----------------------------------------1.00-----
...................................................................................................................................................................GAACCTGCGTAGACTTATTTTA.................................................................2211.001.00----1.00------------------------------------------
...............................................................................................................................................................................................................................ATACTGGCCTGACGTAATTCACTCGT.2611.001.00--------1.00--------------------------------------
.............................................................................................................................................................................................................................GCATACTGGCCTGACGTAA..........1911.001.00--------1.00--------------------------------------
..................................................................................................................................................................AGAACCTGCGTAGACTTATTTTATTT..............................................................2611.001.00----1.00------------------------------------------
...................................................................................................................................................................................................................AGAAATGAGGGCATACTGGCCTGAC..............2511.001.00------------------------------------------1.00----
...............................................................................................................................................................................ACTTATTTTATTTTTTCAAG.......................................................201.000.00--------------------------------------------1.00--
.................................................................................................................................................................AAGAACCTGCGTAGACTTATTTTATTT..............................................................2711.001.00---------------------------1.00-------------------
.............................................................................................................................................................................................................................GCATACTGGCCTGACGTAATTC.......2211.001.00---------1.00-------------------------------------
.................................................................................................................................................................AAGAACCTGCGTAGACTTATTTTA.................................................................2411.001.00----------------------1.00------------------------
.........................................................................TTATTCACCAAAGTAGCTG..............................................................................................................................................................191.000.00--1.00--------------------------------------------
.....................................................................................................................TGTCAGTTTATCAAATTCT..................................................................................................................191.000.00-1.00---------------------------------------------
.................................................................................................................................................................AAGAACCTGCGTAGACTTAT.....................................................................2011.001.00-------------------------------1.00---------------
........................................................................................................................................................................................................................TGAGGGCATACTGGCCTGACG.............2111.001.00-----------------------1.00-----------------------
......................................................................................................................................................................................................................AATGAGGGCATACTGGCCTGACG.............2311.001.00--------------------------------1.00--------------
.........................................................................................................................................................................................................................GAGGGCATACTGGCCTGACGTAATT........2511.001.00-------------------1.00---------------------------
..................................................................................................................................................................................................................CAGAAATGAGGGCATACTGGCCTGACGTAATT........3211.001.00------1.00----------------------------------------
.................................................................................................................................................................................................................................ACTGGCCTGACGTAATTCA......1911.001.00-----1.00-----------------------------------------
......................................................................................................................................................................................................AGGATCTTTTGCCAGAAATGAGGGCATACTG.....................3111.001.00------------------------------------1.00----------
..........................................................................................................................................................................................................................AGGGCATACTGGCCTGACGTAATT........2411.001.00---------------------1.00-------------------------
........................................................ATAAGCATAGGATTATTT................................................................................................................................................................................1811.001.00-------------1.00---------------------------------
.....................................................................................................................TGTCAGTTTATCAAACACC..................................................................................................................191.000.00----------------------------------------1.00------
................................................................................................................................................................................................................................TACTGGCCTGACGTAATTCACTC...2311.001.00--------1.00--------------------------------------
..............AATTGCACTTGTAGATATAT........................................................................................................................................................................................................................2011.001.00----1.00------------------------------------------
.................................................................................................................................................................................................................................ACTGGCCTGACGTAATT........1711.001.00----------------------------------1.00------------
............................................................................................................................................................................................................................GGCATACTGGCCTGACGTAATT........2211.001.00-------------1.00---------------------------------
.......................................................................................................................................................................................................................ATGAGGGCATACTGGCCA.................181.000.00--------------------------------------1.00--------
......................................................................................................................................................AGTTTATTATTAAGAAC...................................................................................1720.500.50----------------------------------------------0.50
...................................................ACAAAATAAGCATAGGAT.....................................................................................................................................................................................1820.500.50---------------------------------------------0.50-

Antisense strand
TTTATGATTACTCAAATTGCACTTGTAGATATATCTTAACAAACACTTCATACAAAATAAGCATAGGATTATTTTATTCACCAAAGTATTGTTAATTAGCAGAGCTCAATTCTTTGGTGTCAGTTTATCAAATTTACCTTCTAGGTTTTGAGTTTATTATTAAGAACCTGCGTAGACTTATTTTATTTTTTAATGCATAGGATCTTTTGCCAGAAATGAGGGCATACTGGCCTGACGTAATTCACTCGTT
.....................................................(((((((........)))))))...((((((((.((((......(((...))))))).))))))))...................................................................................................................................
..................................................51.......................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR189784SRR040025(GSM532910)
G613T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................TGTCAGTTTATCAAATGG................................................................................................................... 182.000.00------------2.00----------------------------------
................................................................................................................................................GTTTTGAGTTTATTAGA......................................................................................... 171.000.00-------------------------------------------1.00---