| (18) BREAST | (14) CELL-LINE | (26) CERVIX | (1) HELA | (2) LIVER | (1) OTHER | (7) SKIN |
| AAAATTAAGTACAATCCATTTGCAAAAGCTTTCCTTGATGCAAAGGAAAGGTGAGAGAATTCTAACTATAAATACCCTTGGGCAAAGAAGTATGCAGAAAGATGAAATATTGCTGCACATACTCTTTTCTGAATTTCCTTATTTTTGAAAATTCGATATACTTTTTTTTTTTCATTTTGATAGAAGTGATCACAAAGAGATGATGGAGGAACCCGGAGACAGCCAGCAACCTG .........................................................................................((((((((...((((...)))).)))))..))).................((((..((((((.................))))))....))))................................................... .........................................................................................90...........................................................................................183................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR040014(GSM532899) G623N. (cervix) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR040031(GSM532916) G013T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR040024(GSM532909) G613N. (cervix) | SRR040035(GSM532920) G001T. (cervix) | SRR040042(GSM532927) G428N. (cervix) | SRR040018(GSM532903) G701N. (cervix) | SRR040030(GSM532915) G013N. (cervix) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR191592(GSM715702) 59genomic small RNA (size selected RNA from t. (breast) | SRR191565(GSM715675) 92genomic small RNA (size selected RNA from t. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040025(GSM532910) G613T. (cervix) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040034(GSM532919) G001N. (cervix) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR191398(GSM715508) 35genomic small RNA (size selected RNA from t. (breast) | SRR040040(GSM532925) G612N. (cervix) | SRR040041(GSM532926) G612T. (cervix) | SRR191598(GSM715708) 79genomic small RNA (size selected RNA from t. (breast) | SRR444068(SRX128916) Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line) | SRR207117(GSM721079) Whole cell RNA. (cell line) | GSM532876(GSM532876) G547T. (cervix) | SRR191567(GSM715677) 46genomic small RNA (size selected RNA from t. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191554(GSM715664) 99genomic small RNA (size selected RNA from t. (breast) | SRR040029(GSM532914) G026T. (cervix) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR191576(GSM715686) 86genomic small RNA (size selected RNA from t. (breast) | SRR040016(GSM532901) G645N. (cervix) | SRR191407(GSM715517) 81genomic small RNA (size selected RNA from t. (breast) | SRR191588(GSM715698) 52genomic small RNA (size selected RNA from t. (breast) | SRR191606(GSM715716) 84genomic small RNA (size selected RNA from t. (breast) | SRR040036(GSM532921) G243N. (cervix) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR444067(SRX128915) Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line) | SRR191403(GSM715513) 44genomic small RNA (size selected RNA from t. (breast) | GSM532884(GSM532884) G871T. (cervix) | SRR037938(GSM510476) 293Red. (cell line) | SRR040017(GSM532902) G645T. (cervix) | SRR040038(GSM532923) G531N. (cervix) | SRR191595(GSM715705) 72genomic small RNA (size selected RNA from t. (breast) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR191564(GSM715674) 87genomic small RNA (size selected RNA from t. (breast) | SRR040012(GSM532897) G648N. (cervix) | SRR040032(GSM532917) G603N. (cervix) | SRR444053(SRX128901) Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | GSM532879(GSM532879) G659N. (cervix) | GSM532887(GSM532887) G761N. (cervix) | SRR191399(GSM715509) 36genomic small RNA (size selected RNA from t. (breast) | SRR040043(GSM532928) G428T. (cervix) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR444043(SRX128891) Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR191596(GSM715706) 73genomic small RNA (size selected RNA from t. (breast) | SRR040027(GSM532912) G220T. (cervix) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTTCAG..................................................... | 22 | 30.00 | 0.00 | 7.00 | 9.00 | 8.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTCAG..................................................... | 21 | 20.00 | 0.00 | 7.00 | 3.00 | 5.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTTATAG................................................... | 23 | 3.00 | 0.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTCAGC.................................................... | 22 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTTTGGT................................................... | 23 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................ATATACTTTTTTTTTTTAAAT......................................................... | 21 | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTCCGG.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTTTCG..................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................TATACTTTTTTTTTTTCAAG......................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................TATACTTTTTTTTTTTCACTG........................................................ | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCAACTG....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTCCTG..................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................CAGAAAGATGAAATAGGAG........................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ...........................................................................................................................................................ATATACTTTTTTTTTTTCTTA......................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................CTTTTTTTTTTTCATTTTGATC................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................CGATATACTTTTTTTTTTGTTC.......................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATCAG....................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTCCAG..................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTTATAT................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................ATACTTTTTTTTTTTCATTTG....................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................TATACTTTTTTTTTTTCATG......................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCACAGG....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................AAGAGATGATGGAGGACTG.................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................AGAGATGATGGAGGAGATA................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................TATACTTTTTTTTTTTCAACTG....................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTCAG...................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................ATACTTTTTTTTTTTCATTTGGGG.................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................TCTGAATTTCCTTATTTCTA...................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................CTGAATTTCCTTATTTCTA...................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................TACTTTTTTTTTTTCATTTCAGC.................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................ATACTTTTTTTTTTTCACG......................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTATAT.................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................ACTTTTTTTTTTTCATTTTG...................................................... | 20 | 6 | 0.17 | 0.17 | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAAATTAAGTACAATCCATTTGCAAAAGCTTTCCTTGATGCAAAGGAAAGGTGAGAGAATTCTAACTATAAATACCCTTGGGCAAAGAAGTATGCAGAAAGATGAAATATTGCTGCACATACTCTTTTCTGAATTTCCTTATTTTTGAAAATTCGATATACTTTTTTTTTTTCATTTTGATAGAAGTGATCACAAAGAGATGATGGAGGAACCCGGAGACAGCCAGCAACCTG .........................................................................................((((((((...((((...)))).)))))..))).................((((..((((((.................))))))....))))................................................... .........................................................................................90...........................................................................................183................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR040014(GSM532899) G623N. (cervix) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR040031(GSM532916) G013T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR040024(GSM532909) G613N. (cervix) | SRR040035(GSM532920) G001T. (cervix) | SRR040042(GSM532927) G428N. (cervix) | SRR040018(GSM532903) G701N. (cervix) | SRR040030(GSM532915) G013N. (cervix) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR191592(GSM715702) 59genomic small RNA (size selected RNA from t. (breast) | SRR191565(GSM715675) 92genomic small RNA (size selected RNA from t. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040025(GSM532910) G613T. (cervix) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040034(GSM532919) G001N. (cervix) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR191398(GSM715508) 35genomic small RNA (size selected RNA from t. (breast) | SRR040040(GSM532925) G612N. (cervix) | SRR040041(GSM532926) G612T. (cervix) | SRR191598(GSM715708) 79genomic small RNA (size selected RNA from t. (breast) | SRR444068(SRX128916) Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line) | SRR207117(GSM721079) Whole cell RNA. (cell line) | GSM532876(GSM532876) G547T. (cervix) | SRR191567(GSM715677) 46genomic small RNA (size selected RNA from t. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191554(GSM715664) 99genomic small RNA (size selected RNA from t. (breast) | SRR040029(GSM532914) G026T. (cervix) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR191576(GSM715686) 86genomic small RNA (size selected RNA from t. (breast) | SRR040016(GSM532901) G645N. (cervix) | SRR191407(GSM715517) 81genomic small RNA (size selected RNA from t. (breast) | SRR191588(GSM715698) 52genomic small RNA (size selected RNA from t. (breast) | SRR191606(GSM715716) 84genomic small RNA (size selected RNA from t. (breast) | SRR040036(GSM532921) G243N. (cervix) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR444067(SRX128915) Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line) | SRR191403(GSM715513) 44genomic small RNA (size selected RNA from t. (breast) | GSM532884(GSM532884) G871T. (cervix) | SRR037938(GSM510476) 293Red. (cell line) | SRR040017(GSM532902) G645T. (cervix) | SRR040038(GSM532923) G531N. (cervix) | SRR191595(GSM715705) 72genomic small RNA (size selected RNA from t. (breast) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR191564(GSM715674) 87genomic small RNA (size selected RNA from t. (breast) | SRR040012(GSM532897) G648N. (cervix) | SRR040032(GSM532917) G603N. (cervix) | SRR444053(SRX128901) Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | GSM532879(GSM532879) G659N. (cervix) | GSM532887(GSM532887) G761N. (cervix) | SRR191399(GSM715509) 36genomic small RNA (size selected RNA from t. (breast) | SRR040043(GSM532928) G428T. (cervix) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR444043(SRX128891) Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR191596(GSM715706) 73genomic small RNA (size selected RNA from t. (breast) | SRR040027(GSM532912) G220T. (cervix) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................TACTCTTTTCTGAATCCA................................................................................................ | 18 | 77.00 | 0.00 | - | - | - | - | - | 5.00 | 6.00 | 4.00 | 5.00 | 3.00 | 3.00 | 3.00 | 2.00 | 1.00 | 2.00 | 2.00 | 1.00 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | 1.00 | - | |
| .......................................................................................................................TACTCTTTTCTGAATCC................................................................................................. | 17 | 6.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TACTCTTTTCTGAATCTA................................................................................................ | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ......................................................................................................................ATACTCTTTTCTGAATCA................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................AGACAGCCAGCAACCTTG | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTTTTTCATTTTGCGGG.................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TACTCTTTTCTGAATTCC................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................CTCCGGGTTCCTCCA............... | 15 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |