| (1) BRAIN | (2) BREAST | (9) CELL-LINE | (1) CERVIX | (2) HEART | (1) LIVER | (3) OTHER | (2) SKIN | (1) XRN.ip |
| CATGTGGCTACCTAGCAAAAATGGATGTCTGATTTCAAATTAGTAATGGAGATGGAATTACTATGATTCTTTTGTTCCCTTTCTCTGTCTCTCGATATATGCCATTTATAAAATAGCTCTTATGCTTTTTATAAAATAATTATTGTTCTTGGTTAGGTGGTTTTTTTACTAAGCTCTTTTTTTCTTTTCTTAATAAATAGGTGGGAAATACACCAAGAGTGATTTCAAGGAGTATGAAAAAGAACAGGAT .....................................................(((((....((((((.................((((....)))).......(((((((((.(((......))))))))))))..)))))).))))).((((.(((((.....))))).))))........................................................................... ..................................................51.............................................................................................................................................194...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR189783 | SRR040016(GSM532901) G645N. (cervix) | TAX577579(Rovira) total RNA. (breast) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTGC............................................................ | 19 | 15.00 | 0.00 | 14.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTGCAG.......................................................... | 21 | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTTCTTTTCTTAATAACAAG.................................................. | 21 | 5.00 | 0.00 | - | - | 3.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTGC............................................................. | 18 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................TTGTTCTTGGTTAGGTGGTTTTTTCAC................................................................................. | 27 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AAGGAGTATGAAAAAGAAC..... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTGCAG........................................................... | 20 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTCTTTTCTTAATAACAAG.................................................. | 19 | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTCTTGC......................................................... | 22 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AAGGAGTATGAAAAAGAACAGGAT | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTTTTTTCTTTTCTTAATGGCT.................................................... | 22 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................AATTATTGTTCTTGGTTAGGTGGTTTTTAC................................................................................... | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCTTTTTTTCTTTTCTTAAG........................................................ | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................ACTATGATTCTTTTGTTTT............................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTCTTCCCC....................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................AATGGAGATGGAATTAG............................................................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................................................................................................................................................................AAATACACCAAGAGTGATTTCAAGG.................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................AATGGAGATGGAATTACTATGAT....................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTTTTTTTCTTTTCTTAGGC....................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCTTTTTTTCTTTTCTTGGCG....................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTCTAC.......................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................GCTCTTTTTTTCTTTGTTT........................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCTTTTTTTCTTTTCTTAGC........................................................ | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................TTCTTGGTTAGGTGGTTTTTACT.................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................AAGCTCTTTTTTTCTTTAAT............................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................TTTTTTTACTAAGCTCTGAA...................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................TAAAATAGCTCTTATGCTT........................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................TTGTTCTTGGTTAGGTGGTCTT...................................................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CTTATGCTTTTTATAACAT................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCTTTTTTTCTTTTCTTGGTT....................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AGCTCTTTTTTTCTTTTCTTTTGC....................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTCTTTTCTTAGCAG...................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................AAGCTCTTTTTTTCTTTGC............................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTTCTTTTCTTAATAATTTG.................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................AGGAGTATGAAAAAGAAC..... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ......................................................................................................................................................................................................................................AGTATGAAAAAGAACAGG.. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ....................................................................................................................................................................................................................................GGAGTATGAAAAAGAACA.... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .ATGTGGCTACCTAGC.......................................................................................................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| .....................................................................................................................................................................................................................................GAGTATGAAAAAGAACA.... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| CATGTGGCTACCTAGCAAAAATGGATGTCTGATTTCAAATTAGTAATGGAGATGGAATTACTATGATTCTTTTGTTCCCTTTCTCTGTCTCTCGATATATGCCATTTATAAAATAGCTCTTATGCTTTTTATAAAATAATTATTGTTCTTGGTTAGGTGGTTTTTTTACTAAGCTCTTTTTTTCTTTTCTTAATAAATAGGTGGGAAATACACCAAGAGTGATTTCAAGGAGTATGAAAAAGAACAGGAT .....................................................(((((....((((((.................((((....)))).......(((((((((.(((......))))))))))))..)))))).))))).((((.(((((.....))))).))))........................................................................... ..................................................51.............................................................................................................................................194...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR189783 | SRR040016(GSM532901) G645N. (cervix) | TAX577579(Rovira) total RNA. (breast) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................AATGGATGTCTGATTACTG.................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................TGGAGATGGAATTACATA.......................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................TGGAGATGGAATTACATAG......................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................GTAATTCCATCTCCATTA............................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTAAGAAAAGAAAAAAAGA........................................................ | 20 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - |