ID: uc003qli.1_intron_3_0_chr6_146243973_r.5p
GENE: SHPRH(4)
chr6:146244579-146244828-


(7)
CELL-LINE
(1)
HEART
(2)
LIVER
(1)
OTHER
(1)
SKIN

Sense strand
ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCTATGTCAGAGAAGTAAGAAAACAGGAAGAAAAAGTATCTACTCATAATTTTAAAAGCAAAGAAATCCTTGTATTTTCTAGTTTCTAATTTCTCATTATTACCGGCTTTTTTTCTCCATTCATAAACCTATACAGACACATTCATACTTCTTTTTTGCAGCCTTTTTTATTCACAGTTTATCAAAATGGTTATAGGTACTATAATTGGGTTTA
............................................................................................................................................((((..............(((....)))...((.....))...............))))...................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
..................................................................................................................................................................................TCATACTTCTTTTTTTTTG.....................................................19186.000.0070.0063.0029.0022.002.00-------
..................................................................................................................................................................................TCATACTTCTTTTTTTTAG.....................................................1923.000.002.002.0010.009.00--------
..................................................................................................................................................................................TCATACTTCTTTTTTTG.......................................................1715.000.001.003.004.006.001.00-------
..................................................................................................................................................................................TCATACTTCTTTTTTTCTG.....................................................194.000.00---4.00--------
..................................................................................................................................................................................TCATACTTCTTTTTTTCG......................................................183.000.00--3.00---------
..................................................................................................................................................................................TCATACTTCTTTTTTTTGG.....................................................192.000.001.001.00----------
..................................................................................................................................................................................TCATACTTCTTTTTTTCAG.....................................................191.000.00--1.00---------
.....................................................................................................................................................................................TACTTCTTTTTTGCACATT..................................................191.000.00--------1.00---
...........................................................................................................................................................................................TTTTTTGCAGCCTTTGCAT............................................191.000.00----1.00-------
................AGCAACAAACTGGCAAGCTTTCTA..................................................................................................................................................................................................................2411.001.00------1.00-----
....................................................................................................................................................................CTATACAGACACATTCATACTTCTTTTG..........................................................281.000.00--1.00---------
......................................................................................................................................ATTACCGGCTTTTTTTTTTT................................................................................................201.000.00-----1.00------
..................................................................................................................................................................................TCATACTTCTTTTTTTGGA.....................................................191.000.00-----1.00------
............................................AGAGAAGTAAGAAAACAGGAAGAA......................................................................................................................................................................................2411.001.00-----------1.00
..................................................................................................................................................................................TCATACTTCTTTTTTACTG.....................................................191.000.00---1.00--------
..................................................................................................................................................................................TCATACTTCTTTTTTAC.......................................................171.000.00--1.00---------
.....................................CTATGTCAGAGAAGTAAG...................................................................................................................................................................................................1811.001.00----------1.00-
..............................................................................................................................................CTTTTTTTCTCCATTCATAAACCTATACAG..............................................................................3011.001.001.00-----------
.........................................................................................................................................ACCGGCTTTTTTTCTCTCCT.............................................................................................201.000.00---------1.00--
..................................................................................................................................................................................TCATACTTCTTTTTTTATC.....................................................191.000.001.00-----------
..................................................................................................................................................................................TCATACTTCTTTTTTG........................................................1670.290.29--0.14-0.14-------
..................................................................................................................................................................................TCATACTTCTTTTTTGTTG.....................................................1970.140.290.14-----------

Antisense strand
ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCTATGTCAGAGAAGTAAGAAAACAGGAAGAAAAAGTATCTACTCATAATTTTAAAAGCAAAGAAATCCTTGTATTTTCTAGTTTCTAATTTCTCATTATTACCGGCTTTTTTTCTCCATTCATAAACCTATACAGACACATTCATACTTCTTTTTTGCAGCCTTTTTTATTCACAGTTTATCAAAATGGTTATAGGTACTATAATTGGGTTTA
............................................................................................................................................((((..............(((....)))...((.....))...............))))...................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
.........AACTACAAGCAACAACTA............................................................................................................................................................................................................................... 181.000.00-------1.00----
.......................................................AAAACAGGAAGAAAAAATAG............................................................................................................................................................................... 201.000.00-----1.00------
........................................................ACTTTTTCTTCCTGTTT................................................................................................................................................................................. 1790.110.11-----0.11------