ID: uc003qhu.2_intron_29_0_chr6_138644911_f
GENE: (30)
chr6:138644861-138645209+


(2)
BRAIN
(3)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(3)
LIVER
(1)
OTHER
(5)
SKIN

Sense strand
CCTGCTGTGCCCTGCAAGATGCGTTCTCTGCCACACTCAAGCCAGTGAAGGTACATCACTGGGAGGAAGCCCTCCCTGGCACAGTTCTAACCATCTTTAGCTCCTGATCCCTTACCATGTTGGGCACATGGGTTCTGCCTCCTCTGAGCAGGCAGTCTCACTTTAGATCTTGCAGAGAGTGAGAAAGAAGTTGCTGGGTCAGTACTTTTGTCTCAGACACAGTGACGATCTCAGATCCAAGACTGAGCCCGGCCCATGAACCAGGATGCATTCAGTGAGCATCTGCTGTTTCTCCCCAGGACCTGCTGGGCTGCTTCCACAGCGGCACGGAGAGCTTCAGCGGGGAAGG
................................................................................................................................................................................((.(((((.....((..(((.(((((.((....))))..))).)))..))..)))))..))................................................................................................................
.......................................................................................................................................................................168....................................................................239............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR343335SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................................................................ACAGTGACGATCTCAAG..................................................................................................................1746.000.0024.0022.00----------------------
..........................................................................................................................................................................................................................ACAGTGACGATCTCAAA..................................................................................................................172.000.00-2.00----------------------
.....................................................................................................................................................................................................................CAGACACAGTGACGATC.......................................................................................................................1712.002.00--2.00---------------------
............................................................................................................................................................................CAGAGAGTGAGAAAGGCAT..............................................................................................................................................................191.000.00----------1.00-------------
............TGCAAGATGCGTTCTCTGCCACACTCAA.....................................................................................................................................................................................................................................................................................................................2811.001.00---------1.00--------------
..............................................................................................................................................................................................................................................................................................................CTGCTGGGCTGCTTCCACAGCGGC.......................2411.001.00-------1.00----------------
...........................................................................................................................................................................................................................CAGTGACGATCTCAGAGC................................................................................................................181.000.00------1.00-----------------
........................................................................................................................................................................................................................................................................................ATCTGCTGTTTCTCCAAA...................................................181.000.00--------1.00---------------
...............................................................................................................................................................................................................................................................................................................................CAGCGGCACGGAGAGTTAA...........191.000.00---1.00--------------------
................AGATGCGTTCTCTGCCACACTCAAGCC..................................................................................................................................................................................................................................................................................................................2711.001.00---------------1.00--------
.................................................................................................................................................................................................................................................................................................................................GCGGCACGGAGAGCTTCAGCGGGG....2411.001.00----1.00-------------------
........................................................................................................................................................................................................................................................CCGGCCCATGAACCA......................................................................................1540.750.75-------------------0.25-0.25-0.25
.......................................................................................................................................................................................................................................................CCCGGCCCATGAACCA......................................................................................1630.330.33------------------0.33-----

Antisense strand
CCTGCTGTGCCCTGCAAGATGCGTTCTCTGCCACACTCAAGCCAGTGAAGGTACATCACTGGGAGGAAGCCCTCCCTGGCACAGTTCTAACCATCTTTAGCTCCTGATCCCTTACCATGTTGGGCACATGGGTTCTGCCTCCTCTGAGCAGGCAGTCTCACTTTAGATCTTGCAGAGAGTGAGAAAGAAGTTGCTGGGTCAGTACTTTTGTCTCAGACACAGTGACGATCTCAGATCCAAGACTGAGCCCGGCCCATGAACCAGGATGCATTCAGTGAGCATCTGCTGTTTCTCCCCAGGACCTGCTGGGCTGCTTCCACAGCGGCACGGAGAGCTTCAGCGGGGAAGG
................................................................................................................................................................................((.(((((.....((..(((.(((((.((....))))..))).)))..))..)))))..))................................................................................................................
.......................................................................................................................................................................168....................................................................239............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR343335SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................TCCCTGGCACAGTTCTATAC................................................................................................................................................................................................................................................................. 201.000.00-----------1.00------------
........................................................................TCCCTGGCACAGTTCTTTTA................................................................................................................................................................................................................................................................. 201.000.00-------------1.00----------
...................................................................................................GCTCCTGATCCCTTAAAAC....................................................................................................................................................................................................................................... 191.000.00--------------1.00---------
...................................................................................................................................................................................................................CTCAGACACAGTGACCCT........................................................................................................................ 181.000.00----------------1.00-------
........................................................................TCCCTGGCACAGTTCTTT................................................................................................................................................................................................................................................................... 181.000.00-----1.00------------------
.......................................................................CTCCCTGGCACAGTTCTTTC.................................................................................................................................................................................................................................................................. 201.000.00------------1.00-----------
........................................................................TCCCTGGCACAGTTCTCATA................................................................................................................................................................................................................................................................. 201.000.00-----------------1.00------
..............................................................................TGGTTAGAACTGTGC................................................................................................................................................................................................................................................................ 1540.250.25----------------------0.25-
...............................................................................................................................................................................................................................................................................................AGGTCCTGGGGAGAAAC............................................. 1740.250.25--------------------0.25---