ID: uc003qhi.2_intron_1_0_chr6_137325898_r.3p
GENE: (1)
chr6:137325848-137326097-


(1)
BRAIN 		(10)
CELL-LINE 		(2)
CERVIX 		(2)
HEART 		(1)
OTHER 		(6)
SKIN

Sense strand
TTGTCAGGGAGAGTAAGAATTCTGAGACCGCTTATAACATTTAGCTTAAGCTTCTCAACGTAGAGGTGAGAAAACTGAGTTCCCAAATGTAAGTGATCTGCACAGAAGCAGCTTAACGATACGAGGTTTTTCCCATCACATCAAATCACAACTATCTAATCCCTTCCCCCGAATTCCCACCTTTTTTTTTTTTTTTACAGATCAATCATCAGAGTTCAAGGCTAAAATCATCTTCTGGTATGTTTTGCCC
.............................................................(((((((.(((...((......)).......(((((((((......))))......(((..((((......)).))..)))..)))))........................))).)))))))..................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATAG..................................................2480.000.0045.0014.0010.009.00-1.001.00-----------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTATAG....................................................2263.000.0032.0013.0016.002.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTATAG......................................................2062.000.0030.0013.0013.006.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTATAG.......................................................1939.000.0018.005.008.008.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTAAAG..................................................2416.000.004.005.004.003.00--------------------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTACGG..................................................218.000.003.004.00-1.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTATAT.....................................................217.000.004.003.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTATAT....................................................227.000.002.002.00-3.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATG...................................................234.000.002.001.001.00---------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTAAAAG.................................................254.000.003.00-1.00---------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACTTGG................................................244.000.00-3.00-1.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATAT..................................................243.000.001.001.001.00---------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATAA..................................................243.000.001.00-1.001.00--------------------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTACCG..................................................213.000.00-3.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTATGG....................................................223.000.001.00-1.001.00--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTATTTT.................................................232.000.002.00-----------------------
.................................................................................................................................................................................CACCTTTTTTTTTTTTTTTATAG..................................................232.000.001.00--1.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTATTG.....................................................212.000.002.00-----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTACAG..................................................2422.002.00--1.001.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATGG..................................................242.000.001.00-1.00---------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACTTTT................................................242.000.00--1.001.00--------------------
.................................................................................................................................................................................CACCTTTTTTTTTTTTTTTATG...................................................222.000.00-2.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTATTG....................................................222.000.00-1.00-1.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTACAG.....................................................212.000.00--2.00---------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTATTAC.................................................231.000.001.00-----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTACT...................................................231.000.00-1.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATAAG.................................................251.000.00-----1.00------------------
.......................................................CAACGTAGAGGTGAGAAAACTGA............................................................................................................................................................................2311.001.00--------------1.00---------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTACAATTG...............................................241.000.00-----1.00------------------
..........................................................................................................................................CATCAAATCACAACTATCTAAAC.........................................................................................231.000.00-----------1.00------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTCGG...................................................231.000.001.00-----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATA...................................................231.000.001.00-----------------------
...............................................................................................................................................................................CCCACCTTTTTTTTTTTTTTTAACCT.................................................261.000.00-----1.00------------------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTACTGG.................................................221.000.00---1.00--------------------
................................................................................................................................................................................CCACCTTTTTTTTTTATAT.......................................................191.000.00---1.00--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACCCAT................................................241.000.00-1.00----------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACTATG................................................241.000.00--1.00---------------------
................................................................................................................................................................................CCACCTTTTTTTTTTACAG.......................................................191.000.00---1.00--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACCAG.................................................231.000.00-1.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTCCG...................................................231.000.00-1.00----------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACAATA................................................241.000.001.00-----------------------
.................................................................................................................................................................................CACCTTTTTTTTTTTTTTTATTTG.................................................241.000.00---1.00--------------------
.................................................................................................................................................................................CACCTTTTTTTTTTTTTTTATTTT.................................................241.000.00------1.00-----------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACCCAG................................................241.000.00---1.00--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTATATT.................................................231.000.00-1.00----------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACCTTG................................................241.000.00---1.00--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTATTTC.................................................231.000.00-----1.00------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTATGT..................................................241.000.001.00-----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTATAA.....................................................211.000.001.00-----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTTTTTAAAGG.................................................251.000.00-----1.00------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACTTCC................................................241.000.00----------1.00-------------
.............................................................................................................................................................................TTCCCACCTTTTTTTTTCGG.........................................................201.000.00------1.00-----------------
................................................................................................................................................................................CCACCTTTTTTTTTTTAGAG......................................................201.000.00-1.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTATAA.......................................................191.000.00-1.00----------------------
................................................................................................................................................................................CCACCTTTTTTTTTTTACG.......................................................191.000.00-1.00----------------------
..............................................................................................................................................................................TCCCACCTTTTTTTTTTTTTTTAAG...................................................251.000.00--1.00---------------------
..............................................................................................................................................................................TCCCACCTTTTTTTTTTAAG........................................................201.000.00--1.00---------------------
.......GGAGAGTAAGAATTCTG..................................................................................................................................................................................................................................1720.500.50---------------------0.50--
..................................................................................................................................................................CTTCCCCCGAATTCCC........................................................................1620.500.50--------------------0.50---
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACAGGGG...............................................2550.400.40------0.40-----------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACAGTGG...............................................2550.400.40------0.40-----------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACAG..................................................2250.400.400.20--0.20--------------------
..................................................................................................................................................................................ACCTTTTTTTTTTTTTTTACAGA.................................................2330.330.33----------0.33-------------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTACAG..................................................2190.110.110.11-----------------------

Antisense strand
TTGTCAGGGAGAGTAAGAATTCTGAGACCGCTTATAACATTTAGCTTAAGCTTCTCAACGTAGAGGTGAGAAAACTGAGTTCCCAAATGTAAGTGATCTGCACAGAAGCAGCTTAACGATACGAGGTTTTTCCCATCACATCAAATCACAACTATCTAATCCCTTCCCCCGAATTCCCACCTTTTTTTTTTTTTTTACAGATCAATCATCAGAGTTCAAGGCTAAAATCATCTTCTGGTATGTTTTGCCC
.............................................................(((((((.(((...((......)).......(((((((((......))))......(((..((((......)).))..)))..)))))........................))).)))))))..................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................TTTTTTTTTTTTTTTACAGATTGT............................................. 243.000.00----3.00-------------------
...........................................................................................................................................................................................TTTTTTTTTACAGATCG.............................................. 172.000.00----2.00-------------------
......................................................................................................................................................................................................................TTCAAGGCTAAAATCATCTC................ 202.000.00--------2.00---------------
......................................................................................................................................................................................TTTTTTTTTTTTTTACAGATGATG............................................ 242.000.00----2.00-------------------
......................................................................................................................................................................................................................................TCTTCTGGTATGTTTGTT.. 182.000.00-------2.00----------------
.............................................................AGAGGTGAGAAAACTGCACG......................................................................................................................................................................... 201.000.00------------------1.00-----
...............AGAATTCTGAGACCGCTTATG...................................................................................................................................................................................................................... 211.000.00-------------------1.00----
.................................................................................................................................................................................................................TTAGCCTTGAACTCTG......................... 1631.001.00---------0.33------------0.330.33
........................................................................................................................................................TATCTAATCCCTTCCCCCGAAA............................................................................ 221.000.00---------------1.00--------
.....................................................................................................................................................................................................................................ATCTTCTGGTATGTTAACC.. 191.000.00------------1.00-----------
...............AGAATTCTGAGACCGCTG......................................................................................................................................................................................................................... 181.000.00---------1.00--------------
...........................................................................................................................................................CTAATCCCTTCCCCCGGGC............................................................................ 191.000.00-------------1.00----------
.................................................................................................................................................TCACAACTATCTAATCCGTTT.................................................................................... 211.000.00-----------------1.00------
.........................................................................................................................................................................................TTTTTTTTTTTACAGATTGT............................................. 201.000.00----1.00-------------------
.............................................................................................................................................................................................TTTTTTTACAGATCAATGCA......................................... 201.000.00----------------1.00-------
........................................................................................................................................................................................TTTTTTTTTTTTACAGATGATG............................................ 221.000.00----1.00-------------------
....................................................................................................................................................................................ATCTGTAAAAAAAAAAAAAAAG................................................ 2280.120.12----0.12-------------------